RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 ANP32BQ92688 251 aaKnown RBP14.83□□□□□ -0.03
RBM39-223ENST00000463004 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.03
RBM39-223ENST00000463004 KDM5DQ9BY66 1539 aa14.83□□□□□ -0.04
RBM39-223ENST00000463004 WDR63Q8IWG1 891 aa14.83□□□□□ -0.04
RBM39-223ENST00000463004 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
RBM39-223ENST00000463004 SLC26A8Q96RN1 970 aa14.82□□□□□ -0.04
RBM39-223ENST00000463004 RIMS2Q9UQ26 1411 aa14.82□□□□□ -0.04
RBM39-223ENST00000463004 WASLO00401 505 aaPredicted RBP14.82□□□□□ -0.04
RBM39-223ENST00000463004 DDX19BQ9UMR2 479 aa14.82□□□□□ -0.04
RBM39-223ENST00000463004 RRP7AQ9Y3A4 280 aaKnown RBP14.82□□□□□ -0.04
RBM39-223ENST00000463004 ABTB2Q8N961 1025 aa14.81□□□□□ -0.04
RBM39-223ENST00000463004 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
RBM39-223ENST00000463004 MCCP23508 829 aa14.81□□□□□ -0.04
RBM39-223ENST00000463004 EVA1CP58658 441 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 RAPGEF4Q8WZA2 1011 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 GOLGA6L22H0YM25 854 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 KCNH5Q8NCM2 988 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 FCHSD2O94868 740 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 ESCO1Q5FWF5 840 aa14.8□□□□□ -0.04
RBM39-223ENST00000463004 TTC37Q6PGP7 1564 aa14.79□□□□□ -0.04
RBM39-223ENST00000463004 PLXNC1O60486 1568 aa14.78□□□□□ -0.04
RBM39-223ENST00000463004 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
RBM39-223ENST00000463004 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
RBM39-223ENST00000463004 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
RBM39-223ENST00000463004 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
RBM39-223ENST00000463004 AMOTL2Q9Y2J4 779 aa14.77□□□□□ -0.04
RBM39-223ENST00000463004 PLEKHO1Q53GL0 409 aaPredicted RBP14.77□□□□□ -0.04
RBM39-223ENST00000463004 GPATCH3Q96I76 525 aa14.77□□□□□ -0.04
RBM39-223ENST00000463004 TTC5Q8N0Z6 440 aa14.76□□□□□ -0.05
RBM39-223ENST00000463004 DDX58O95786 925 aaKnown RBP14.75□□□□□ -0.05
RBM39-223ENST00000463004 DZIP1LQ8IYY4 767 aaKnown RBP14.75□□□□□ -0.05
RBM39-223ENST00000463004 C11orf95C9JLR9 678 aaPredicted RBP14.75□□□□□ -0.05
RBM39-223ENST00000463004 NPHP1O15259 732 aa14.75□□□□□ -0.05
RBM39-223ENST00000463004 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
RBM39-223ENST00000463004 NCLP19338 710 aaKnown RBP14.73□□□□□ -0.05
RBM39-223ENST00000463004 PRKAR2BP31323 418 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 PDE3AQ14432 1141 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 HECW2Q9P2P5 1572 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 CCDC9Q9Y3X0 531 aaKnown RBP14.73□□□□□ -0.05
RBM39-223ENST00000463004 TBX22Q9Y458 520 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
RBM39-223ENST00000463004 DISP3Q9P2K9 1392 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 NPC1L1Q9UHC9 1359 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 NEXNQ0ZGT2 675 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 ASXL1Q8IXJ9 1541 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 CDC42BPAQ5VT25 1732 aa14.72□□□□□ -0.05
RBM39-223ENST00000463004 WAPLQ7Z5K2 1190 aa14.71□□□□□ -0.05
RBM39-223ENST00000463004 CLUAP1Q96AJ1 413 aa14.71□□□□□ -0.05
RBM39-223ENST00000463004 SIRT1Q96EB6 747 aa14.71□□□□□ -0.06
RBM39-223ENST00000463004 HMOX1P09601 288 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 TTC21BQ7Z4L5 1316 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 HSCBQ8IWL3 235 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 TRPM2O94759 1503 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 TESK2Q96S53 571 aa14.7□□□□□ -0.06
RBM39-223ENST00000463004 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
RBM39-223ENST00000463004 CEBPAP49715 358 aaPredicted RBP14.69□□□□□ -0.06
RBM39-223ENST00000463004 SLC4A10Q6U841 1118 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 KIAA1211Q6ZU35 1233 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 HSP90AB1P08238 724 aaKnown RBP14.69□□□□□ -0.06
RBM39-223ENST00000463004 KCNJ4P48050 445 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 CRBNQ96SW2 442 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
RBM39-223ENST00000463004 PTPRTO14522 1441 aa14.68□□□□□ -0.06
RBM39-223ENST00000463004 TATP17735 454 aaPredicted RBP14.68□□□□□ -0.06
RBM39-223ENST00000463004 SBNO2Q9Y2G9 1366 aa14.68□□□□□ -0.06
RBM39-223ENST00000463004 NPATQ14207 1427 aa14.68□□□□□ -0.06
RBM39-223ENST00000463004 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
RBM39-223ENST00000463004 HSP90AB4PQ58FF6 505 aa14.67□□□□□ -0.06
RBM39-223ENST00000463004 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
RBM39-223ENST00000463004 ABCA9Q8IUA7 1624 aa14.67□□□□□ -0.06
RBM39-223ENST00000463004 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
RBM39-223ENST00000463004 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
RBM39-223ENST00000463004 CADPS2Q86UW7 1296 aa14.67□□□□□ -0.06
RBM39-223ENST00000463004 EXOC6Q8TAG9 804 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 MYOM2P54296 1465 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 PARD3Q8TEW0 1356 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 SPG7Q9UQ90 795 aa14.66□□□□□ -0.06
RBM39-223ENST00000463004 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
RBM39-223ENST00000463004 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
RBM39-223ENST00000463004 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
RBM39-223ENST00000463004 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
RBM39-223ENST00000463004 INSRP06213 1382 aa14.64□□□□□ -0.07
RBM39-223ENST00000463004 TET3O43151 1660 aa14.64□□□□□ -0.07
RBM39-223ENST00000463004 ELL2O00472 640 aaPredicted RBP14.63□□□□□ -0.07
RBM39-223ENST00000463004 PTMSP20962 102 aa14.63□□□□□ -0.07
RBM39-223ENST00000463004 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
RBM39-223ENST00000463004 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
RBM39-223ENST00000463004 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
RBM39-223ENST00000463004 ZFYVE9O95405 1425 aa14.63□□□□□ -0.07
RBM39-223ENST00000463004 POLR3AO14802 1390 aaPredicted RBP14.63□□□□□ -0.07
RBM39-223ENST00000463004 TMPOP42166 694 aaKnown RBP14.63□□□□□ -0.07
RBM39-223ENST00000463004 GNAI3P08754 354 aa14.63□□□□□ -0.07
RBM39-223ENST00000463004 SLFN5Q08AF3 891 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms