RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
HMGN1-210ENST00000464078 IFT172Q9UG01 1749 aa26.07■■□□□ 1.76
HMGN1-210ENST00000464078 PXDNQ92626 1479 aa26.06■■□□□ 1.76
HMGN1-210ENST00000464078 FNBP4Q8N3X1 1017 aaPredicted RBP26.04■■□□□ 1.76
HMGN1-210ENST00000464078 KNDC1Q76NI1 1749 aa26.04■■□□□ 1.76
HMGN1-210ENST00000464078 SPATA31E1Q6ZUB1 1445 aa26.04■■□□□ 1.76
HMGN1-210ENST00000464078 MARF1Q9Y4F3 1742 aaKnown RBP26.03■■□□□ 1.76
HMGN1-210ENST00000464078 NPHP3Q7Z494 1330 aa26.03■■□□□ 1.76
HMGN1-210ENST00000464078 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
HMGN1-210ENST00000464078 ATRNO75882 1429 aa26.02■■□□□ 1.76
HMGN1-210ENST00000464078 ATAD2Q6PL18 1390 aa26.01■■□□□ 1.75
HMGN1-210ENST00000464078 USP21Q9UK80 565 aa26.01■■□□□ 1.75
HMGN1-210ENST00000464078 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
HMGN1-210ENST00000464078 TRPC5Q9UL62 973 aaPredicted RBP26■■□□□ 1.75
HMGN1-210ENST00000464078 LRPPRCP42704 1394 aaKnown RBP25.98■■□□□ 1.75
HMGN1-210ENST00000464078 ADGRF5Q8IZF2 1346 aa25.97■■□□□ 1.75
HMGN1-210ENST00000464078 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
HMGN1-210ENST00000464078 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
HMGN1-210ENST00000464078 ABCC11Q96J66 1382 aa25.96■■□□□ 1.75
HMGN1-210ENST00000464078 ESCO1Q5FWF5 840 aa25.96■■□□□ 1.75
HMGN1-210ENST00000464078 EP400Q96L91 3159 aa25.95■■□□□ 1.75
HMGN1-210ENST00000464078 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.95■■□□□ 1.74
HMGN1-210ENST00000464078 BCL9LQ86UU0 1499 aa25.95■■□□□ 1.74
HMGN1-210ENST00000464078 KIF1AQ12756 1690 aa25.95■■□□□ 1.74
HMGN1-210ENST00000464078 FOXD1Q16676 465 aa25.94■■□□□ 1.74
HMGN1-210ENST00000464078 SRCAPQ6ZRS2 3230 aa25.92■■□□□ 1.74
HMGN1-210ENST00000464078 FOXO3O43524 673 aa25.91■■□□□ 1.74
HMGN1-210ENST00000464078 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
HMGN1-210ENST00000464078 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
HMGN1-210ENST00000464078 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
HMGN1-210ENST00000464078 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
HMGN1-210ENST00000464078 STK26Q9P289 416 aa25.87■■□□□ 1.73
HMGN1-210ENST00000464078 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
HMGN1-210ENST00000464078 XPCQ01831 940 aaPredicted RBP25.86■■□□□ 1.73
HMGN1-210ENST00000464078 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
HMGN1-210ENST00000464078 USP32Q8NFA0 1604 aa25.85■■□□□ 1.73
HMGN1-210ENST00000464078 SLIT2O94813 1529 aa25.85■■□□□ 1.73
HMGN1-210ENST00000464078 SPATA31A3Q5VYP0 1347 aa25.84■■□□□ 1.73
HMGN1-210ENST00000464078 TMEM132EQ6IEE7 984 aa25.83■■□□□ 1.73
HMGN1-210ENST00000464078 SIRT1Q96EB6 747 aa25.83■■□□□ 1.73
HMGN1-210ENST00000464078 GJD4Q96KN9 370 aaPredicted RBP25.82■■□□□ 1.72
HMGN1-210ENST00000464078 GLI3P10071 1580 aa25.82■■□□□ 1.72
HMGN1-210ENST00000464078 NUTM2FA1L443 756 aa25.81■■□□□ 1.72
HMGN1-210ENST00000464078 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
HMGN1-210ENST00000464078 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
HMGN1-210ENST00000464078 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
HMGN1-210ENST00000464078 TNS3Q68CZ2 1445 aa25.79■■□□□ 1.72
HMGN1-210ENST00000464078 RGPD8O14715 1765 aaPredicted RBP25.78■■□□□ 1.72
HMGN1-210ENST00000464078 C14orf93Q9H972 538 aaKnown RBP25.78■■□□□ 1.72
HMGN1-210ENST00000464078 ABCA3Q99758 1704 aa25.77■■□□□ 1.72
HMGN1-210ENST00000464078 UNC5CLQ8IV45 518 aa25.77■■□□□ 1.72
HMGN1-210ENST00000464078 NWD2Q9ULI1 1742 aa25.76■■□□□ 1.71
HMGN1-210ENST00000464078 DLC1Q96QB1 1528 aa25.75■■□□□ 1.71
HMGN1-210ENST00000464078 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
HMGN1-210ENST00000464078 ADGRB2O60241 1585 aa25.74■■□□□ 1.71
HMGN1-210ENST00000464078 KRT28Q7Z3Y7 464 aa25.74■■□□□ 1.71
HMGN1-210ENST00000464078 SBNO1A3KN83 1393 aa25.73■■□□□ 1.71
HMGN1-210ENST00000464078 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
HMGN1-210ENST00000464078 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
HMGN1-210ENST00000464078 PHF8Q9UPP1 1060 aa25.72■■□□□ 1.71
HMGN1-210ENST00000464078 BRWD3Q6RI45 1802 aa25.71■■□□□ 1.71
HMGN1-210ENST00000464078 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
HMGN1-210ENST00000464078 ANKARQ7Z5J8 1434 aa25.71■■□□□ 1.71
HMGN1-210ENST00000464078 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
HMGN1-210ENST00000464078 PSME1Q06323 249 aa25.69■■□□□ 1.7
HMGN1-210ENST00000464078 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
HMGN1-210ENST00000464078 CFAP70Q5T0N1 1121 aa25.68■■□□□ 1.7
HMGN1-210ENST00000464078 VPS72Q15906 364 aa25.66■■□□□ 1.7
HMGN1-210ENST00000464078 PRAM1Q96QH2 718 aa25.66■■□□□ 1.7
HMGN1-210ENST00000464078 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
HMGN1-210ENST00000464078 HAP1P54257 671 aaPredicted RBP25.63■■□□□ 1.69
HMGN1-210ENST00000464078 NRAPQ86VF7 1730 aa25.63■■□□□ 1.69
HMGN1-210ENST00000464078 ALS2Q96Q42 1657 aa25.62■■□□□ 1.69
HMGN1-210ENST00000464078 ONECUT3O60422 494 aaPredicted RBP25.62■■□□□ 1.69
HMGN1-210ENST00000464078 CABLES1Q8TDN4 633 aa25.62■■□□□ 1.69
HMGN1-210ENST00000464078 SEPT12Q8IYM1 358 aa25.6■■□□□ 1.69
HMGN1-210ENST00000464078 EIF3AQ14152 1382 aaKnown RBP25.59■■□□□ 1.69
HMGN1-210ENST00000464078 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
HMGN1-210ENST00000464078 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
HMGN1-210ENST00000464078 POGKQ9P215 609 aa25.57■■□□□ 1.68
HMGN1-210ENST00000464078 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
HMGN1-210ENST00000464078 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
HMGN1-210ENST00000464078 COL14A1Q05707 1796 aaKnown RBP25.56■■□□□ 1.68
HMGN1-210ENST00000464078 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
HMGN1-210ENST00000464078 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
HMGN1-210ENST00000464078 KRT27Q7Z3Y8 459 aa25.53■■□□□ 1.68
HMGN1-210ENST00000464078 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
HMGN1-210ENST00000464078 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
HMGN1-210ENST00000464078 LRP5O75197 1615 aa25.52■■□□□ 1.68
HMGN1-210ENST00000464078 SF3B2Q13435 895 aaKnown RBP25.51■■□□□ 1.67
HMGN1-210ENST00000464078 DEFB132Q7Z7B7 95 aa25.51■■□□□ 1.67
HMGN1-210ENST00000464078 CCDC9Q9Y3X0 531 aaKnown RBP25.51■■□□□ 1.67
HMGN1-210ENST00000464078 PRR36Q9H6K5 1346 aa25.51■■□□□ 1.67
HMGN1-210ENST00000464078 ITSN1Q15811 1721 aa25.5■■□□□ 1.67
HMGN1-210ENST00000464078 ARHGEF28Q8N1W1 1705 aaKnown RBP25.49■■□□□ 1.67
HMGN1-210ENST00000464078 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
HMGN1-210ENST00000464078 STAC3Q96MF2 364 aa25.48■■□□□ 1.67
HMGN1-210ENST00000464078 HIRIP3Q9BW71 556 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-210ENST00000464078 TRAK1Q9UPV9 953 aa25.48■■□□□ 1.67
HMGN1-210ENST00000464078 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms