RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 ADGRB1O14514 1584 aa32.32■■■□□ 2.76
UBA3-206ENST00000464605 PLEKHH1Q9ULM0 1364 aa32.31■■■□□ 2.76
UBA3-206ENST00000464605 SIRT1Q96EB6 747 aa32.29■■■□□ 2.76
UBA3-206ENST00000464605 C1orf167Q5SNV9 1468 aa32.28■■■□□ 2.76
UBA3-206ENST00000464605 NHSL1Q5SYE7 1610 aa32.27■■■□□ 2.76
UBA3-206ENST00000464605 CDC42BPGQ6DT37 1551 aa32.26■■■□□ 2.75
UBA3-206ENST00000464605 POTEAQ6S8J7 498 aa32.24■■■□□ 2.75
UBA3-206ENST00000464605 DLC1Q96QB1 1528 aa32.22■■■□□ 2.75
UBA3-206ENST00000464605 SIN3AQ96ST3 1273 aa32.21■■■□□ 2.75
UBA3-206ENST00000464605 SPATA31A6Q5VVP1 1343 aa32.21■■■□□ 2.75
UBA3-206ENST00000464605 KIAA1210Q9ULL0 1709 aa32.18■■■□□ 2.74
UBA3-206ENST00000464605 ORAI2Q96SN7 254 aa32.17■■■□□ 2.74
UBA3-206ENST00000464605 LRP6O75581 1613 aa32.17■■■□□ 2.74
UBA3-206ENST00000464605 FMN2Q9NZ56 1722 aa32.17■■■□□ 2.74
UBA3-206ENST00000464605 DDX17Q92841 729 aaKnown RBP32.15■■■□□ 2.74
UBA3-206ENST00000464605 PRAM1Q96QH2 718 aa32.15■■■□□ 2.74
UBA3-206ENST00000464605 SHPRHQ149N8 1683 aa32.15■■■□□ 2.74
UBA3-206ENST00000464605 RGPD8O14715 1765 aaPredicted RBP32.13■■■□□ 2.73
UBA3-206ENST00000464605 TRAK1Q9UPV9 953 aa32.13■■■□□ 2.73
UBA3-206ENST00000464605 L3MBTL2Q969R5 705 aa32.12■■■□□ 2.73
UBA3-206ENST00000464605 ARHGEF28Q8N1W1 1705 aaKnown RBP32.1■■■□□ 2.73
UBA3-206ENST00000464605 SAFB2Q14151 953 aaKnown RBP eCLIP32.08■■■□□ 2.73
UBA3-206ENST00000464605 NEUROD1Q13562 356 aa32.07■■■□□ 2.72
UBA3-206ENST00000464605 NUTM2FA1L443 756 aa32.06■■■□□ 2.72
UBA3-206ENST00000464605 POGKQ9P215 609 aa32.06■■■□□ 2.72
UBA3-206ENST00000464605 ADGRB2O60241 1585 aa32.06■■■□□ 2.72
UBA3-206ENST00000464605 NBPF1Q3BBV0 1214 aa32.05■■■□□ 2.72
UBA3-206ENST00000464605 ESCO1Q5FWF5 840 aa32.04■■■□□ 2.72
UBA3-206ENST00000464605 MEX3CQ5U5Q3 659 aaKnown RBP32.04■■■□□ 2.72
UBA3-206ENST00000464605 SOS2Q07890 1332 aaPredicted RBP32.03■■■□□ 2.72
UBA3-206ENST00000464605 LRRC59Q96AG4 307 aaKnown RBP32.03■■■□□ 2.72
UBA3-206ENST00000464605 USP32Q8NFA0 1604 aa32■■■□□ 2.71
UBA3-206ENST00000464605 NUTM2BA6NNL0 878 aaPredicted RBP31.98■■■□□ 2.71
UBA3-206ENST00000464605 NUTM2EB1AL46 878 aaPredicted RBP31.98■■■□□ 2.71
UBA3-206ENST00000464605 ZNF772Q68DY9 489 aaPredicted RBP31.98■■■□□ 2.71
UBA3-206ENST00000464605 NUTM2AQ8IVF1 878 aaPredicted RBP31.98■■■□□ 2.71
UBA3-206ENST00000464605 PXDNQ92626 1479 aa31.97■■■□□ 2.71
UBA3-206ENST00000464605 TRPM1Q7Z4N2 1603 aa31.97■■■□□ 2.71
UBA3-206ENST00000464605 PNPLA6Q8IY17 1366 aa31.96■■■□□ 2.71
UBA3-206ENST00000464605 KIF1AQ12756 1690 aa31.96■■■□□ 2.71
UBA3-206ENST00000464605 HIRIP3Q9BW71 556 aaPredicted RBP31.96■■■□□ 2.71
UBA3-206ENST00000464605 MINK1Q8N4C8 1332 aaPredicted RBP31.96■■■□□ 2.71
UBA3-206ENST00000464605 FOXO3O43524 673 aa31.95■■■□□ 2.71
UBA3-206ENST00000464605 NPHP3Q7Z494 1330 aa31.94■■■□□ 2.7
UBA3-206ENST00000464605 ANKARQ7Z5J8 1434 aa31.91■■■□□ 2.7
UBA3-206ENST00000464605 WASLO00401 505 aaPredicted RBP31.89■■■□□ 2.7
UBA3-206ENST00000464605 XPCQ01831 940 aaPredicted RBP31.88■■■□□ 2.69
UBA3-206ENST00000464605 PHF8Q9UPP1 1060 aa31.88■■■□□ 2.69
UBA3-206ENST00000464605 PRR36Q9H6K5 1346 aa31.88■■■□□ 2.69
UBA3-206ENST00000464605 COL22A1Q8NFW1 1626 aaPredicted RBP31.88■■■□□ 2.69
UBA3-206ENST00000464605 NBPF8Q3BBV2 869 aa31.87■■■□□ 2.69
UBA3-206ENST00000464605 TULP4Q9NRJ4 1543 aa31.86■■■□□ 2.69
UBA3-206ENST00000464605 AFF2P51816 1311 aa31.85■■■□□ 2.69
UBA3-206ENST00000464605 EIF3AQ14152 1382 aaKnown RBP31.81■■■□□ 2.68
UBA3-206ENST00000464605 RXRBP28702 533 aa31.8■■■□□ 2.68
UBA3-206ENST00000464605 KRT28Q7Z3Y7 464 aa31.8■■■□□ 2.68
UBA3-206ENST00000464605 C8orf37Q96NL8 207 aa31.8■■■□□ 2.68
UBA3-206ENST00000464605 QRICH2Q9H0J4 1663 aa31.8■■■□□ 2.68
UBA3-206ENST00000464605 PMFBP1Q8TBY8 1022 aa31.79■■■□□ 2.68
UBA3-206ENST00000464605 PCGF6Q9BYE7 350 aa31.78■■■□□ 2.68
UBA3-206ENST00000464605 TONSLQ96HA7 1378 aa31.78■■■□□ 2.68
UBA3-206ENST00000464605 ATP7BP35670 1465 aa31.78■■■□□ 2.68
UBA3-206ENST00000464605 ITSN1Q15811 1721 aa31.78■■■□□ 2.68
UBA3-206ENST00000464605 SPATA31A3Q5VYP0 1347 aa31.77■■■□□ 2.68
UBA3-206ENST00000464605 CDK19Q9BWU1 502 aa31.77■■■□□ 2.68
UBA3-206ENST00000464605 CENPJQ9HC77 1338 aaPredicted RBP31.76■■■□□ 2.68
UBA3-206ENST00000464605 ROCK2O75116 1388 aaKnown RBP31.76■■■□□ 2.67
UBA3-206ENST00000464605 GPRASP1Q5JY77 1395 aa31.75■■■□□ 2.67
UBA3-206ENST00000464605 CDK12Q9NYV4 1490 aaPredicted RBP31.75■■■□□ 2.67
UBA3-206ENST00000464605 TRPM3Q9HCF6 1732 aaPredicted RBP31.75■■■□□ 2.67
UBA3-206ENST00000464605 ADAMTS2O95450 1211 aa31.74■■■□□ 2.67
UBA3-206ENST00000464605 NUDT16Q96DE0 195 aaKnown RBP31.74■■■□□ 2.67
UBA3-206ENST00000464605 TOPAZ1Q8N9V7 1692 aa31.73■■■□□ 2.67
UBA3-206ENST00000464605 MARF1Q9Y4F3 1742 aaKnown RBP31.72■■■□□ 2.67
UBA3-206ENST00000464605 SBNO1A3KN83 1393 aa31.71■■■□□ 2.67
UBA3-206ENST00000464605 PSME1Q06323 249 aa31.71■■■□□ 2.67
UBA3-206ENST00000464605 TNS3Q68CZ2 1445 aa31.7■■■□□ 2.67
UBA3-206ENST00000464605 NGLY1Q96IV0 654 aa31.7■■■□□ 2.67
UBA3-206ENST00000464605 QTRT2Q9H974 415 aaKnown RBP31.7■■■□□ 2.67
UBA3-206ENST00000464605 RALGAPBQ86X10 1494 aa31.67■■■□□ 2.66
UBA3-206ENST00000464605 ALS2Q96Q42 1657 aa31.67■■■□□ 2.66
UBA3-206ENST00000464605 RBM6P78332 1123 aaKnown RBP31.66■■■□□ 2.66
UBA3-206ENST00000464605 UPF1Q92900 1129 aaKnown RBP eCLIP31.65■■■□□ 2.66
UBA3-206ENST00000464605 FNBP4Q8N3X1 1017 aaPredicted RBP31.64■■■□□ 2.66
UBA3-206ENST00000464605 CCDC61Q9Y6R9 512 aa31.64■■■□□ 2.66
UBA3-206ENST00000464605 ABCA3Q99758 1704 aa31.63■■■□□ 2.65
UBA3-206ENST00000464605 NGDNQ8NEJ9 315 aaKnown RBP31.62■■■□□ 2.65
UBA3-206ENST00000464605 RGS12O14924 1447 aa31.61■■■□□ 2.65
UBA3-206ENST00000464605 PLEKHG3A1L390 1219 aa31.61■■■□□ 2.65
UBA3-206ENST00000464605 CABP2Q9NPB3 220 aa31.61■■■□□ 2.65
UBA3-206ENST00000464605 USP21Q9UK80 565 aa31.61■■■□□ 2.65
UBA3-206ENST00000464605 POLR3AO14802 1390 aaPredicted RBP31.6■■■□□ 2.65
UBA3-206ENST00000464605 CARD11Q9BXL7 1154 aa31.59■■■□□ 2.65
UBA3-206ENST00000464605 ARHGEF10O15013 1369 aa31.58■■■□□ 2.65
UBA3-206ENST00000464605 SRPK2P78362 688 aaKnown RBP31.58■■■□□ 2.65
UBA3-206ENST00000464605 CLSPNQ9HAW4 1339 aa31.57■■■□□ 2.64
UBA3-206ENST00000464605 CABLES1Q8TDN4 633 aa31.57■■■□□ 2.64
UBA3-206ENST00000464605 ACEP12821 1306 aa31.56■■■□□ 2.64
UBA3-206ENST00000464605 TRPC5Q9UL62 973 aaPredicted RBP31.56■■■□□ 2.64
UBA3-206ENST00000464605 LMOD2Q6P5Q4 547 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms