RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 DDX17Q92841 729 aaKnown RBP29.38■■■□□ 2.29
SHISA4-202ENST00000464117 ORAI2Q96SN7 254 aa29.37■■■□□ 2.29
SHISA4-202ENST00000464117 C14orf93Q9H972 538 aaKnown RBP29.37■■■□□ 2.29
SHISA4-202ENST00000464117 ZNF772Q68DY9 489 aaPredicted RBP29.36■■■□□ 2.29
SHISA4-202ENST00000464117 YTHDC2Q9H6S0 1430 aaKnown RBP29.36■■■□□ 2.29
SHISA4-202ENST00000464117 NUTM2BA6NNL0 878 aaPredicted RBP29.34■■■□□ 2.29
SHISA4-202ENST00000464117 NUTM2EB1AL46 878 aaPredicted RBP29.34■■■□□ 2.29
SHISA4-202ENST00000464117 WAPLQ7Z5K2 1190 aa29.34■■■□□ 2.29
SHISA4-202ENST00000464117 NUTM2AQ8IVF1 878 aaPredicted RBP29.34■■■□□ 2.29
SHISA4-202ENST00000464117 PNPLA6Q8IY17 1366 aa29.34■■■□□ 2.29
SHISA4-202ENST00000464117 SIRT1Q96EB6 747 aa29.33■■■□□ 2.29
SHISA4-202ENST00000464117 SOS2Q07890 1332 aaPredicted RBP29.33■■■□□ 2.29
SHISA4-202ENST00000464117 DHX57Q6P158 1386 aaKnown RBP29.29■■■□□ 2.28
SHISA4-202ENST00000464117 PLEKHH1Q9ULM0 1364 aa29.29■■■□□ 2.28
SHISA4-202ENST00000464117 CFAP70Q5T0N1 1121 aa29.29■■■□□ 2.28
SHISA4-202ENST00000464117 ESCO1Q5FWF5 840 aa29.28■■■□□ 2.28
SHISA4-202ENST00000464117 NPHP3Q7Z494 1330 aa29.26■■■□□ 2.27
SHISA4-202ENST00000464117 STAC3Q96MF2 364 aa29.23■■■□□ 2.27
SHISA4-202ENST00000464117 AFF2P51816 1311 aa29.22■■■□□ 2.27
SHISA4-202ENST00000464117 FMN2Q9NZ56 1722 aa29.21■■■□□ 2.27
SHISA4-202ENST00000464117 NUTM2FA1L443 756 aa29.19■■■□□ 2.26
SHISA4-202ENST00000464117 C8orf37Q96NL8 207 aa29.19■■■□□ 2.26
SHISA4-202ENST00000464117 DLC1Q96QB1 1528 aa29.19■■■□□ 2.26
SHISA4-202ENST00000464117 PXDNQ92626 1479 aa29.18■■■□□ 2.26
SHISA4-202ENST00000464117 DCAF11Q8TEB1 546 aa29.18■■■□□ 2.26
SHISA4-202ENST00000464117 FOXO3O43524 673 aa29.17■■■□□ 2.26
SHISA4-202ENST00000464117 RXRBP28702 533 aa29.17■■■□□ 2.26
SHISA4-202ENST00000464117 ADGRB1O14514 1584 aa29.17■■■□□ 2.26
SHISA4-202ENST00000464117 COL22A1Q8NFW1 1626 aaPredicted RBP29.16■■■□□ 2.26
SHISA4-202ENST00000464117 PRAM1Q96QH2 718 aa29.16■■■□□ 2.26
SHISA4-202ENST00000464117 KDM2AQ9Y2K7 1162 aa29.15■■■□□ 2.26
SHISA4-202ENST00000464117 ADAMTS2O95450 1211 aa29.14■■■□□ 2.26
SHISA4-202ENST00000464117 KIF1AQ12756 1690 aa29.14■■■□□ 2.26
SHISA4-202ENST00000464117 POGKQ9P215 609 aa29.13■■■□□ 2.25
SHISA4-202ENST00000464117 CDK12Q9NYV4 1490 aaPredicted RBP29.12■■■□□ 2.25
SHISA4-202ENST00000464117 NGLY1Q96IV0 654 aa29.12■■■□□ 2.25
SHISA4-202ENST00000464117 XPCQ01831 940 aaPredicted RBP29.1■■■□□ 2.25
SHISA4-202ENST00000464117 SAFB2Q14151 953 aaKnown RBP eCLIP29.1■■■□□ 2.25
SHISA4-202ENST00000464117 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
SHISA4-202ENST00000464117 TRAK1Q9UPV9 953 aa29.08■■■□□ 2.25
SHISA4-202ENST00000464117 ADGRB2O60241 1585 aa29.07■■■□□ 2.24
SHISA4-202ENST00000464117 PHF8Q9UPP1 1060 aa29.06■■■□□ 2.24
SHISA4-202ENST00000464117 RBM6P78332 1123 aaKnown RBP29.05■■■□□ 2.24
SHISA4-202ENST00000464117 ANKARQ7Z5J8 1434 aa29.04■■■□□ 2.24
SHISA4-202ENST00000464117 SPATA31A3Q5VYP0 1347 aa29.04■■■□□ 2.24
SHISA4-202ENST00000464117 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
SHISA4-202ENST00000464117 RGPD8O14715 1765 aaPredicted RBP29.03■■■□□ 2.24
SHISA4-202ENST00000464117 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
SHISA4-202ENST00000464117 USP21Q9UK80 565 aa29.02■■■□□ 2.24
SHISA4-202ENST00000464117 PSME1Q06323 249 aa29.01■■■□□ 2.23
SHISA4-202ENST00000464117 EIF3AQ14152 1382 aaKnown RBP29.01■■■□□ 2.23
SHISA4-202ENST00000464117 TRPC5Q9UL62 973 aaPredicted RBP28.98■■■□□ 2.23
SHISA4-202ENST00000464117 USP32Q8NFA0 1604 aa28.98■■■□□ 2.23
SHISA4-202ENST00000464117 MARF1Q9Y4F3 1742 aaKnown RBP28.97■■■□□ 2.23
SHISA4-202ENST00000464117 TNS3Q68CZ2 1445 aa28.97■■■□□ 2.23
SHISA4-202ENST00000464117 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
SHISA4-202ENST00000464117 MINK1Q8N4C8 1332 aaPredicted RBP28.96■■■□□ 2.23
SHISA4-202ENST00000464117 RGS12O14924 1447 aa28.96■■■□□ 2.23
SHISA4-202ENST00000464117 SBNO1A3KN83 1393 aa28.96■■■□□ 2.23
SHISA4-202ENST00000464117 UPF1Q92900 1129 aaKnown RBP eCLIP28.95■■■□□ 2.22
SHISA4-202ENST00000464117 WASLO00401 505 aaPredicted RBP28.94■■■□□ 2.22
SHISA4-202ENST00000464117 ATRNO75882 1429 aa28.94■■■□□ 2.22
SHISA4-202ENST00000464117 KIAA1210Q9ULL0 1709 aa28.93■■■□□ 2.22
SHISA4-202ENST00000464117 TULP4Q9NRJ4 1543 aa28.93■■■□□ 2.22
SHISA4-202ENST00000464117 ARHGEF28Q8N1W1 1705 aaKnown RBP28.92■■■□□ 2.22
SHISA4-202ENST00000464117 PMFBP1Q8TBY8 1022 aa28.92■■■□□ 2.22
SHISA4-202ENST00000464117 BCL9LQ86UU0 1499 aa28.91■■■□□ 2.22
SHISA4-202ENST00000464117 ARHGEF10O15013 1369 aa28.91■■■□□ 2.22
SHISA4-202ENST00000464117 PRR36Q9H6K5 1346 aa28.89■■■□□ 2.21
SHISA4-202ENST00000464117 HAP1P54257 671 aaPredicted RBP28.86■■■□□ 2.21
SHISA4-202ENST00000464117 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
SHISA4-202ENST00000464117 SLIT2O94813 1529 aa28.85■■■□□ 2.21
SHISA4-202ENST00000464117 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
SHISA4-202ENST00000464117 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.84■■■□□ 2.21
SHISA4-202ENST00000464117 UNC5CLQ8IV45 518 aa28.83■■■□□ 2.21
SHISA4-202ENST00000464117 TRPM3Q9HCF6 1732 aaPredicted RBP28.82■■■□□ 2.2
SHISA4-202ENST00000464117 CABLES1Q8TDN4 633 aa28.81■■■□□ 2.2
SHISA4-202ENST00000464117 ATP7BP35670 1465 aa28.8■■■□□ 2.2
SHISA4-202ENST00000464117 NBPF1Q3BBV0 1214 aa28.8■■■□□ 2.2
SHISA4-202ENST00000464117 NGDNQ8NEJ9 315 aaKnown RBP28.8■■■□□ 2.2
SHISA4-202ENST00000464117 GJD4Q96KN9 370 aaPredicted RBP28.8■■■□□ 2.2
SHISA4-202ENST00000464117 ITSN1Q15811 1721 aa28.8■■■□□ 2.2
SHISA4-202ENST00000464117 NUDT16Q96DE0 195 aaKnown RBP28.79■■■□□ 2.2
SHISA4-202ENST00000464117 ABCA3Q99758 1704 aa28.79■■■□□ 2.2
SHISA4-202ENST00000464117 ATAD2Q6PL18 1390 aa28.77■■■□□ 2.2
SHISA4-202ENST00000464117 CDK19Q9BWU1 502 aa28.77■■■□□ 2.2
SHISA4-202ENST00000464117 ALS2Q96Q42 1657 aa28.77■■■□□ 2.2
SHISA4-202ENST00000464117 L3MBTL2Q969R5 705 aa28.76■■■□□ 2.19
SHISA4-202ENST00000464117 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
SHISA4-202ENST00000464117 RALGAPBQ86X10 1494 aa28.73■■■□□ 2.19
SHISA4-202ENST00000464117 NWD2Q9ULI1 1742 aa28.73■■■□□ 2.19
SHISA4-202ENST00000464117 SIN3AQ96ST3 1273 aa28.72■■■□□ 2.19
SHISA4-202ENST00000464117 CENPJQ9HC77 1338 aaPredicted RBP28.71■■■□□ 2.19
SHISA4-202ENST00000464117 PLCH1Q4KWH8 1693 aa28.71■■■□□ 2.19
SHISA4-202ENST00000464117 CCDC61Q9Y6R9 512 aa28.71■■■□□ 2.19
SHISA4-202ENST00000464117 PAK3O75914 559 aaPredicted RBP28.7■■■□□ 2.18
SHISA4-202ENST00000464117 VPS72Q15906 364 aa28.7■■■□□ 2.18
SHISA4-202ENST00000464117 GLI3P10071 1580 aa28.7■■■□□ 2.18
SHISA4-202ENST00000464117 TOPAZ1Q8N9V7 1692 aa28.69■■■□□ 2.18
SHISA4-202ENST00000464117 EP400Q96L91 3159 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms