RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
KDM3A-208ENST00000463013 KIFC2Q96AC6 838 aa8.98□□□□□ -0.97
KDM3A-208ENST00000463013 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
KDM3A-208ENST00000463013 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
KDM3A-208ENST00000463013 SALL2Q9Y467 1007 aaPredicted RBP8.97□□□□□ -0.97
KDM3A-208ENST00000463013 WNT7AO00755 349 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 MORN1Q5T089 497 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 SLC16A10Q8TF71 515 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 ATP13A2Q9NQ11 1180 aa8.96□□□□□ -0.98
KDM3A-208ENST00000463013 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
KDM3A-208ENST00000463013 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
KDM3A-208ENST00000463013 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
KDM3A-208ENST00000463013 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
KDM3A-208ENST00000463013 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
KDM3A-208ENST00000463013 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
KDM3A-208ENST00000463013 IRF6O14896 467 aa8.92□□□□□ -0.98
KDM3A-208ENST00000463013 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
KDM3A-208ENST00000463013 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
KDM3A-208ENST00000463013 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 SMPD1P17405 629 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 FUT2Q10981 343 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
KDM3A-208ENST00000463013 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
KDM3A-208ENST00000463013 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
KDM3A-208ENST00000463013 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
KDM3A-208ENST00000463013 TRIM32Q13049 653 aa8.88□□□□□ -0.99
KDM3A-208ENST00000463013 Q3C1V9 767 aa8.88□□□□□ -0.99
KDM3A-208ENST00000463013 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 GCGRP47871 477 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 TPRNQ4KMQ1 711 aa8.87□□□□□ -0.99
KDM3A-208ENST00000463013 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 MRGPRX2Q96LB1 330 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 PHOX2BQ99453 314 aa8.86□□□□□ -0.99
KDM3A-208ENST00000463013 AK7Q96M32 723 aa8.85□□□□□ -0.99
KDM3A-208ENST00000463013 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
KDM3A-208ENST00000463013 J3QL48 77 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 IRF7Q92985 503 aa8.84□□□□□ -0.99
KDM3A-208ENST00000463013 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
KDM3A-208ENST00000463013 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
KDM3A-208ENST00000463013 NLRP7Q8WX94 980 aa8.82□□□□□ -1
KDM3A-208ENST00000463013 MMP16P51512 607 aa8.81□□□□□ -1
KDM3A-208ENST00000463013 HPS1Q92902 700 aa8.81□□□□□ -1
KDM3A-208ENST00000463013 TRIM66O15016 1216 aa8.8□□□□□ -1
KDM3A-208ENST00000463013 WNT7BP56706 349 aa8.8□□□□□ -1
KDM3A-208ENST00000463013 AMHR2Q16671 573 aa8.79□□□□□ -1
KDM3A-208ENST00000463013 LCE2CQ5TA81 110 aa8.79□□□□□ -1
KDM3A-208ENST00000463013 RC3H1Q5TC82 1133 aaKnown RBP8.79□□□□□ -1
KDM3A-208ENST00000463013 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
KDM3A-208ENST00000463013 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
KDM3A-208ENST00000463013 CLCN1P35523 988 aa8.77□□□□□ -1.01
KDM3A-208ENST00000463013 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
KDM3A-208ENST00000463013 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
KDM3A-208ENST00000463013 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 GMPRP36959 345 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
KDM3A-208ENST00000463013 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
KDM3A-208ENST00000463013 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
KDM3A-208ENST00000463013 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 PDE4DQ08499 809 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
KDM3A-208ENST00000463013 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
KDM3A-208ENST00000463013 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
KDM3A-208ENST00000463013 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
KDM3A-208ENST00000463013 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
KDM3A-208ENST00000463013 H3BM21 787 aa8.71□□□□□ -1.02
KDM3A-208ENST00000463013 USP46P62068 366 aa8.71□□□□□ -1.02
KDM3A-208ENST00000463013 GIGYF2Q6Y7W6 1299 aaKnown RBP8.71□□□□□ -1.02
KDM3A-208ENST00000463013 KDM4AO75164 1064 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 CD46P15529 392 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 EHBP1Q8NDI1 1231 aa8.69□□□□□ -1.02
KDM3A-208ENST00000463013 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
KDM3A-208ENST00000463013 SKOR1P84550 965 aa8.68□□□□□ -1.02
KDM3A-208ENST00000463013 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
KDM3A-208ENST00000463013 MS4A1P11836 297 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 BMP1P13497 986 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
KDM3A-208ENST00000463013 SIAH2O43255 324 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 VEGFBP49765 207 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 SCARF1Q14162 830 aa8.64□□□□□ -1.03
KDM3A-208ENST00000463013 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
KDM3A-208ENST00000463013 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
KDM3A-208ENST00000463013 JUNDP17535 347 aa8.63□□□□□ -1.03
KDM3A-208ENST00000463013 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
KDM3A-208ENST00000463013 PLEKHG3A1L390 1219 aa8.62□□□□□ -1.03
KDM3A-208ENST00000463013 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
KDM3A-208ENST00000463013 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
KDM3A-208ENST00000463013 ZFP42Q96MM3 310 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
KDM3A-208ENST00000463013 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
KDM3A-208ENST00000463013 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
KDM3A-208ENST00000463013 HOXA2O43364 376 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms