RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
RTCB-202ENST00000463455 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
RTCB-202ENST00000463455 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
RTCB-202ENST00000463455 LAMC1P11047 1609 aa17.54■□□□□ 0.4
RTCB-202ENST00000463455 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
RTCB-202ENST00000463455 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
RTCB-202ENST00000463455 CDC42BPGQ6DT37 1551 aa17.53■□□□□ 0.4
RTCB-202ENST00000463455 C1orf167Q5SNV9 1468 aa17.52■□□□□ 0.4
RTCB-202ENST00000463455 STAC3Q96MF2 364 aa17.51■□□□□ 0.39
RTCB-202ENST00000463455 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
RTCB-202ENST00000463455 C14orf93Q9H972 538 aaKnown RBP17.49■□□□□ 0.39
RTCB-202ENST00000463455 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
RTCB-202ENST00000463455 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
RTCB-202ENST00000463455 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
RTCB-202ENST00000463455 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
RTCB-202ENST00000463455 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
RTCB-202ENST00000463455 LRP6O75581 1613 aa17.44■□□□□ 0.38
RTCB-202ENST00000463455 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
RTCB-202ENST00000463455 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
RTCB-202ENST00000463455 SOS2Q07890 1332 aaPredicted RBP17.43■□□□□ 0.38
RTCB-202ENST00000463455 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
RTCB-202ENST00000463455 STK26Q9P289 416 aa17.42■□□□□ 0.38
RTCB-202ENST00000463455 PNPLA6Q8IY17 1366 aa17.41■□□□□ 0.38
RTCB-202ENST00000463455 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
RTCB-202ENST00000463455 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
RTCB-202ENST00000463455 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
RTCB-202ENST00000463455 WAPLQ7Z5K2 1190 aa17.4■□□□□ 0.38
RTCB-202ENST00000463455 ORAI2Q96SN7 254 aa17.4■□□□□ 0.38
RTCB-202ENST00000463455 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
RTCB-202ENST00000463455 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
RTCB-202ENST00000463455 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
RTCB-202ENST00000463455 PLEKHH1Q9ULM0 1364 aa17.39■□□□□ 0.37
RTCB-202ENST00000463455 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
RTCB-202ENST00000463455 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
RTCB-202ENST00000463455 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
RTCB-202ENST00000463455 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
RTCB-202ENST00000463455 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
RTCB-202ENST00000463455 PXDNQ92626 1479 aa17.35■□□□□ 0.37
RTCB-202ENST00000463455 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
RTCB-202ENST00000463455 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
RTCB-202ENST00000463455 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
RTCB-202ENST00000463455 ANKARQ7Z5J8 1434 aa17.32■□□□□ 0.36
RTCB-202ENST00000463455 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
RTCB-202ENST00000463455 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
RTCB-202ENST00000463455 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
RTCB-202ENST00000463455 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
RTCB-202ENST00000463455 POGKQ9P215 609 aa17.31■□□□□ 0.36
RTCB-202ENST00000463455 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
RTCB-202ENST00000463455 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
RTCB-202ENST00000463455 KIAA1210Q9ULL0 1709 aa17.3■□□□□ 0.36
RTCB-202ENST00000463455 FOXO3O43524 673 aa17.3■□□□□ 0.36
RTCB-202ENST00000463455 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
RTCB-202ENST00000463455 AFF2P51816 1311 aa17.28■□□□□ 0.36
RTCB-202ENST00000463455 NUTM2FA1L443 756 aa17.27■□□□□ 0.36
RTCB-202ENST00000463455 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.36
RTCB-202ENST00000463455 RXRBP28702 533 aa17.26■□□□□ 0.35
RTCB-202ENST00000463455 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
RTCB-202ENST00000463455 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
RTCB-202ENST00000463455 ARHGEF28Q8N1W1 1705 aaKnown RBP17.25■□□□□ 0.35
RTCB-202ENST00000463455 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
RTCB-202ENST00000463455 SPATA31A3Q5VYP0 1347 aa17.24■□□□□ 0.35
RTCB-202ENST00000463455 PSME1Q06323 249 aa17.24■□□□□ 0.35
RTCB-202ENST00000463455 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
RTCB-202ENST00000463455 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
RTCB-202ENST00000463455 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
RTCB-202ENST00000463455 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
RTCB-202ENST00000463455 TNS3Q68CZ2 1445 aa17.23■□□□□ 0.35
RTCB-202ENST00000463455 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
RTCB-202ENST00000463455 NGLY1Q96IV0 654 aa17.23■□□□□ 0.35
RTCB-202ENST00000463455 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
RTCB-202ENST00000463455 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
RTCB-202ENST00000463455 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
RTCB-202ENST00000463455 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
RTCB-202ENST00000463455 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
RTCB-202ENST00000463455 RBM6P78332 1123 aaKnown RBP17.21■□□□□ 0.35
RTCB-202ENST00000463455 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
RTCB-202ENST00000463455 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
RTCB-202ENST00000463455 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
RTCB-202ENST00000463455 TRPC5Q9UL62 973 aaPredicted RBP17.19■□□□□ 0.34
RTCB-202ENST00000463455 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
RTCB-202ENST00000463455 USP21Q9UK80 565 aa17.18■□□□□ 0.34
RTCB-202ENST00000463455 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
RTCB-202ENST00000463455 ATRNO75882 1429 aa17.17■□□□□ 0.34
RTCB-202ENST00000463455 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
RTCB-202ENST00000463455 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
RTCB-202ENST00000463455 ATP7BP35670 1465 aa17.16■□□□□ 0.34
RTCB-202ENST00000463455 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
RTCB-202ENST00000463455 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
RTCB-202ENST00000463455 RGS12O14924 1447 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 SLIT2O94813 1529 aa17.14■□□□□ 0.33
RTCB-202ENST00000463455 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
RTCB-202ENST00000463455 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
RTCB-202ENST00000463455 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
RTCB-202ENST00000463455 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
RTCB-202ENST00000463455 NUDT16Q96DE0 195 aaKnown RBP17.11■□□□□ 0.33
RTCB-202ENST00000463455 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms