RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SUPT20H-204ENST00000464572 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
SUPT20H-204ENST00000464572 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
SUPT20H-204ENST00000464572 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
SUPT20H-204ENST00000464572 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
SUPT20H-204ENST00000464572 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
SUPT20H-204ENST00000464572 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
SUPT20H-204ENST00000464572 CCDC7Q96M83 1385 aa17.78■□□□□ 0.44
SUPT20H-204ENST00000464572 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
SUPT20H-204ENST00000464572 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.43
SUPT20H-204ENST00000464572 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.76■□□□□ 0.43
SUPT20H-204ENST00000464572 CDCA8Q53HL2 280 aa17.75■□□□□ 0.43
SUPT20H-204ENST00000464572 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
SUPT20H-204ENST00000464572 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
SUPT20H-204ENST00000464572 SRPK2P78362 688 aaKnown RBP17.74■□□□□ 0.43
SUPT20H-204ENST00000464572 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
SUPT20H-204ENST00000464572 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
SUPT20H-204ENST00000464572 CABP2Q9NPB3 220 aa17.73■□□□□ 0.43
SUPT20H-204ENST00000464572 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
SUPT20H-204ENST00000464572 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
SUPT20H-204ENST00000464572 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
SUPT20H-204ENST00000464572 ADGRL3Q9HAR2 1447 aa17.69■□□□□ 0.42
SUPT20H-204ENST00000464572 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
SUPT20H-204ENST00000464572 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
SUPT20H-204ENST00000464572 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
SUPT20H-204ENST00000464572 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
SUPT20H-204ENST00000464572 C19orf44Q9H6X5 657 aa17.67■□□□□ 0.42
SUPT20H-204ENST00000464572 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
SUPT20H-204ENST00000464572 TMC1Q8TDI8 760 aa17.66■□□□□ 0.42
SUPT20H-204ENST00000464572 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
SUPT20H-204ENST00000464572 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
SUPT20H-204ENST00000464572 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
SUPT20H-204ENST00000464572 PRR36Q9H6K5 1346 aa17.64■□□□□ 0.41
SUPT20H-204ENST00000464572 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
SUPT20H-204ENST00000464572 XIRP1Q702N8 1843 aaKnown RBP17.64■□□□□ 0.41
SUPT20H-204ENST00000464572 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
SUPT20H-204ENST00000464572 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
SUPT20H-204ENST00000464572 MSH6P52701 1360 aa17.62■□□□□ 0.41
SUPT20H-204ENST00000464572 CABP1Q9NZU7 370 aa17.62■□□□□ 0.41
SUPT20H-204ENST00000464572 ATP7BP35670 1465 aa17.62■□□□□ 0.41
SUPT20H-204ENST00000464572 MYOM1P52179 1685 aa17.62■□□□□ 0.41
SUPT20H-204ENST00000464572 ATF3P18847 181 aa17.61■□□□□ 0.41
SUPT20H-204ENST00000464572 PANK3Q9H999 370 aa17.61■□□□□ 0.41
SUPT20H-204ENST00000464572 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
SUPT20H-204ENST00000464572 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
SUPT20H-204ENST00000464572 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
SUPT20H-204ENST00000464572 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
SUPT20H-204ENST00000464572 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
SUPT20H-204ENST00000464572 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
SUPT20H-204ENST00000464572 DCCP43146 1447 aa17.59■□□□□ 0.41
SUPT20H-204ENST00000464572 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
SUPT20H-204ENST00000464572 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
SUPT20H-204ENST00000464572 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
SUPT20H-204ENST00000464572 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
SUPT20H-204ENST00000464572 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
SUPT20H-204ENST00000464572 ANKRD36BQ8N2N9 1353 aa17.55■□□□□ 0.4
SUPT20H-204ENST00000464572 TOPAZ1Q8N9V7 1692 aa17.55■□□□□ 0.4
SUPT20H-204ENST00000464572 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 MST1RQ04912 1400 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 ORAI2Q96SN7 254 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 PER1O15534 1290 aaPredicted RBP17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
SUPT20H-204ENST00000464572 ACEP12821 1306 aa17.53■□□□□ 0.4
SUPT20H-204ENST00000464572 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
SUPT20H-204ENST00000464572 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
SUPT20H-204ENST00000464572 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.4
SUPT20H-204ENST00000464572 SLAIN2Q9P270 581 aa17.51■□□□□ 0.39
SUPT20H-204ENST00000464572 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
SUPT20H-204ENST00000464572 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
SUPT20H-204ENST00000464572 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
SUPT20H-204ENST00000464572 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
SUPT20H-204ENST00000464572 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
SUPT20H-204ENST00000464572 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
SUPT20H-204ENST00000464572 FOXO3O43524 673 aa17.47■□□□□ 0.39
SUPT20H-204ENST00000464572 AKAP12Q02952 1782 aa17.46■□□□□ 0.39
SUPT20H-204ENST00000464572 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
SUPT20H-204ENST00000464572 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
SUPT20H-204ENST00000464572 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
SUPT20H-204ENST00000464572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■■□□□ 12.2
SUPT20H-204ENST00000464572 USP6P35125 1406 aa17.45■□□□□ 0.38
SUPT20H-204ENST00000464572 PSME1Q06323 249 aa17.45■□□□□ 0.38
SUPT20H-204ENST00000464572 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
SUPT20H-204ENST00000464572 ANP32CO43423 234 aa17.44■□□□□ 0.38
SUPT20H-204ENST00000464572 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
SUPT20H-204ENST00000464572 CGNL1Q0VF96 1302 aa17.44■□□□□ 0.38
SUPT20H-204ENST00000464572 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
SUPT20H-204ENST00000464572 KIF1AQ12756 1690 aa17.43■□□□□ 0.38
SUPT20H-204ENST00000464572 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
SUPT20H-204ENST00000464572 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
SUPT20H-204ENST00000464572 TOM1O60784 492 aa17.42■□□□□ 0.38
SUPT20H-204ENST00000464572 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
SUPT20H-204ENST00000464572 FYB1O15117 783 aa17.41■□□□□ 0.38
SUPT20H-204ENST00000464572 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
SUPT20H-204ENST00000464572 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
SUPT20H-204ENST00000464572 MIER1Q8N108 512 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms