RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 COL22A1Q8NFW1 1626 aaPredicted RBP30.75■■■□□ 2.51
COMMD2-201ENST00000463077 ATRNO75882 1429 aa30.74■■■□□ 2.51
COMMD2-201ENST00000463077 MYOM2P54296 1465 aa30.7■■■□□ 2.51
COMMD2-201ENST00000463077 NPHP3Q7Z494 1330 aa30.69■■■□□ 2.5
COMMD2-201ENST00000463077 BCL9LQ86UU0 1499 aa30.67■■■□□ 2.5
COMMD2-201ENST00000463077 ESCO1Q5FWF5 840 aa30.66■■■□□ 2.5
COMMD2-201ENST00000463077 PXDNQ92626 1479 aa30.65■■■□□ 2.5
COMMD2-201ENST00000463077 PPLO60437 1756 aa30.65■■■□□ 2.5
COMMD2-201ENST00000463077 CDC42BPGQ6DT37 1551 aa30.65■■■□□ 2.5
COMMD2-201ENST00000463077 EP400Q96L91 3159 aa30.64■■■□□ 2.5
COMMD2-201ENST00000463077 CCDC125Q86Z20 511 aa30.62■■■□□ 2.49
COMMD2-201ENST00000463077 FOXO3O43524 673 aa30.61■■■□□ 2.49
COMMD2-201ENST00000463077 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
COMMD2-201ENST00000463077 SLC4A1APQ9BWU0 796 aaKnown RBP30.61■■■□□ 2.49
COMMD2-201ENST00000463077 ACIN1Q9UKV3 1341 aaKnown RBP30.6■■■□□ 2.49
COMMD2-201ENST00000463077 RAB3GAP2Q9H2M9 1393 aa30.59■■■□□ 2.49
COMMD2-201ENST00000463077 FOXD1Q16676 465 aa30.59■■■□□ 2.49
COMMD2-201ENST00000463077 GJD4Q96KN9 370 aaPredicted RBP30.59■■■□□ 2.49
COMMD2-201ENST00000463077 HRCP23327 699 aa30.58■■■□□ 2.49
COMMD2-201ENST00000463077 ZRANB1Q9UGI0 708 aa30.58■■■□□ 2.49
COMMD2-201ENST00000463077 TECPR2O15040 1411 aa30.57■■■□□ 2.48
COMMD2-201ENST00000463077 MARF1Q9Y4F3 1742 aaKnown RBP30.57■■■□□ 2.48
COMMD2-201ENST00000463077 LRPPRCP42704 1394 aaKnown RBP30.56■■■□□ 2.48
COMMD2-201ENST00000463077 ADGRF5Q8IZF2 1346 aa30.56■■■□□ 2.48
COMMD2-201ENST00000463077 XPCQ01831 940 aaPredicted RBP30.55■■■□□ 2.48
COMMD2-201ENST00000463077 WAPLQ7Z5K2 1190 aa30.54■■■□□ 2.48
COMMD2-201ENST00000463077 ABCC11Q96J66 1382 aa30.53■■■□□ 2.48
COMMD2-201ENST00000463077 SPATA31A3Q5VYP0 1347 aa30.49■■■□□ 2.47
COMMD2-201ENST00000463077 SLIT2O94813 1529 aa30.49■■■□□ 2.47
COMMD2-201ENST00000463077 UNC5CLQ8IV45 518 aa30.49■■■□□ 2.47
COMMD2-201ENST00000463077 STK26Q9P289 416 aa30.49■■■□□ 2.47
COMMD2-201ENST00000463077 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.49■■■□□ 2.47
COMMD2-201ENST00000463077 SPATA31E1Q6ZUB1 1445 aa30.48■■■□□ 2.47
COMMD2-201ENST00000463077 NUTM2FA1L443 756 aa30.48■■■□□ 2.47
COMMD2-201ENST00000463077 ANKRD30BQ9BXX2 1392 aa30.46■■■□□ 2.47
COMMD2-201ENST00000463077 PLEKHH1Q9ULM0 1364 aa30.46■■■□□ 2.47
COMMD2-201ENST00000463077 RALGAPBQ86X10 1494 aa30.44■■■□□ 2.46
COMMD2-201ENST00000463077 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
COMMD2-201ENST00000463077 TMEM132EQ6IEE7 984 aa30.44■■■□□ 2.46
COMMD2-201ENST00000463077 MPHOSPH9Q99550 1183 aa30.44■■■□□ 2.46
COMMD2-201ENST00000463077 GLI3P10071 1580 aa30.44■■■□□ 2.46
COMMD2-201ENST00000463077 CCDC144AA2RUR9 1427 aa30.43■■■□□ 2.46
COMMD2-201ENST00000463077 SIRT1Q96EB6 747 aa30.43■■■□□ 2.46
COMMD2-201ENST00000463077 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
COMMD2-201ENST00000463077 FMN2Q9NZ56 1722 aa30.42■■■□□ 2.46
COMMD2-201ENST00000463077 KRT28Q7Z3Y7 464 aa30.41■■■□□ 2.46
COMMD2-201ENST00000463077 BLMP54132 1417 aaPredicted RBP30.4■■■□□ 2.46
COMMD2-201ENST00000463077 IFT172Q9UG01 1749 aa30.4■■■□□ 2.46
COMMD2-201ENST00000463077 PIK3C2GO75747 1445 aa30.39■■■□□ 2.46
COMMD2-201ENST00000463077 KIF1AQ12756 1690 aa30.39■■■□□ 2.45
COMMD2-201ENST00000463077 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
COMMD2-201ENST00000463077 ONECUT3O60422 494 aaPredicted RBP30.36■■■□□ 2.45
COMMD2-201ENST00000463077 USP32Q8NFA0 1604 aa30.36■■■□□ 2.45
COMMD2-201ENST00000463077 VPS72Q15906 364 aa30.34■■■□□ 2.45
COMMD2-201ENST00000463077 BRWD3Q6RI45 1802 aa30.32■■■□□ 2.44
COMMD2-201ENST00000463077 SEPT12Q8IYM1 358 aa30.32■■■□□ 2.44
COMMD2-201ENST00000463077 C14orf93Q9H972 538 aaKnown RBP30.32■■■□□ 2.44
COMMD2-201ENST00000463077 PHF8Q9UPP1 1060 aa30.32■■■□□ 2.44
COMMD2-201ENST00000463077 TNS3Q68CZ2 1445 aa30.31■■■□□ 2.44
COMMD2-201ENST00000463077 PSME1Q06323 249 aa30.31■■■□□ 2.44
COMMD2-201ENST00000463077 DEFB132Q7Z7B7 95 aa30.3■■■□□ 2.44
COMMD2-201ENST00000463077 SBNO1A3KN83 1393 aa30.29■■■□□ 2.44
COMMD2-201ENST00000463077 CABLES1Q8TDN4 633 aa30.29■■■□□ 2.44
COMMD2-201ENST00000463077 RGPD8O14715 1765 aaPredicted RBP30.27■■■□□ 2.44
COMMD2-201ENST00000463077 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.44
COMMD2-201ENST00000463077 NWD2Q9ULI1 1742 aa30.25■■■□□ 2.43
COMMD2-201ENST00000463077 HAP1P54257 671 aaPredicted RBP30.24■■■□□ 2.43
COMMD2-201ENST00000463077 SF3B2Q13435 895 aaKnown RBP30.23■■■□□ 2.43
COMMD2-201ENST00000463077 DHX57Q6P158 1386 aaKnown RBP30.23■■■□□ 2.43
COMMD2-201ENST00000463077 FAM83GA6ND36 823 aa30.22■■■□□ 2.43
COMMD2-201ENST00000463077 CFAP70Q5T0N1 1121 aa30.22■■■□□ 2.43
COMMD2-201ENST00000463077 KRT27Q7Z3Y8 459 aa30.22■■■□□ 2.43
COMMD2-201ENST00000463077 ARHGEF10O15013 1369 aa30.22■■■□□ 2.43
COMMD2-201ENST00000463077 PLCH1Q4KWH8 1693 aa30.21■■■□□ 2.43
COMMD2-201ENST00000463077 PRAM1Q96QH2 718 aa30.19■■■□□ 2.42
COMMD2-201ENST00000463077 ABCA3Q99758 1704 aa30.18■■■□□ 2.42
COMMD2-201ENST00000463077 CCDC9Q9Y3X0 531 aaKnown RBP30.17■■■□□ 2.42
COMMD2-201ENST00000463077 ANKARQ7Z5J8 1434 aa30.16■■■□□ 2.42
COMMD2-201ENST00000463077 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
COMMD2-201ENST00000463077 LMOD2Q6P5Q4 547 aa30.15■■■□□ 2.42
COMMD2-201ENST00000463077 DLC1Q96QB1 1528 aa30.14■■■□□ 2.42
COMMD2-201ENST00000463077 PLEKHG5O94827 1062 aa30.13■■■□□ 2.41
COMMD2-201ENST00000463077 SAFB2Q14151 953 aaKnown RBP eCLIP30.13■■■□□ 2.41
COMMD2-201ENST00000463077 PMFBP1Q8TBY8 1022 aa30.13■■■□□ 2.41
COMMD2-201ENST00000463077 LRP5O75197 1615 aa30.12■■■□□ 2.41
COMMD2-201ENST00000463077 BAG6P46379 1132 aa30.09■■■□□ 2.41
COMMD2-201ENST00000463077 NRAPQ86VF7 1730 aa30.09■■■□□ 2.41
COMMD2-201ENST00000463077 POGKQ9P215 609 aa30.09■■■□□ 2.41
COMMD2-201ENST00000463077 TRPM3Q9HCF6 1732 aaPredicted RBP30.08■■■□□ 2.41
COMMD2-201ENST00000463077 ADGRB2O60241 1585 aa30.08■■■□□ 2.41
COMMD2-201ENST00000463077 FAM98CQ17RN3 349 aaKnown RBP30.08■■■□□ 2.41
COMMD2-201ENST00000463077 BTG4Q9NY30 223 aa30.08■■■□□ 2.41
COMMD2-201ENST00000463077 ALS2Q96Q42 1657 aa30.04■■■□□ 2.4
COMMD2-201ENST00000463077 ADGRB1O14514 1584 aa30.04■■■□□ 2.4
COMMD2-201ENST00000463077 PRR36Q9H6K5 1346 aa30.03■■■□□ 2.4
COMMD2-201ENST00000463077 COL14A1Q05707 1796 aaKnown RBP30.03■■■□□ 2.4
COMMD2-201ENST00000463077 GPRASP1Q5JY77 1395 aa30.03■■■□□ 2.4
COMMD2-201ENST00000463077 SPATA31A5Q5VU36 1347 aa30.02■■■□□ 2.4
COMMD2-201ENST00000463077 SPATA31A7Q8IWB4 1347 aa30.02■■■□□ 2.4
COMMD2-201ENST00000463077 PSDA5PKW4 1024 aaPredicted RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms