RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 PRDM9Q9NQV7 894 aa9.7□□□□□ -0.86
ITM2B-203ENST00000463839 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
ITM2B-203ENST00000463839 SMPD1P17405 629 aa9.69□□□□□ -0.86
ITM2B-203ENST00000463839 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
ITM2B-203ENST00000463839 TTC24A2A3L6 582 aaPredicted RBP9.68□□□□□ -0.86
ITM2B-203ENST00000463839 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
ITM2B-203ENST00000463839 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
ITM2B-203ENST00000463839 MMP16P51512 607 aa9.67□□□□□ -0.86
ITM2B-203ENST00000463839 PHOX2BQ99453 314 aa9.67□□□□□ -0.86
ITM2B-203ENST00000463839 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
ITM2B-203ENST00000463839 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
ITM2B-203ENST00000463839 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
ITM2B-203ENST00000463839 TRIM32Q13049 653 aa9.65□□□□□ -0.86
ITM2B-203ENST00000463839 LCE2CQ5TA81 110 aa9.65□□□□□ -0.86
ITM2B-203ENST00000463839 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
ITM2B-203ENST00000463839 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
ITM2B-203ENST00000463839 TRIM47Q96LD4 638 aa9.64□□□□□ -0.87
ITM2B-203ENST00000463839 Q3C1V9 767 aa9.63□□□□□ -0.87
ITM2B-203ENST00000463839 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
ITM2B-203ENST00000463839 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
ITM2B-203ENST00000463839 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
ITM2B-203ENST00000463839 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
ITM2B-203ENST00000463839 MRGPRX2Q96LB1 330 aa9.62□□□□□ -0.87
ITM2B-203ENST00000463839 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
ITM2B-203ENST00000463839 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
ITM2B-203ENST00000463839 J3QL48 77 aa9.59□□□□□ -0.87
ITM2B-203ENST00000463839 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
ITM2B-203ENST00000463839 CD46P15529 392 aa9.57□□□□□ -0.88
ITM2B-203ENST00000463839 HPS1Q92902 700 aa9.57□□□□□ -0.88
ITM2B-203ENST00000463839 USB1Q9BQ65 265 aaKnown RBP9.57□□□□□ -0.88
ITM2B-203ENST00000463839 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
ITM2B-203ENST00000463839 WNT7BP56706 349 aa9.56□□□□□ -0.88
ITM2B-203ENST00000463839 SKOR1P84550 965 aa9.54□□□□□ -0.88
ITM2B-203ENST00000463839 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
ITM2B-203ENST00000463839 BCANQ96GW7 911 aa9.54□□□□□ -0.88
ITM2B-203ENST00000463839 KDM4AO75164 1064 aa9.52□□□□□ -0.89
ITM2B-203ENST00000463839 USP46P62068 366 aa9.52□□□□□ -0.89
ITM2B-203ENST00000463839 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
ITM2B-203ENST00000463839 SIAH2O43255 324 aa9.49□□□□□ -0.89
ITM2B-203ENST00000463839 GPIHBP1Q8IV16 184 aa9.48□□□□□ -0.89
ITM2B-203ENST00000463839 LORP23490 312 aaPredicted RBP9.47□□□□□ -0.89
ITM2B-203ENST00000463839 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
ITM2B-203ENST00000463839 NXF1Q9UBU9 619 aaKnown RBP9.47□□□□□ -0.89
ITM2B-203ENST00000463839 HOXA2O43364 376 aa9.46□□□□□ -0.9
ITM2B-203ENST00000463839 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
ITM2B-203ENST00000463839 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
ITM2B-203ENST00000463839 JUNDP17535 347 aa9.45□□□□□ -0.9
ITM2B-203ENST00000463839 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
ITM2B-203ENST00000463839 HLA-CQ95604 372 aa9.45□□□□□ -0.9
ITM2B-203ENST00000463839 FAM181BA6NEQ2 426 aa9.44□□□□□ -0.9
ITM2B-203ENST00000463839 ALDH1A1P00352 501 aa9.44□□□□□ -0.9
ITM2B-203ENST00000463839 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
ITM2B-203ENST00000463839 IRF6O14896 467 aa9.42□□□□□ -0.9
ITM2B-203ENST00000463839 GMPRP36959 345 aa9.41□□□□□ -0.9
ITM2B-203ENST00000463839 PTCRAQ6ISU1 281 aaPredicted RBP9.41□□□□□ -0.9
ITM2B-203ENST00000463839 IRF7Q92985 503 aa9.41□□□□□ -0.9
ITM2B-203ENST00000463839 H3BM21 787 aa9.4□□□□□ -0.9
ITM2B-203ENST00000463839 RETREG3Q86VR2 466 aa9.4□□□□□ -0.9
ITM2B-203ENST00000463839 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
ITM2B-203ENST00000463839 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
ITM2B-203ENST00000463839 NUDT12Q9BQG2 462 aa9.39□□□□□ -0.91
ITM2B-203ENST00000463839 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
ITM2B-203ENST00000463839 MINK1Q8N4C8 1332 aaPredicted RBP9.38□□□□□ -0.91
ITM2B-203ENST00000463839 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
ITM2B-203ENST00000463839 EHBP1Q8NDI1 1231 aa9.38□□□□□ -0.91
ITM2B-203ENST00000463839 BMP1P13497 986 aa9.37□□□□□ -0.91
ITM2B-203ENST00000463839 GUCA2AQ02747 115 aa9.37□□□□□ -0.91
ITM2B-203ENST00000463839 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
ITM2B-203ENST00000463839 SH3BP2P78314 561 aa9.36□□□□□ -0.91
ITM2B-203ENST00000463839 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
ITM2B-203ENST00000463839 MPNDQ8N594 471 aa9.36□□□□□ -0.91
ITM2B-203ENST00000463839 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
ITM2B-203ENST00000463839 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
ITM2B-203ENST00000463839 LOC100996750A0A140TA64 210 aa9.34□□□□□ -0.91
ITM2B-203ENST00000463839 KRTAP4-6Q9BYQ5 205 aa9.34□□□□□ -0.91
ITM2B-203ENST00000463839 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
ITM2B-203ENST00000463839 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
ITM2B-203ENST00000463839 CCNYL3P0C7X3 344 aa9.33□□□□□ -0.92
ITM2B-203ENST00000463839 CLCN1P35523 988 aa9.33□□□□□ -0.92
ITM2B-203ENST00000463839 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
ITM2B-203ENST00000463839 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
ITM2B-203ENST00000463839 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
ITM2B-203ENST00000463839 PTPRNQ16849 979 aa9.31□□□□□ -0.92
ITM2B-203ENST00000463839 VSIG8P0DPA2 414 aa9.3□□□□□ -0.92
ITM2B-203ENST00000463839 MS4A1P11836 297 aa9.3□□□□□ -0.92
ITM2B-203ENST00000463839 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
ITM2B-203ENST00000463839 FDX1P10109 184 aa9.29□□□□□ -0.92
ITM2B-203ENST00000463839 VEGFBP49765 207 aa9.29□□□□□ -0.92
ITM2B-203ENST00000463839 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
ITM2B-203ENST00000463839 UNC93B1Q9H1C4 597 aa9.29□□□□□ -0.92
ITM2B-203ENST00000463839 VARSP26640 1264 aaKnown RBP9.28□□□□□ -0.92
ITM2B-203ENST00000463839 PLEKHG3A1L390 1219 aa9.27□□□□□ -0.93
ITM2B-203ENST00000463839 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
ITM2B-203ENST00000463839 DESI1Q6ICB0 168 aa9.27□□□□□ -0.93
ITM2B-203ENST00000463839 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
ITM2B-203ENST00000463839 MRPL14Q6P1L8 145 aaKnown RBP9.26□□□□□ -0.93
ITM2B-203ENST00000463839 ZNF511Q8NB15 262 aa9.26□□□□□ -0.93
ITM2B-203ENST00000463839 BAP1Q92560 729 aa9.26□□□□□ -0.93
ITM2B-203ENST00000463839 C6orf229H3BNL8 230 aa9.25□□□□□ -0.93
ITM2B-203ENST00000463839 NNTQ13423 1086 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms