RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 EIF3AQ14152 1382 aaKnown RBP19.42■□□□□ 0.7
COMMD3-205ENST00000463688 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
COMMD3-205ENST00000463688 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
COMMD3-205ENST00000463688 SETD1AO15047 1707 aaKnown RBP19.4■□□□□ 0.7
COMMD3-205ENST00000463688 IFT172Q9UG01 1749 aa19.39■□□□□ 0.69
COMMD3-205ENST00000463688 CDC42BPGQ6DT37 1551 aa19.39■□□□□ 0.69
COMMD3-205ENST00000463688 PRAM1Q96QH2 718 aa19.38■□□□□ 0.69
COMMD3-205ENST00000463688 SOS2Q07890 1332 aaPredicted RBP19.37■□□□□ 0.69
COMMD3-205ENST00000463688 PSME1Q06323 249 aa19.37■□□□□ 0.69
COMMD3-205ENST00000463688 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
COMMD3-205ENST00000463688 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
COMMD3-205ENST00000463688 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
COMMD3-205ENST00000463688 DLC1Q96QB1 1528 aa19.36■□□□□ 0.69
COMMD3-205ENST00000463688 KNDC1Q76NI1 1749 aa19.34■□□□□ 0.69
COMMD3-205ENST00000463688 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
COMMD3-205ENST00000463688 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.69
COMMD3-205ENST00000463688 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-205ENST00000463688 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-205ENST00000463688 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-205ENST00000463688 FOXO3O43524 673 aa19.31■□□□□ 0.68
COMMD3-205ENST00000463688 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
COMMD3-205ENST00000463688 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
COMMD3-205ENST00000463688 PNPLA6Q8IY17 1366 aa19.3■□□□□ 0.68
COMMD3-205ENST00000463688 SHPRHQ149N8 1683 aa19.29■□□□□ 0.68
COMMD3-205ENST00000463688 RGS17Q9UGC6 210 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-205ENST00000463688 PLEKHH1Q9ULM0 1364 aa19.29■□□□□ 0.68
COMMD3-205ENST00000463688 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
COMMD3-205ENST00000463688 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
COMMD3-205ENST00000463688 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
COMMD3-205ENST00000463688 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
COMMD3-205ENST00000463688 ADGRB1O14514 1584 aa19.26■□□□□ 0.67
COMMD3-205ENST00000463688 KRT28Q7Z3Y7 464 aa19.25■□□□□ 0.67
COMMD3-205ENST00000463688 DDX17Q92841 729 aaKnown RBP19.25■□□□□ 0.67
COMMD3-205ENST00000463688 NGLY1Q96IV0 654 aa19.25■□□□□ 0.67
COMMD3-205ENST00000463688 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
COMMD3-205ENST00000463688 RXRBP28702 533 aa19.25■□□□□ 0.67
COMMD3-205ENST00000463688 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
COMMD3-205ENST00000463688 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
COMMD3-205ENST00000463688 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
COMMD3-205ENST00000463688 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
COMMD3-205ENST00000463688 ARHGEF10O15013 1369 aa19.22■□□□□ 0.67
COMMD3-205ENST00000463688 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
COMMD3-205ENST00000463688 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
COMMD3-205ENST00000463688 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
COMMD3-205ENST00000463688 SBNO1A3KN83 1393 aa19.22■□□□□ 0.67
COMMD3-205ENST00000463688 KIF1AQ12756 1690 aa19.21■□□□□ 0.67
COMMD3-205ENST00000463688 AFF2P51816 1311 aa19.21■□□□□ 0.67
COMMD3-205ENST00000463688 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
COMMD3-205ENST00000463688 NGDNQ8NEJ9 315 aaKnown RBP19.19■□□□□ 0.66
COMMD3-205ENST00000463688 LRP6O75581 1613 aa19.19■□□□□ 0.66
COMMD3-205ENST00000463688 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
COMMD3-205ENST00000463688 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
COMMD3-205ENST00000463688 HIRIP3Q9BW71 556 aaPredicted RBP19.18■□□□□ 0.66
COMMD3-205ENST00000463688 TRPC5Q9UL62 973 aaPredicted RBP19.18■□□□□ 0.66
COMMD3-205ENST00000463688 CCDC61Q9Y6R9 512 aa19.18■□□□□ 0.66
COMMD3-205ENST00000463688 PXDNQ92626 1479 aa19.18■□□□□ 0.66
COMMD3-205ENST00000463688 ADGRB2O60241 1585 aa19.18■□□□□ 0.66
COMMD3-205ENST00000463688 KIAA1210Q9ULL0 1709 aa19.18■□□□□ 0.66
COMMD3-205ENST00000463688 FNBP4Q8N3X1 1017 aaPredicted RBP19.17■□□□□ 0.66
COMMD3-205ENST00000463688 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
COMMD3-205ENST00000463688 CENPJQ9HC77 1338 aaPredicted RBP19.17■□□□□ 0.66
COMMD3-205ENST00000463688 FMN2Q9NZ56 1722 aa19.17■□□□□ 0.66
COMMD3-205ENST00000463688 XPCQ01831 940 aaPredicted RBP19.16■□□□□ 0.66
COMMD3-205ENST00000463688 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
COMMD3-205ENST00000463688 USP21Q9UK80 565 aa19.16■□□□□ 0.66
COMMD3-205ENST00000463688 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
COMMD3-205ENST00000463688 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
COMMD3-205ENST00000463688 LMOD2Q6P5Q4 547 aa19.15■□□□□ 0.66
COMMD3-205ENST00000463688 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
COMMD3-205ENST00000463688 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
COMMD3-205ENST00000463688 CDK12Q9NYV4 1490 aaPredicted RBP19.14■□□□□ 0.65
COMMD3-205ENST00000463688 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
COMMD3-205ENST00000463688 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
COMMD3-205ENST00000463688 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
COMMD3-205ENST00000463688 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
COMMD3-205ENST00000463688 ADRA2BP18089 450 aa19.12■□□□□ 0.65
COMMD3-205ENST00000463688 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
COMMD3-205ENST00000463688 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
COMMD3-205ENST00000463688 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
COMMD3-205ENST00000463688 PLEKHG3A1L390 1219 aa19.1■□□□□ 0.65
COMMD3-205ENST00000463688 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
COMMD3-205ENST00000463688 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.65
COMMD3-205ENST00000463688 CLSPNQ9HAW4 1339 aa19.08■□□□□ 0.64
COMMD3-205ENST00000463688 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
COMMD3-205ENST00000463688 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
COMMD3-205ENST00000463688 PRR36Q9H6K5 1346 aa19.06■□□□□ 0.64
COMMD3-205ENST00000463688 NBPF8Q3BBV2 869 aa19.05■□□□□ 0.64
COMMD3-205ENST00000463688 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
COMMD3-205ENST00000463688 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
COMMD3-205ENST00000463688 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
COMMD3-205ENST00000463688 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
COMMD3-205ENST00000463688 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
COMMD3-205ENST00000463688 ACEP12821 1306 aa19.02■□□□□ 0.64
COMMD3-205ENST00000463688 ATP7BP35670 1465 aa19.02■□□□□ 0.64
COMMD3-205ENST00000463688 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
COMMD3-205ENST00000463688 ATRNO75882 1429 aa19.01■□□□□ 0.63
COMMD3-205ENST00000463688 NLRP13Q86W25 1043 aa19■□□□□ 0.63
COMMD3-205ENST00000463688 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
COMMD3-205ENST00000463688 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
COMMD3-205ENST00000463688 ITSN1Q15811 1721 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms