RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
SRRM1-205ENST00000462710 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
SRRM1-205ENST00000462710 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
SRRM1-205ENST00000462710 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
SRRM1-205ENST00000462710 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
SRRM1-205ENST00000462710 SLIT2O94813 1529 aa13.86□□□□□ -0.19
SRRM1-205ENST00000462710 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
SRRM1-205ENST00000462710 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
SRRM1-205ENST00000462710 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
SRRM1-205ENST00000462710 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
SRRM1-205ENST00000462710 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
SRRM1-205ENST00000462710 USP21Q9UK80 565 aa13.85□□□□□ -0.19
SRRM1-205ENST00000462710 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
SRRM1-205ENST00000462710 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
SRRM1-205ENST00000462710 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
SRRM1-205ENST00000462710 GLI3P10071 1580 aa13.83□□□□□ -0.2
SRRM1-205ENST00000462710 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
SRRM1-205ENST00000462710 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
SRRM1-205ENST00000462710 NUTM2DQ5VT03 806 aaPredicted RBP13.81□□□□□ -0.2
SRRM1-205ENST00000462710 NAIPQ13075 1403 aa13.81□□□□□ -0.2
SRRM1-205ENST00000462710 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
SRRM1-205ENST00000462710 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
SRRM1-205ENST00000462710 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
SRRM1-205ENST00000462710 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
SRRM1-205ENST00000462710 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
SRRM1-205ENST00000462710 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
SRRM1-205ENST00000462710 GJD4Q96KN9 370 aaPredicted RBP13.78□□□□□ -0.2
SRRM1-205ENST00000462710 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
SRRM1-205ENST00000462710 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
SRRM1-205ENST00000462710 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
SRRM1-205ENST00000462710 ADGRB2O60241 1585 aa13.77□□□□□ -0.2
SRRM1-205ENST00000462710 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.2
SRRM1-205ENST00000462710 DLC1Q96QB1 1528 aa13.77□□□□□ -0.21
SRRM1-205ENST00000462710 NRAPQ86VF7 1730 aa13.76□□□□□ -0.21
SRRM1-205ENST00000462710 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
SRRM1-205ENST00000462710 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
SRRM1-205ENST00000462710 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
SRRM1-205ENST00000462710 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
SRRM1-205ENST00000462710 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
SRRM1-205ENST00000462710 SPATA31E1Q6ZUB1 1445 aa13.75□□□□□ -0.21
SRRM1-205ENST00000462710 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
SRRM1-205ENST00000462710 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
SRRM1-205ENST00000462710 ADAMTS2O95450 1211 aa13.74□□□□□ -0.21
SRRM1-205ENST00000462710 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
SRRM1-205ENST00000462710 VPS72Q15906 364 aa13.74□□□□□ -0.21
SRRM1-205ENST00000462710 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
SRRM1-205ENST00000462710 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
SRRM1-205ENST00000462710 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
SRRM1-205ENST00000462710 COL14A1Q05707 1796 aaKnown RBP13.72□□□□□ -0.21
SRRM1-205ENST00000462710 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
SRRM1-205ENST00000462710 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.22
SRRM1-205ENST00000462710 ALS2Q96Q42 1657 aa13.7□□□□□ -0.22
SRRM1-205ENST00000462710 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
SRRM1-205ENST00000462710 PSME1Q06323 249 aa13.69□□□□□ -0.22
SRRM1-205ENST00000462710 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
SRRM1-205ENST00000462710 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
SRRM1-205ENST00000462710 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
SRRM1-205ENST00000462710 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
SRRM1-205ENST00000462710 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
SRRM1-205ENST00000462710 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
SRRM1-205ENST00000462710 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
SRRM1-205ENST00000462710 RGPD8O14715 1765 aaPredicted RBP13.64□□□□□ -0.23
SRRM1-205ENST00000462710 RREB1Q92766 1687 aa13.63□□□□□ -0.23
SRRM1-205ENST00000462710 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
SRRM1-205ENST00000462710 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
SRRM1-205ENST00000462710 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
SRRM1-205ENST00000462710 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
SRRM1-205ENST00000462710 FOXO3O43524 673 aa13.61□□□□□ -0.23
SRRM1-205ENST00000462710 RGPD3A6NKT7 1758 aaPredicted RBP13.61□□□□□ -0.23
SRRM1-205ENST00000462710 RGPD4Q7Z3J3 1758 aa13.61□□□□□ -0.23
SRRM1-205ENST00000462710 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
SRRM1-205ENST00000462710 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
SRRM1-205ENST00000462710 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
SRRM1-205ENST00000462710 BAG6P46379 1132 aa13.6□□□□□ -0.23
SRRM1-205ENST00000462710 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
SRRM1-205ENST00000462710 TULP4Q9NRJ4 1543 aa13.6□□□□□ -0.23
SRRM1-205ENST00000462710 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
SRRM1-205ENST00000462710 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
SRRM1-205ENST00000462710 ADGRB1O14514 1584 aa13.59□□□□□ -0.23
SRRM1-205ENST00000462710 ATP7BP35670 1465 aa13.59□□□□□ -0.23
SRRM1-205ENST00000462710 PHRF1Q9P1Y6 1649 aaKnown RBP13.56□□□□□ -0.24
SRRM1-205ENST00000462710 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
SRRM1-205ENST00000462710 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
SRRM1-205ENST00000462710 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
SRRM1-205ENST00000462710 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
SRRM1-205ENST00000462710 HRCP23327 699 aa13.55□□□□□ -0.24
SRRM1-205ENST00000462710 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
SRRM1-205ENST00000462710 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
SRRM1-205ENST00000462710 ITGAEP38570 1179 aa13.54□□□□□ -0.24
SRRM1-205ENST00000462710 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-205ENST00000462710 FAM83GA6ND36 823 aa13.52□□□□□ -0.24
SRRM1-205ENST00000462710 DEFB132Q7Z7B7 95 aa13.52□□□□□ -0.24
SRRM1-205ENST00000462710 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
SRRM1-205ENST00000462710 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.25
SRRM1-205ENST00000462710 PARP4Q9UKK3 1724 aaKnown RBP13.52□□□□□ -0.25
SRRM1-205ENST00000462710 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
SRRM1-205ENST00000462710 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
SRRM1-205ENST00000462710 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
SRRM1-205ENST00000462710 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
SRRM1-205ENST00000462710 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms