RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
R3HDM1-213ENST00000463230 ADGRB2O60241 1585 aa18.83■□□□□ 0.61
R3HDM1-213ENST00000463230 BRINP3Q76B58 766 aa18.83■□□□□ 0.6
R3HDM1-213ENST00000463230 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.6
R3HDM1-213ENST00000463230 PLEKHH1Q9ULM0 1364 aa18.83■□□□□ 0.6
R3HDM1-213ENST00000463230 WAPLQ7Z5K2 1190 aa18.82■□□□□ 0.6
R3HDM1-213ENST00000463230 FMN2Q9NZ56 1722 aa18.82■□□□□ 0.6
R3HDM1-213ENST00000463230 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
R3HDM1-213ENST00000463230 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
R3HDM1-213ENST00000463230 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
R3HDM1-213ENST00000463230 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
R3HDM1-213ENST00000463230 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
R3HDM1-213ENST00000463230 POGKQ9P215 609 aa18.79■□□□□ 0.6
R3HDM1-213ENST00000463230 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
R3HDM1-213ENST00000463230 MED1Q15648 1581 aaPredicted RBP18.77■□□□□ 0.6
R3HDM1-213ENST00000463230 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
R3HDM1-213ENST00000463230 TONSLQ96HA7 1378 aa18.77■□□□□ 0.6
R3HDM1-213ENST00000463230 JCADQ9P266 1359 aa18.77■□□□□ 0.6
R3HDM1-213ENST00000463230 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
R3HDM1-213ENST00000463230 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
R3HDM1-213ENST00000463230 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
R3HDM1-213ENST00000463230 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
R3HDM1-213ENST00000463230 ANKARQ7Z5J8 1434 aa18.76■□□□□ 0.59
R3HDM1-213ENST00000463230 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
R3HDM1-213ENST00000463230 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
R3HDM1-213ENST00000463230 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 TULP4Q9NRJ4 1543 aa18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 DISP3Q9P2K9 1392 aa18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 SOS2Q07890 1332 aaPredicted RBP18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 NPHP3Q7Z494 1330 aa18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
R3HDM1-213ENST00000463230 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
R3HDM1-213ENST00000463230 TIMELESSQ9UNS1 1208 aa18.69■□□□□ 0.58
R3HDM1-213ENST00000463230 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
R3HDM1-213ENST00000463230 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
R3HDM1-213ENST00000463230 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
R3HDM1-213ENST00000463230 USP32Q8NFA0 1604 aa18.68■□□□□ 0.58
R3HDM1-213ENST00000463230 WASLO00401 505 aaPredicted RBP18.68■□□□□ 0.58
R3HDM1-213ENST00000463230 MINK1Q8N4C8 1332 aaPredicted RBP18.67■□□□□ 0.58
R3HDM1-213ENST00000463230 PXDNQ92626 1479 aa18.66■□□□□ 0.58
R3HDM1-213ENST00000463230 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
R3HDM1-213ENST00000463230 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
R3HDM1-213ENST00000463230 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
R3HDM1-213ENST00000463230 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
R3HDM1-213ENST00000463230 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
R3HDM1-213ENST00000463230 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
R3HDM1-213ENST00000463230 PNPLA6Q8IY17 1366 aa18.63■□□□□ 0.57
R3HDM1-213ENST00000463230 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
R3HDM1-213ENST00000463230 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
R3HDM1-213ENST00000463230 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
R3HDM1-213ENST00000463230 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
R3HDM1-213ENST00000463230 ATP7BP35670 1465 aa18.61■□□□□ 0.57
R3HDM1-213ENST00000463230 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
R3HDM1-213ENST00000463230 FOXO3O43524 673 aa18.6■□□□□ 0.57
R3HDM1-213ENST00000463230 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
R3HDM1-213ENST00000463230 PSME1Q06323 249 aa18.59■□□□□ 0.57
R3HDM1-213ENST00000463230 PRR36Q9H6K5 1346 aa18.59■□□□□ 0.57
R3HDM1-213ENST00000463230 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
R3HDM1-213ENST00000463230 CDK19Q9BWU1 502 aa18.58■□□□□ 0.57
R3HDM1-213ENST00000463230 LRP6O75581 1613 aa18.58■□□□□ 0.56
R3HDM1-213ENST00000463230 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
R3HDM1-213ENST00000463230 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
R3HDM1-213ENST00000463230 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
R3HDM1-213ENST00000463230 TNS3Q68CZ2 1445 aa18.56■□□□□ 0.56
R3HDM1-213ENST00000463230 SPATA31A3Q5VYP0 1347 aa18.55■□□□□ 0.56
R3HDM1-213ENST00000463230 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
R3HDM1-213ENST00000463230 EVC2Q86UK5 1308 aa18.55■□□□□ 0.56
R3HDM1-213ENST00000463230 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
R3HDM1-213ENST00000463230 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
R3HDM1-213ENST00000463230 ARHGEF10O15013 1369 aa18.53■□□□□ 0.56
R3HDM1-213ENST00000463230 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
R3HDM1-213ENST00000463230 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
R3HDM1-213ENST00000463230 MEX3CQ5U5Q3 659 aaKnown RBP18.53■□□□□ 0.56
R3HDM1-213ENST00000463230 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
R3HDM1-213ENST00000463230 SRPK2P78362 688 aaKnown RBP18.51■□□□□ 0.55
R3HDM1-213ENST00000463230 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
R3HDM1-213ENST00000463230 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
R3HDM1-213ENST00000463230 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
R3HDM1-213ENST00000463230 NGDNQ8NEJ9 315 aaKnown RBP18.5■□□□□ 0.55
R3HDM1-213ENST00000463230 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
R3HDM1-213ENST00000463230 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
R3HDM1-213ENST00000463230 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
R3HDM1-213ENST00000463230 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
R3HDM1-213ENST00000463230 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
R3HDM1-213ENST00000463230 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
R3HDM1-213ENST00000463230 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
R3HDM1-213ENST00000463230 ZNF772Q68DY9 489 aaPredicted RBP18.48■□□□□ 0.55
R3HDM1-213ENST00000463230 PUS7Q96PZ0 661 aaKnown RBP18.48■□□□□ 0.55
R3HDM1-213ENST00000463230 RGS17Q9UGC6 210 aaPredicted RBP18.48■□□□□ 0.55
R3HDM1-213ENST00000463230 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
R3HDM1-213ENST00000463230 ABCA3Q99758 1704 aa18.45■□□□□ 0.54
R3HDM1-213ENST00000463230 ACEP12821 1306 aa18.45■□□□□ 0.54
R3HDM1-213ENST00000463230 ILDR2Q71H61 639 aa18.44■□□□□ 0.54
R3HDM1-213ENST00000463230 USP47Q96K76 1375 aa18.43■□□□□ 0.54
R3HDM1-213ENST00000463230 AFF2P51816 1311 aa18.42■□□□□ 0.54
R3HDM1-213ENST00000463230 AKAP12Q02952 1782 aa18.41■□□□□ 0.54
R3HDM1-213ENST00000463230 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
R3HDM1-213ENST00000463230 C8orf37Q96NL8 207 aa18.41■□□□□ 0.54
R3HDM1-213ENST00000463230 TESK2Q96S53 571 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms