RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 DCAF11Q8TEB1 546 aa19.34■□□□□ 0.69
C9orf3-210ENST00000462125 DDX17Q92841 729 aaKnown RBP19.33■□□□□ 0.68
C9orf3-210ENST00000462125 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
C9orf3-210ENST00000462125 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
C9orf3-210ENST00000462125 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
C9orf3-210ENST00000462125 SOS2Q07890 1332 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-210ENST00000462125 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
C9orf3-210ENST00000462125 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
C9orf3-210ENST00000462125 CDC42BPGQ6DT37 1551 aa19.29■□□□□ 0.68
C9orf3-210ENST00000462125 SHPRHQ149N8 1683 aa19.28■□□□□ 0.68
C9orf3-210ENST00000462125 ESCO1Q5FWF5 840 aa19.28■□□□□ 0.68
C9orf3-210ENST00000462125 LAMC1P11047 1609 aa19.28■□□□□ 0.68
C9orf3-210ENST00000462125 LRP6O75581 1613 aa19.27■□□□□ 0.68
C9orf3-210ENST00000462125 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
C9orf3-210ENST00000462125 ADGRB1O14514 1584 aa19.25■□□□□ 0.67
C9orf3-210ENST00000462125 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
C9orf3-210ENST00000462125 DLC1Q96QB1 1528 aa19.24■□□□□ 0.67
C9orf3-210ENST00000462125 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
C9orf3-210ENST00000462125 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
C9orf3-210ENST00000462125 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-210ENST00000462125 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-210ENST00000462125 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
C9orf3-210ENST00000462125 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-210ENST00000462125 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
C9orf3-210ENST00000462125 FOXO3O43524 673 aa19.22■□□□□ 0.67
C9orf3-210ENST00000462125 POGKQ9P215 609 aa19.22■□□□□ 0.67
C9orf3-210ENST00000462125 ZNF772Q68DY9 489 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-210ENST00000462125 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
C9orf3-210ENST00000462125 PXDNQ92626 1479 aa19.17■□□□□ 0.66
C9orf3-210ENST00000462125 FMN2Q9NZ56 1722 aa19.17■□□□□ 0.66
C9orf3-210ENST00000462125 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
C9orf3-210ENST00000462125 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-210ENST00000462125 KRT28Q7Z3Y7 464 aa19.14■□□□□ 0.65
C9orf3-210ENST00000462125 AFF2P51816 1311 aa19.14■□□□□ 0.65
C9orf3-210ENST00000462125 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
C9orf3-210ENST00000462125 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
C9orf3-210ENST00000462125 SPATA31A3Q5VYP0 1347 aa19.12■□□□□ 0.65
C9orf3-210ENST00000462125 MINK1Q8N4C8 1332 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-210ENST00000462125 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-210ENST00000462125 ADAMTS2O95450 1211 aa19.12■□□□□ 0.65
C9orf3-210ENST00000462125 NBPF1Q3BBV0 1214 aa19.12■□□□□ 0.65
C9orf3-210ENST00000462125 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
C9orf3-210ENST00000462125 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
C9orf3-210ENST00000462125 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-210ENST00000462125 ADGRB2O60241 1585 aa19.11■□□□□ 0.65
C9orf3-210ENST00000462125 PSME1Q06323 249 aa19.1■□□□□ 0.65
C9orf3-210ENST00000462125 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
C9orf3-210ENST00000462125 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-210ENST00000462125 KIF1AQ12756 1690 aa19.09■□□□□ 0.65
C9orf3-210ENST00000462125 RXRBP28702 533 aa19.09■□□□□ 0.65
C9orf3-210ENST00000462125 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-210ENST00000462125 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.65
C9orf3-210ENST00000462125 EIF3AQ14152 1382 aaKnown RBP19.08■□□□□ 0.65
C9orf3-210ENST00000462125 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.65
C9orf3-210ENST00000462125 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
C9orf3-210ENST00000462125 QTRT2Q9H974 415 aaKnown RBP19.08■□□□□ 0.64
C9orf3-210ENST00000462125 RGPD8O14715 1765 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-210ENST00000462125 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
C9orf3-210ENST00000462125 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
C9orf3-210ENST00000462125 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
C9orf3-210ENST00000462125 USP32Q8NFA0 1604 aa19.06■□□□□ 0.64
C9orf3-210ENST00000462125 RBM6P78332 1123 aaKnown RBP19.04■□□□□ 0.64
C9orf3-210ENST00000462125 USP21Q9UK80 565 aa19.04■□□□□ 0.64
C9orf3-210ENST00000462125 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
C9orf3-210ENST00000462125 ARHGEF28Q8N1W1 1705 aaKnown RBP19.03■□□□□ 0.64
C9orf3-210ENST00000462125 NUDT16Q96DE0 195 aaKnown RBP19.03■□□□□ 0.64
C9orf3-210ENST00000462125 CDK19Q9BWU1 502 aa19.03■□□□□ 0.64
C9orf3-210ENST00000462125 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
C9orf3-210ENST00000462125 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.64
C9orf3-210ENST00000462125 TRPC5Q9UL62 973 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-210ENST00000462125 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
C9orf3-210ENST00000462125 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
C9orf3-210ENST00000462125 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
C9orf3-210ENST00000462125 BCL9LQ86UU0 1499 aa18.98■□□□□ 0.63
C9orf3-210ENST00000462125 NGDNQ8NEJ9 315 aaKnown RBP18.98■□□□□ 0.63
C9orf3-210ENST00000462125 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-210ENST00000462125 PLEKHG3A1L390 1219 aa18.97■□□□□ 0.63
C9orf3-210ENST00000462125 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
C9orf3-210ENST00000462125 ATP7BP35670 1465 aa18.97■□□□□ 0.63
C9orf3-210ENST00000462125 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
C9orf3-210ENST00000462125 ATRNO75882 1429 aa18.96■□□□□ 0.63
C9orf3-210ENST00000462125 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
C9orf3-210ENST00000462125 UNC5CLQ8IV45 518 aa18.94■□□□□ 0.62
C9orf3-210ENST00000462125 SLIT2O94813 1529 aa18.94■□□□□ 0.62
C9orf3-210ENST00000462125 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-210ENST00000462125 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
C9orf3-210ENST00000462125 HAP1P54257 671 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-210ENST00000462125 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
C9orf3-210ENST00000462125 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-210ENST00000462125 MARF1Q9Y4F3 1742 aaKnown RBP18.92■□□□□ 0.62
C9orf3-210ENST00000462125 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-210ENST00000462125 ACEP12821 1306 aa18.92■□□□□ 0.62
C9orf3-210ENST00000462125 RGS12O14924 1447 aa18.91■□□□□ 0.62
C9orf3-210ENST00000462125 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
C9orf3-210ENST00000462125 SRPK2P78362 688 aaKnown RBP18.91■□□□□ 0.62
C9orf3-210ENST00000462125 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
C9orf3-210ENST00000462125 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
C9orf3-210ENST00000462125 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-210ENST00000462125 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
C9orf3-210ENST00000462125 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms