RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PRAG1	Q86YV5	1406 aa		13.81	□□□□□ -0.2
PSMD4-208	ENST00000462970	ADGRB1	O14514	1584 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	PRAM1	Q96QH2	718 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	PHLPP1	O60346	1717 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	KIAA1210	Q9ULL0	1709 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	DCC	P43146	1447 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	FAM135B	Q49AJ0	1406 aa		13.8	□□□□□ -0.2
PSMD4-208	ENST00000462970	NUTM2F	A1L443	756 aa		13.79	□□□□□ -0.2
PSMD4-208	ENST00000462970	CCER1	Q8TC90	406 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD4-208	ENST00000462970	MST1R	Q04912	1400 aa		13.78	□□□□□ -0.2
PSMD4-208	ENST00000462970	NBPF1	Q3BBV0	1214 aa		13.77	□□□□□ -0.21
PSMD4-208	ENST00000462970	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD4-208	ENST00000462970	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.76	□□□□□ -0.21
PSMD4-208	ENST00000462970	CDC42BPG	Q6DT37	1551 aa		13.76	□□□□□ -0.21
PSMD4-208	ENST00000462970	DLC1	Q96QB1	1528 aa		13.76	□□□□□ -0.21
PSMD4-208	ENST00000462970	BRINP3	Q76B58	766 aa		13.75	□□□□□ -0.21
PSMD4-208	ENST00000462970	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD4-208	ENST00000462970	TRPM1	Q7Z4N2	1603 aa		13.75	□□□□□ -0.21
PSMD4-208	ENST00000462970	C1orf167	Q5SNV9	1468 aa		13.74	□□□□□ -0.21
PSMD4-208	ENST00000462970	RGPD8	O14715	1765 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD4-208	ENST00000462970	FMN2	Q9NZ56	1722 aa		13.74	□□□□□ -0.21
PSMD4-208	ENST00000462970	SIRT1	Q96EB6	747 aa		13.74	□□□□□ -0.21
PSMD4-208	ENST00000462970	ROCK2	O75116	1388 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-208	ENST00000462970	ESCO1	Q5FWF5	840 aa		13.73	□□□□□ -0.21
PSMD4-208	ENST00000462970	DDX17	Q92841	729 aa	Known RBP	13.73	□□□□□ -0.21
PSMD4-208	ENST00000462970	ORAI2	Q96SN7	254 aa		13.73	□□□□□ -0.21
PSMD4-208	ENST00000462970	NBPF8	Q3BBV2	869 aa		13.72	□□□□□ -0.21
PSMD4-208	ENST00000462970	RGS17	Q9UGC6	210 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD4-208	ENST00000462970	COL16A1	Q07092	1604 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD4-208	ENST00000462970	NHSL1	Q5SYE7	1610 aa		13.7	□□□□□ -0.22
PSMD4-208	ENST00000462970	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD4-208	ENST00000462970	QRICH2	Q9H0J4	1663 aa		13.69	□□□□□ -0.22
PSMD4-208	ENST00000462970	ADGRB2	O60241	1585 aa		13.68	□□□□□ -0.22
PSMD4-208	ENST00000462970	XPC	Q01831	940 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMD4-208	ENST00000462970	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD4-208	ENST00000462970	CARD11	Q9BXL7	1154 aa		13.67	□□□□□ -0.22
PSMD4-208	ENST00000462970	CLSPN	Q9HAW4	1339 aa		13.66	□□□□□ -0.22
PSMD4-208	ENST00000462970	WASL	O00401	505 aa	Predicted RBP	13.66	□□□□□ -0.22
PSMD4-208	ENST00000462970	FOXO3	O43524	673 aa		13.66	□□□□□ -0.22
PSMD4-208	ENST00000462970	JCAD	Q9P266	1359 aa		13.66	□□□□□ -0.22
PSMD4-208	ENST00000462970	KIF1A	Q12756	1690 aa		13.66	□□□□□ -0.22
PSMD4-208	ENST00000462970	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	NUTM2E	B1AL46	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	PMFBP1	Q8TBY8	1022 aa		13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	EIF3A	Q14152	1382 aa	Known RBP	13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	RALGAPB	Q86X10	1494 aa		13.65	□□□□□ -0.22
PSMD4-208	ENST00000462970	USP32	Q8NFA0	1604 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	POTEA	Q6S8J7	498 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	CDK19	Q9BWU1	502 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	PHF8	Q9UPP1	1060 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	TULP4	Q9NRJ4	1543 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	NPHP3	Q7Z494	1330 aa		13.64	□□□□□ -0.23
PSMD4-208	ENST00000462970	SHPRH	Q149N8	1683 aa		13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	PLEKHG5	O94827	1062 aa		13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	SRPK2	P78362	688 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	MEX3C	Q5U5Q3	659 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	LRRC59	Q96AG4	307 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	ITSN1	Q15811	1721 aa		13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	ANKAR	Q7Z5J8	1434 aa		13.63	□□□□□ -0.23
PSMD4-208	ENST00000462970	PRR36	Q9H6K5	1346 aa		13.62	□□□□□ -0.23
PSMD4-208	ENST00000462970	PSME1	Q06323	249 aa		13.61	□□□□□ -0.23
PSMD4-208	ENST00000462970	NUDT16	Q96DE0	195 aa	Known RBP	13.61	□□□□□ -0.23
PSMD4-208	ENST00000462970	GPRASP1	Q5JY77	1395 aa		13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	LMOD2	Q6P5Q4	547 aa		13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	KRT28	Q7Z3Y7	464 aa		13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	NGDN	Q8NEJ9	315 aa	Known RBP	13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	CABP2	Q9NPB3	220 aa		13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	SOS2	Q07890	1332 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD4-208	ENST00000462970	TIMELESS	Q9UNS1	1208 aa		13.59	□□□□□ -0.23
PSMD4-208	ENST00000462970	PXDN	Q92626	1479 aa		13.59	□□□□□ -0.23
PSMD4-208	ENST00000462970	EVC2	Q86UK5	1308 aa		13.59	□□□□□ -0.23
PSMD4-208	ENST00000462970	PNPLA6	Q8IY17	1366 aa		13.58	□□□□□ -0.23
PSMD4-208	ENST00000462970	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD4-208	ENST00000462970	ATP7B	P35670	1465 aa		13.58	□□□□□ -0.24
PSMD4-208	ENST00000462970	SPATA31A6	Q5VVP1	1343 aa		13.58	□□□□□ -0.24
PSMD4-208	ENST00000462970	TOPAZ1	Q8N9V7	1692 aa		13.56	□□□□□ -0.24
PSMD4-208	ENST00000462970	PAK3	O75914	559 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD4-208	ENST00000462970	ADAMTS2	O95450	1211 aa		13.56	□□□□□ -0.24
PSMD4-208	ENST00000462970	LRP6	O75581	1613 aa		13.56	□□□□□ -0.24
PSMD4-208	ENST00000462970	HAP1	P54257	671 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD4-208	ENST00000462970	CCDC61	Q9Y6R9	512 aa		13.55	□□□□□ -0.24
PSMD4-208	ENST00000462970	PPIP5K1	Q6PFW1	1433 aa		13.55	□□□□□ -0.24
PSMD4-208	ENST00000462970	ST20-MTHFS	A0A0A6YYL1	179 aa		13.54	□□□□□ -0.24
PSMD4-208	ENST00000462970	SPATA31A3	Q5VYP0	1347 aa		13.54	□□□□□ -0.24
PSMD4-208	ENST00000462970	USP47	Q96K76	1375 aa		13.54	□□□□□ -0.24
PSMD4-208	ENST00000462970	ACE	P12821	1306 aa		13.53	□□□□□ -0.24
PSMD4-208	ENST00000462970	TNS3	Q68CZ2	1445 aa		13.53	□□□□□ -0.24
PSMD4-208	ENST00000462970	C8orf37	Q96NL8	207 aa		13.52	□□□□□ -0.25
PSMD4-208	ENST00000462970	CABP1	Q9NZU7	370 aa		13.52	□□□□□ -0.25
PSMD4-208	ENST00000462970	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD4-208	ENST00000462970	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD4-208	ENST00000462970	SBNO1	A3KN83	1393 aa		13.51	□□□□□ -0.25
PSMD4-208	ENST00000462970	TMC1	Q8TDI8	760 aa		13.51	□□□□□ -0.25
PSMD4-208	ENST00000462970	CABLES1	Q8TDN4	633 aa		13.51	□□□□□ -0.25
PSMD4-208	ENST00000462970	ARHGEF10	O15013	1369 aa		13.5	□□□□□ -0.25
PSMD4-208	ENST00000462970	PLEKHG3	A1L390	1219 aa		13.5	□□□□□ -0.25
PSMD4-208	ENST00000462970	NUTM2G	Q5VZR2	741 aa		13.5	□□□□□ -0.25
PSMD4-208	ENST00000462970	NGLY1	Q96IV0	654 aa		13.5	□□□□□ -0.25
PSMD4-208	ENST00000462970	SBNO2	Q9Y2G9	1366 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms