RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
XRN1-203ENST00000463916 ORAI2Q96SN7 254 aa18.88■□□□□ 0.61
XRN1-203ENST00000463916 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
XRN1-203ENST00000463916 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
XRN1-203ENST00000463916 JCADQ9P266 1359 aa18.85■□□□□ 0.61
XRN1-203ENST00000463916 SAFB2Q14151 953 aaKnown RBP eCLIP18.85■□□□□ 0.61
XRN1-203ENST00000463916 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
XRN1-203ENST00000463916 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
XRN1-203ENST00000463916 TRAK1Q9UPV9 953 aa18.84■□□□□ 0.61
XRN1-203ENST00000463916 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.61
XRN1-203ENST00000463916 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
XRN1-203ENST00000463916 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
XRN1-203ENST00000463916 RGS17Q9UGC6 210 aaPredicted RBP18.81■□□□□ 0.6
XRN1-203ENST00000463916 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
XRN1-203ENST00000463916 DLC1Q96QB1 1528 aa18.8■□□□□ 0.6
XRN1-203ENST00000463916 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
XRN1-203ENST00000463916 POGKQ9P215 609 aa18.8■□□□□ 0.6
XRN1-203ENST00000463916 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
XRN1-203ENST00000463916 LRP6O75581 1613 aa18.77■□□□□ 0.6
XRN1-203ENST00000463916 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.59
XRN1-203ENST00000463916 LRRC59Q96AG4 307 aaKnown RBP18.77■□□□□ 0.59
XRN1-203ENST00000463916 SHPRHQ149N8 1683 aa18.77■□□□□ 0.59
XRN1-203ENST00000463916 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
XRN1-203ENST00000463916 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
XRN1-203ENST00000463916 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
XRN1-203ENST00000463916 FOXO3O43524 673 aa18.75■□□□□ 0.59
XRN1-203ENST00000463916 MINK1Q8N4C8 1332 aaPredicted RBP18.74■□□□□ 0.59
XRN1-203ENST00000463916 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
XRN1-203ENST00000463916 KIAA1210Q9ULL0 1709 aa18.73■□□□□ 0.59
XRN1-203ENST00000463916 RGPD8O14715 1765 aaPredicted RBP18.73■□□□□ 0.59
XRN1-203ENST00000463916 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
XRN1-203ENST00000463916 NUTM2BA6NNL0 878 aaPredicted RBP18.72■□□□□ 0.59
XRN1-203ENST00000463916 NUTM2EB1AL46 878 aaPredicted RBP18.72■□□□□ 0.59
XRN1-203ENST00000463916 NUTM2AQ8IVF1 878 aaPredicted RBP18.72■□□□□ 0.59
XRN1-203ENST00000463916 ARHGEF28Q8N1W1 1705 aaKnown RBP18.72■□□□□ 0.59
XRN1-203ENST00000463916 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
XRN1-203ENST00000463916 ADGRB2O60241 1585 aa18.7■□□□□ 0.58
XRN1-203ENST00000463916 PXDNQ92626 1479 aa18.7■□□□□ 0.58
XRN1-203ENST00000463916 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
XRN1-203ENST00000463916 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
XRN1-203ENST00000463916 WASLO00401 505 aaPredicted RBP18.68■□□□□ 0.58
XRN1-203ENST00000463916 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
XRN1-203ENST00000463916 PRR36Q9H6K5 1346 aa18.67■□□□□ 0.58
XRN1-203ENST00000463916 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
XRN1-203ENST00000463916 SOCS7O14512 581 aa18.66■□□□□ 0.58
XRN1-203ENST00000463916 NBPF8Q3BBV2 869 aa18.66■□□□□ 0.58
XRN1-203ENST00000463916 PMFBP1Q8TBY8 1022 aa18.65■□□□□ 0.58
XRN1-203ENST00000463916 ANKARQ7Z5J8 1434 aa18.65■□□□□ 0.58
XRN1-203ENST00000463916 KIF1AQ12756 1690 aa18.64■□□□□ 0.58
XRN1-203ENST00000463916 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
XRN1-203ENST00000463916 TRPM1Q7Z4N2 1603 aa18.64■□□□□ 0.57
XRN1-203ENST00000463916 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
XRN1-203ENST00000463916 TULP4Q9NRJ4 1543 aa18.62■□□□□ 0.57
XRN1-203ENST00000463916 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
XRN1-203ENST00000463916 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
XRN1-203ENST00000463916 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
XRN1-203ENST00000463916 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
XRN1-203ENST00000463916 COL22A1Q8NFW1 1626 aaPredicted RBP18.6■□□□□ 0.57
XRN1-203ENST00000463916 CENPJQ9HC77 1338 aaPredicted RBP18.6■□□□□ 0.57
XRN1-203ENST00000463916 PSME1Q06323 249 aa18.59■□□□□ 0.57
XRN1-203ENST00000463916 NUDT16Q96DE0 195 aaKnown RBP18.59■□□□□ 0.57
XRN1-203ENST00000463916 ROCK2O75116 1388 aaKnown RBP18.59■□□□□ 0.57
XRN1-203ENST00000463916 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
XRN1-203ENST00000463916 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
XRN1-203ENST00000463916 ATP7BP35670 1465 aa18.58■□□□□ 0.57
XRN1-203ENST00000463916 AFF2P51816 1311 aa18.58■□□□□ 0.57
XRN1-203ENST00000463916 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
XRN1-203ENST00000463916 NGLY1Q96IV0 654 aa18.55■□□□□ 0.56
XRN1-203ENST00000463916 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
XRN1-203ENST00000463916 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
XRN1-203ENST00000463916 QRICH2Q9H0J4 1663 aa18.55■□□□□ 0.56
XRN1-203ENST00000463916 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
XRN1-203ENST00000463916 NGDNQ8NEJ9 315 aaKnown RBP18.54■□□□□ 0.56
XRN1-203ENST00000463916 CABLES1Q8TDN4 633 aa18.54■□□□□ 0.56
XRN1-203ENST00000463916 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
XRN1-203ENST00000463916 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
XRN1-203ENST00000463916 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
XRN1-203ENST00000463916 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
XRN1-203ENST00000463916 TRPM3Q9HCF6 1732 aaPredicted RBP18.52■□□□□ 0.56
XRN1-203ENST00000463916 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
XRN1-203ENST00000463916 CARD11Q9BXL7 1154 aa18.51■□□□□ 0.55
XRN1-203ENST00000463916 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
XRN1-203ENST00000463916 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
XRN1-203ENST00000463916 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
XRN1-203ENST00000463916 ACEP12821 1306 aa18.5■□□□□ 0.55
XRN1-203ENST00000463916 PLEKHG3A1L390 1219 aa18.5■□□□□ 0.55
XRN1-203ENST00000463916 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
XRN1-203ENST00000463916 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
XRN1-203ENST00000463916 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
XRN1-203ENST00000463916 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
XRN1-203ENST00000463916 USP21Q9UK80 565 aa18.48■□□□□ 0.55
XRN1-203ENST00000463916 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
XRN1-203ENST00000463916 RXRBP28702 533 aa18.48■□□□□ 0.55
XRN1-203ENST00000463916 MARF1Q9Y4F3 1742 aaKnown RBP18.48■□□□□ 0.55
XRN1-203ENST00000463916 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
XRN1-203ENST00000463916 PPIP5K1Q6PFW1 1433 aa18.47■□□□□ 0.55
XRN1-203ENST00000463916 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
XRN1-203ENST00000463916 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
XRN1-203ENST00000463916 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
XRN1-203ENST00000463916 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms