RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
DDX39B-216ENST00000462421 MST1RQ04912 1400 aa12.84□□□□□ -0.35
DDX39B-216ENST00000462421 PRAG1Q86YV5 1406 aa12.84□□□□□ -0.35
DDX39B-216ENST00000462421 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
DDX39B-216ENST00000462421 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.35
DDX39B-216ENST00000462421 TECPR2O15040 1411 aa12.83□□□□□ -0.36
DDX39B-216ENST00000462421 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
DDX39B-216ENST00000462421 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
DDX39B-216ENST00000462421 C1orf167Q5SNV9 1468 aa12.83□□□□□ -0.36
DDX39B-216ENST00000462421 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
DDX39B-216ENST00000462421 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-216ENST00000462421 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-216ENST00000462421 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-216ENST00000462421 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
DDX39B-216ENST00000462421 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-216ENST00000462421 NRXN1Q9ULB1 1477 aa12.81□□□□□ -0.36
DDX39B-216ENST00000462421 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
DDX39B-216ENST00000462421 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
DDX39B-216ENST00000462421 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
DDX39B-216ENST00000462421 PSME1Q06323 249 aa12.8□□□□□ -0.36
DDX39B-216ENST00000462421 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
DDX39B-216ENST00000462421 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
DDX39B-216ENST00000462421 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-216ENST00000462421 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
DDX39B-216ENST00000462421 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
DDX39B-216ENST00000462421 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-216ENST00000462421 DLC1Q96QB1 1528 aa12.77□□□□□ -0.37
DDX39B-216ENST00000462421 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
DDX39B-216ENST00000462421 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
DDX39B-216ENST00000462421 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
DDX39B-216ENST00000462421 COL16A1Q07092 1604 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-216ENST00000462421 FOXO3O43524 673 aa12.75□□□□□ -0.37
DDX39B-216ENST00000462421 GPRASP1Q5JY77 1395 aa12.75□□□□□ -0.37
DDX39B-216ENST00000462421 HIRIP3Q9BW71 556 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-216ENST00000462421 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
DDX39B-216ENST00000462421 NGDNQ8NEJ9 315 aaKnown RBP12.74□□□□□ -0.37
DDX39B-216ENST00000462421 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
DDX39B-216ENST00000462421 C8orf37Q96NL8 207 aa12.74□□□□□ -0.37
DDX39B-216ENST00000462421 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
DDX39B-216ENST00000462421 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
DDX39B-216ENST00000462421 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-216ENST00000462421 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-216ENST00000462421 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
DDX39B-216ENST00000462421 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-216ENST00000462421 POTEHQ6S545 545 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 L3MBTL2Q969R5 705 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 NHSL1Q5SYE7 1610 aa12.72□□□□□ -0.37
DDX39B-216ENST00000462421 PNPLA6Q8IY17 1366 aa12.71□□□□□ -0.37
DDX39B-216ENST00000462421 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
DDX39B-216ENST00000462421 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-216ENST00000462421 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
DDX39B-216ENST00000462421 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-216ENST00000462421 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
DDX39B-216ENST00000462421 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
DDX39B-216ENST00000462421 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
DDX39B-216ENST00000462421 AFF2P51816 1311 aa12.68□□□□□ -0.38
DDX39B-216ENST00000462421 RXRBP28702 533 aa12.68□□□□□ -0.38
DDX39B-216ENST00000462421 PCGF6Q9BYE7 350 aa12.68□□□□□ -0.38
DDX39B-216ENST00000462421 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
DDX39B-216ENST00000462421 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
DDX39B-216ENST00000462421 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
DDX39B-216ENST00000462421 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
DDX39B-216ENST00000462421 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
DDX39B-216ENST00000462421 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
DDX39B-216ENST00000462421 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
DDX39B-216ENST00000462421 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
DDX39B-216ENST00000462421 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
DDX39B-216ENST00000462421 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
DDX39B-216ENST00000462421 USP21Q9UK80 565 aa12.65□□□□□ -0.38
DDX39B-216ENST00000462421 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
DDX39B-216ENST00000462421 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
DDX39B-216ENST00000462421 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
DDX39B-216ENST00000462421 LRP6O75581 1613 aa12.64□□□□□ -0.39
DDX39B-216ENST00000462421 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
DDX39B-216ENST00000462421 TRPC5Q9UL62 973 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-216ENST00000462421 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
DDX39B-216ENST00000462421 PXDNQ92626 1479 aa12.64□□□□□ -0.39
DDX39B-216ENST00000462421 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
DDX39B-216ENST00000462421 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
DDX39B-216ENST00000462421 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
DDX39B-216ENST00000462421 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
DDX39B-216ENST00000462421 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
DDX39B-216ENST00000462421 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
DDX39B-216ENST00000462421 CLSPNQ9HAW4 1339 aa12.61□□□□□ -0.39
DDX39B-216ENST00000462421 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
DDX39B-216ENST00000462421 A0A0G2JS52 829 aa12.6□□□□□ -0.39
DDX39B-216ENST00000462421 MYT1Q01538 1121 aa12.6□□□□□ -0.39
DDX39B-216ENST00000462421 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
DDX39B-216ENST00000462421 PPIP5K1Q6PFW1 1433 aa12.59□□□□□ -0.39
DDX39B-216ENST00000462421 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
DDX39B-216ENST00000462421 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
DDX39B-216ENST00000462421 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-216ENST00000462421 ATP7BP35670 1465 aa12.58□□□□□ -0.4
DDX39B-216ENST00000462421 ACEP12821 1306 aa12.58□□□□□ -0.4
DDX39B-216ENST00000462421 ADRA2BP18089 450 aa12.57□□□□□ -0.4
DDX39B-216ENST00000462421 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms