RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.94
MSH2-204ENST00000461394 CCDC184Q52MB2 194 aa9.21□□□□□ -0.94
MSH2-204ENST00000461394 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
MSH2-204ENST00000461394 POGKQ9P215 609 aa9.21□□□□□ -0.94
MSH2-204ENST00000461394 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.94
MSH2-204ENST00000461394 MYBBP1AQ9BQG0 1328 aaKnown RBP9.21□□□□□ -0.94
MSH2-204ENST00000461394 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
MSH2-204ENST00000461394 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
MSH2-204ENST00000461394 PROM2Q8N271 834 aa9.19□□□□□ -0.94
MSH2-204ENST00000461394 EVC2Q86UK5 1308 aa9.19□□□□□ -0.94
MSH2-204ENST00000461394 ASXL1Q8IXJ9 1541 aa9.19□□□□□ -0.94
MSH2-204ENST00000461394 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
MSH2-204ENST00000461394 YTHDC2Q9H6S0 1430 aaKnown RBP9.18□□□□□ -0.94
MSH2-204ENST00000461394 SBNO2Q9Y2G9 1366 aa9.18□□□□□ -0.94
MSH2-204ENST00000461394 NLRP1Q9C000 1473 aa9.17□□□□□ -0.94
MSH2-204ENST00000461394 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
MSH2-204ENST00000461394 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
MSH2-204ENST00000461394 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
MSH2-204ENST00000461394 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
MSH2-204ENST00000461394 PARD3Q8TEW0 1356 aa9.16□□□□□ -0.94
MSH2-204ENST00000461394 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
MSH2-204ENST00000461394 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
MSH2-204ENST00000461394 PRAM1Q96QH2 718 aa9.16□□□□□ -0.94
MSH2-204ENST00000461394 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
MSH2-204ENST00000461394 DCAF8L1A6NGE4 600 aa9.15□□□□□ -0.94
MSH2-204ENST00000461394 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
MSH2-204ENST00000461394 EID1Q9Y6B2 187 aa9.15□□□□□ -0.94
MSH2-204ENST00000461394 NRXN3Q9Y4C0 1643 aa9.15□□□□□ -0.94
MSH2-204ENST00000461394 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.95
MSH2-204ENST00000461394 PTPRMP28827 1452 aa9.15□□□□□ -0.95
MSH2-204ENST00000461394 TMEM2Q9UHN6 1383 aa9.14□□□□□ -0.95
MSH2-204ENST00000461394 NEFLP07196 543 aa9.14□□□□□ -0.95
MSH2-204ENST00000461394 CABP2Q9NPB3 220 aa9.14□□□□□ -0.95
MSH2-204ENST00000461394 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
MSH2-204ENST00000461394 NSD3Q9BZ95 1437 aa9.14□□□□□ -0.95
MSH2-204ENST00000461394 LRPPRCP42704 1394 aaKnown RBP9.13□□□□□ -0.95
MSH2-204ENST00000461394 TXNDC2Q86VQ3 553 aa9.13□□□□□ -0.95
MSH2-204ENST00000461394 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
MSH2-204ENST00000461394 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
MSH2-204ENST00000461394 WDR43Q15061 677 aaKnown RBP eCLIP9.11□□□□□ -0.95
MSH2-204ENST00000461394 WAPLQ7Z5K2 1190 aa9.11□□□□□ -0.95
MSH2-204ENST00000461394 THEMISQ8N1K5 641 aaPredicted RBP9.11□□□□□ -0.95
MSH2-204ENST00000461394 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
MSH2-204ENST00000461394 ATAD2Q6PL18 1390 aa9.11□□□□□ -0.95
MSH2-204ENST00000461394 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 ZBED9Q6R2W3 1325 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 USP32Q8NFA0 1604 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 SENP3-EIF4A1A0A087X0R7 540 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 PPP2R1AP30153 589 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 MORC1Q86VD1 984 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 PUS7Q96PZ0 661 aaKnown RBP9.1□□□□□ -0.95
MSH2-204ENST00000461394 CDK19Q9BWU1 502 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 CEP170BQ9Y4F5 1589 aaPredicted RBP9.1□□□□□ -0.95
MSH2-204ENST00000461394 METP08581 1390 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 PLEKHG1Q9ULL1 1385 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 NINLQ9Y2I6 1382 aa9.1□□□□□ -0.95
MSH2-204ENST00000461394 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
MSH2-204ENST00000461394 TERF2IPQ9NYB0 399 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 CPS1P31327 1500 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 ANKRD36BQ8N2N9 1353 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 ABCC11Q96J66 1382 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 NPC1L1Q9UHC9 1359 aa9.09□□□□□ -0.95
MSH2-204ENST00000461394 ITSN1Q15811 1721 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 CGNL1Q0VF96 1302 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 LTKP29376 864 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
MSH2-204ENST00000461394 PAXIP1Q6ZW49 1069 aaPredicted RBP9.08□□□□□ -0.96
MSH2-204ENST00000461394 SLC26A8Q96RN1 970 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 SLIT1O75093 1534 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
MSH2-204ENST00000461394 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
MSH2-204ENST00000461394 SALL2Q9Y467 1007 aaPredicted RBP9.07□□□□□ -0.96
MSH2-204ENST00000461394 ANKRD26Q9UPS8 1709 aa9.07□□□□□ -0.96
MSH2-204ENST00000461394 DIP2AQ14689 1571 aa9.07□□□□□ -0.96
MSH2-204ENST00000461394 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
MSH2-204ENST00000461394 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
MSH2-204ENST00000461394 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
MSH2-204ENST00000461394 ADAMTS13Q76LX8 1427 aa9.05□□□□□ -0.96
MSH2-204ENST00000461394 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
MSH2-204ENST00000461394 NSD2O96028 1365 aa9.05□□□□□ -0.96
MSH2-204ENST00000461394 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
MSH2-204ENST00000461394 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
MSH2-204ENST00000461394 SIRT1Q96EB6 747 aa9.04□□□□□ -0.96
MSH2-204ENST00000461394 CABP1Q9NZU7 370 aa9.04□□□□□ -0.96
MSH2-204ENST00000461394 SUPT16HQ9Y5B9 1047 aaKnown RBP9.04□□□□□ -0.96
MSH2-204ENST00000461394 TECPR2O15040 1411 aa9.04□□□□□ -0.96
MSH2-204ENST00000461394 PPIP5K1Q6PFW1 1433 aa9.04□□□□□ -0.96
MSH2-204ENST00000461394 ROBO2Q9HCK4 1378 aa9.03□□□□□ -0.96
MSH2-204ENST00000461394 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
MSH2-204ENST00000461394 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
MSH2-204ENST00000461394 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
MSH2-204ENST00000461394 TBX22Q9Y458 520 aa9.03□□□□□ -0.96
MSH2-204ENST00000461394 BLMP54132 1417 aaPredicted RBP9.03□□□□□ -0.96
MSH2-204ENST00000461394 SETD1BQ9UPS6 1966 aaKnown RBP9.03□□□□□ -0.96
MSH2-204ENST00000461394 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.96
MSH2-204ENST00000461394 ATP7BP35670 1465 aa9.02□□□□□ -0.96
MSH2-204ENST00000461394 AKAP12Q02952 1782 aa9.02□□□□□ -0.97
MSH2-204ENST00000461394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms