RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TULP4Q9NRJ4 1543 aa18.88■□□□□ 0.61
PBRM1-219ENST00000462207 SIRT1Q96EB6 747 aa18.88■□□□□ 0.61
PBRM1-219ENST00000462207 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
PBRM1-219ENST00000462207 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
PBRM1-219ENST00000462207 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
PBRM1-219ENST00000462207 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
PBRM1-219ENST00000462207 NALCNQ8IZF0 1738 aa18.84■□□□□ 0.61
PBRM1-219ENST00000462207 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
PBRM1-219ENST00000462207 TMF1P82094 1093 aa18.83■□□□□ 0.6
PBRM1-219ENST00000462207 ADGRB2O60241 1585 aa18.83■□□□□ 0.6
PBRM1-219ENST00000462207 POLR3GLQ9BT43 218 aa18.82■□□□□ 0.6
PBRM1-219ENST00000462207 PROSER2Q86WR7 435 aaPredicted RBP18.81■□□□□ 0.6
PBRM1-219ENST00000462207 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
PBRM1-219ENST00000462207 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
PBRM1-219ENST00000462207 ADGRL3Q9HAR2 1447 aa18.79■□□□□ 0.6
PBRM1-219ENST00000462207 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
PBRM1-219ENST00000462207 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
PBRM1-219ENST00000462207 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
PBRM1-219ENST00000462207 CDK19Q9BWU1 502 aa18.76■□□□□ 0.59
PBRM1-219ENST00000462207 MYOM1P52179 1685 aa18.76■□□□□ 0.59
PBRM1-219ENST00000462207 WASLO00401 505 aaPredicted RBP18.76■□□□□ 0.59
PBRM1-219ENST00000462207 SRPK2P78362 688 aaKnown RBP18.76■□□□□ 0.59
PBRM1-219ENST00000462207 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
PBRM1-219ENST00000462207 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
PBRM1-219ENST00000462207 LTBP4Q8N2S1 1624 aa18.75■□□□□ 0.59
PBRM1-219ENST00000462207 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
PBRM1-219ENST00000462207 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
PBRM1-219ENST00000462207 FMN2Q9NZ56 1722 aa18.73■□□□□ 0.59
PBRM1-219ENST00000462207 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
PBRM1-219ENST00000462207 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
PBRM1-219ENST00000462207 USP32Q8NFA0 1604 aa18.72■□□□□ 0.59
PBRM1-219ENST00000462207 ATP7BP35670 1465 aa18.72■□□□□ 0.59
PBRM1-219ENST00000462207 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
PBRM1-219ENST00000462207 NCOA3Q9Y6Q9 1424 aa18.7■□□□□ 0.58
PBRM1-219ENST00000462207 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
PBRM1-219ENST00000462207 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
PBRM1-219ENST00000462207 NUDT16Q96DE0 195 aaKnown RBP18.68■□□□□ 0.58
PBRM1-219ENST00000462207 TMC1Q8TDI8 760 aa18.67■□□□□ 0.58
PBRM1-219ENST00000462207 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
PBRM1-219ENST00000462207 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
PBRM1-219ENST00000462207 MSH6P52701 1360 aa18.67■□□□□ 0.58
PBRM1-219ENST00000462207 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
PBRM1-219ENST00000462207 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
PBRM1-219ENST00000462207 DCCP43146 1447 aa18.66■□□□□ 0.58
PBRM1-219ENST00000462207 PPIP5K1Q6PFW1 1433 aa18.66■□□□□ 0.58
PBRM1-219ENST00000462207 ANKARQ7Z5J8 1434 aa18.65■□□□□ 0.58
PBRM1-219ENST00000462207 CABP1Q9NZU7 370 aa18.64■□□□□ 0.57
PBRM1-219ENST00000462207 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
PBRM1-219ENST00000462207 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
PBRM1-219ENST00000462207 MST1RQ04912 1400 aa18.63■□□□□ 0.57
PBRM1-219ENST00000462207 ATF3P18847 181 aa18.62■□□□□ 0.57
PBRM1-219ENST00000462207 PANK3Q9H999 370 aa18.62■□□□□ 0.57
PBRM1-219ENST00000462207 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
PBRM1-219ENST00000462207 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
PBRM1-219ENST00000462207 C1orf167Q5SNV9 1468 aa18.61■□□□□ 0.57
PBRM1-219ENST00000462207 A0A1W2PP64 1363 aa18.6■□□□□ 0.57
PBRM1-219ENST00000462207 CADPS2Q86UW7 1296 aa18.6■□□□□ 0.57
PBRM1-219ENST00000462207 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
PBRM1-219ENST00000462207 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
PBRM1-219ENST00000462207 PMFBP1Q8TBY8 1022 aa18.59■□□□□ 0.57
PBRM1-219ENST00000462207 ORAI2Q96SN7 254 aa18.57■□□□□ 0.56
PBRM1-219ENST00000462207 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
PBRM1-219ENST00000462207 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
PBRM1-219ENST00000462207 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
PBRM1-219ENST00000462207 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
PBRM1-219ENST00000462207 NSD3Q9BZ95 1437 aa18.56■□□□□ 0.56
PBRM1-219ENST00000462207 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PBRM1-219ENST00000462207 ACEP12821 1306 aa18.55■□□□□ 0.56
PBRM1-219ENST00000462207 PHF8Q9UPP1 1060 aa18.55■□□□□ 0.56
PBRM1-219ENST00000462207 MON2Q7Z3U7 1717 aa18.54■□□□□ 0.56
PBRM1-219ENST00000462207 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
PBRM1-219ENST00000462207 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
PBRM1-219ENST00000462207 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
PBRM1-219ENST00000462207 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
PBRM1-219ENST00000462207 HDGFL2Q7Z4V5 671 aaPredicted RBP18.53■□□□□ 0.56
PBRM1-219ENST00000462207 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
PBRM1-219ENST00000462207 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
PBRM1-219ENST00000462207 NRKQ7Z2Y5 1582 aa18.53■□□□□ 0.56
PBRM1-219ENST00000462207 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
PBRM1-219ENST00000462207 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
PBRM1-219ENST00000462207 USP6P35125 1406 aa18.51■□□□□ 0.55
PBRM1-219ENST00000462207 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
PBRM1-219ENST00000462207 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
PBRM1-219ENST00000462207 FOXO3O43524 673 aa18.49■□□□□ 0.55
PBRM1-219ENST00000462207 DDX17Q92841 729 aaKnown RBP18.49■□□□□ 0.55
PBRM1-219ENST00000462207 EDC4Q6P2E9 1401 aaKnown RBP18.48■□□□□ 0.55
PBRM1-219ENST00000462207 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
PBRM1-219ENST00000462207 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
PBRM1-219ENST00000462207 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
PBRM1-219ENST00000462207 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
PBRM1-219ENST00000462207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.47■□□□□ 0.55
PBRM1-219ENST00000462207 CC2D1BQ5T0F9 858 aaKnown RBP18.47■□□□□ 0.55
PBRM1-219ENST00000462207 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
PBRM1-219ENST00000462207 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
PBRM1-219ENST00000462207 ROBO1Q9Y6N7 1651 aa18.46■□□□□ 0.55
PBRM1-219ENST00000462207 KIF20BQ96Q89 1820 aa18.45■□□□□ 0.54
PBRM1-219ENST00000462207 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
PBRM1-219ENST00000462207 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
PBRM1-219ENST00000462207 TRPM3Q9HCF6 1732 aaPredicted RBP18.44■□□□□ 0.54
PBRM1-219ENST00000462207 PSME1Q06323 249 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms