RNA–Protein interactions for RNA: ENST00000462108.5

CDHR4-204, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-204ENST00000462108 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
CDHR4-204ENST00000462108 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
CDHR4-204ENST00000462108 NHSL1Q5SYE7 1610 aa11.28□□□□□ -0.6
CDHR4-204ENST00000462108 AHDC1Q5TGY3 1603 aaPredicted RBP11.28□□□□□ -0.6
CDHR4-204ENST00000462108 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
CDHR4-204ENST00000462108 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.6
CDHR4-204ENST00000462108 ARHGEF28Q8N1W1 1705 aaKnown RBP11.27□□□□□ -0.61
CDHR4-204ENST00000462108 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
CDHR4-204ENST00000462108 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDHR4-204ENST00000462108 PLEKHH1Q9ULM0 1364 aa11.27□□□□□ -0.61
CDHR4-204ENST00000462108 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
CDHR4-204ENST00000462108 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
CDHR4-204ENST00000462108 C1orf167Q5SNV9 1468 aa11.25□□□□□ -0.61
CDHR4-204ENST00000462108 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
CDHR4-204ENST00000462108 L3MBTL2Q969R5 705 aa11.25□□□□□ -0.61
CDHR4-204ENST00000462108 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
CDHR4-204ENST00000462108 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
CDHR4-204ENST00000462108 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
CDHR4-204ENST00000462108 ADGRB2O60241 1585 aa11.24□□□□□ -0.61
CDHR4-204ENST00000462108 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
CDHR4-204ENST00000462108 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
CDHR4-204ENST00000462108 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
CDHR4-204ENST00000462108 POGKQ9P215 609 aa11.22□□□□□ -0.61
CDHR4-204ENST00000462108 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
CDHR4-204ENST00000462108 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
CDHR4-204ENST00000462108 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
CDHR4-204ENST00000462108 JCADQ9P266 1359 aa11.2□□□□□ -0.62
CDHR4-204ENST00000462108 SAFB2Q14151 953 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDHR4-204ENST00000462108 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
CDHR4-204ENST00000462108 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
CDHR4-204ENST00000462108 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
CDHR4-204ENST00000462108 DDX17Q92841 729 aaKnown RBP11.18□□□□□ -0.62
CDHR4-204ENST00000462108 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
CDHR4-204ENST00000462108 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
CDHR4-204ENST00000462108 NUTM2FA1L443 756 aa11.17□□□□□ -0.62
CDHR4-204ENST00000462108 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
CDHR4-204ENST00000462108 ITSN1Q15811 1721 aa11.17□□□□□ -0.62
CDHR4-204ENST00000462108 MINK1Q8N4C8 1332 aaPredicted RBP11.16□□□□□ -0.62
CDHR4-204ENST00000462108 NBPF8Q3BBV2 869 aa11.16□□□□□ -0.62
CDHR4-204ENST00000462108 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
CDHR4-204ENST00000462108 PXDNQ92626 1479 aa11.16□□□□□ -0.62
CDHR4-204ENST00000462108 ANKARQ7Z5J8 1434 aa11.16□□□□□ -0.62
CDHR4-204ENST00000462108 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
CDHR4-204ENST00000462108 SPATA31A6Q5VVP1 1343 aa11.15□□□□□ -0.62
CDHR4-204ENST00000462108 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
CDHR4-204ENST00000462108 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
CDHR4-204ENST00000462108 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.63
CDHR4-204ENST00000462108 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.63
CDHR4-204ENST00000462108 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
CDHR4-204ENST00000462108 COL22A1Q8NFW1 1626 aaPredicted RBP11.14□□□□□ -0.63
CDHR4-204ENST00000462108 FOXO3O43524 673 aa11.14□□□□□ -0.63
CDHR4-204ENST00000462108 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
CDHR4-204ENST00000462108 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
CDHR4-204ENST00000462108 LRP6O75581 1613 aa11.13□□□□□ -0.63
CDHR4-204ENST00000462108 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
CDHR4-204ENST00000462108 TOPAZ1Q8N9V7 1692 aa11.13□□□□□ -0.63
CDHR4-204ENST00000462108 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
CDHR4-204ENST00000462108 RALGAPBQ86X10 1494 aa11.12□□□□□ -0.63
CDHR4-204ENST00000462108 PRR36Q9H6K5 1346 aa11.12□□□□□ -0.63
CDHR4-204ENST00000462108 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
CDHR4-204ENST00000462108 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
CDHR4-204ENST00000462108 ATP7BP35670 1465 aa11.12□□□□□ -0.63
CDHR4-204ENST00000462108 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
CDHR4-204ENST00000462108 TRPM3Q9HCF6 1732 aaPredicted RBP11.11□□□□□ -0.63
CDHR4-204ENST00000462108 RXRBP28702 533 aa11.1□□□□□ -0.63
CDHR4-204ENST00000462108 XPCQ01831 940 aaPredicted RBP11.1□□□□□ -0.63
CDHR4-204ENST00000462108 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
CDHR4-204ENST00000462108 PMFBP1Q8TBY8 1022 aa11.09□□□□□ -0.63
CDHR4-204ENST00000462108 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
CDHR4-204ENST00000462108 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
CDHR4-204ENST00000462108 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
CDHR4-204ENST00000462108 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
CDHR4-204ENST00000462108 SBNO1A3KN83 1393 aa11.08□□□□□ -0.64
CDHR4-204ENST00000462108 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
CDHR4-204ENST00000462108 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
CDHR4-204ENST00000462108 PSME1Q06323 249 aa11.08□□□□□ -0.64
CDHR4-204ENST00000462108 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
CDHR4-204ENST00000462108 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
CDHR4-204ENST00000462108 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
CDHR4-204ENST00000462108 MEX3CQ5U5Q3 659 aaKnown RBP11.07□□□□□ -0.64
CDHR4-204ENST00000462108 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
CDHR4-204ENST00000462108 TNS3Q68CZ2 1445 aa11.07□□□□□ -0.64
CDHR4-204ENST00000462108 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
CDHR4-204ENST00000462108 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
CDHR4-204ENST00000462108 EVC2Q86UK5 1308 aa11.06□□□□□ -0.64
CDHR4-204ENST00000462108 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
CDHR4-204ENST00000462108 PLEKHG3A1L390 1219 aa11.05□□□□□ -0.64
CDHR4-204ENST00000462108 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
CDHR4-204ENST00000462108 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
CDHR4-204ENST00000462108 CABP2Q9NPB3 220 aa11.05□□□□□ -0.64
CDHR4-204ENST00000462108 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
CDHR4-204ENST00000462108 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
CDHR4-204ENST00000462108 PPIP5K1Q6PFW1 1433 aa11.04□□□□□ -0.64
CDHR4-204ENST00000462108 AKAP12Q02952 1782 aa11.04□□□□□ -0.64
CDHR4-204ENST00000462108 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
CDHR4-204ENST00000462108 ACEP12821 1306 aa11.04□□□□□ -0.64
CDHR4-204ENST00000462108 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
CDHR4-204ENST00000462108 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
CDHR4-204ENST00000462108 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
CDHR4-204ENST00000462108 AFF2P51816 1311 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms