RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 BRWD3Q6RI45 1802 aa19.62■□□□□ 0.73
C9orf78-202ENST00000461349 MYOM2P54296 1465 aa19.61■□□□□ 0.73
C9orf78-202ENST00000461349 ROCK1Q13464 1354 aa19.61■□□□□ 0.73
C9orf78-202ENST00000461349 GJD4Q96KN9 370 aaPredicted RBP19.61■□□□□ 0.73
C9orf78-202ENST00000461349 CLTCL1P53675 1640 aa19.58■□□□□ 0.73
C9orf78-202ENST00000461349 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.73
C9orf78-202ENST00000461349 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
C9orf78-202ENST00000461349 GLI3P10071 1580 aa19.56■□□□□ 0.72
C9orf78-202ENST00000461349 ROBO2Q9HCK4 1378 aa19.56■□□□□ 0.72
C9orf78-202ENST00000461349 PXDNQ92626 1479 aa19.54■□□□□ 0.72
C9orf78-202ENST00000461349 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
C9orf78-202ENST00000461349 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
C9orf78-202ENST00000461349 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
C9orf78-202ENST00000461349 RALGAPBQ86X10 1494 aa19.54■□□□□ 0.72
C9orf78-202ENST00000461349 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
C9orf78-202ENST00000461349 DEFB132Q7Z7B7 95 aa19.52■□□□□ 0.72
C9orf78-202ENST00000461349 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
C9orf78-202ENST00000461349 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
C9orf78-202ENST00000461349 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
C9orf78-202ENST00000461349 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
C9orf78-202ENST00000461349 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
C9orf78-202ENST00000461349 SLIT2O94813 1529 aa19.49■□□□□ 0.71
C9orf78-202ENST00000461349 FOXO3O43524 673 aa19.48■□□□□ 0.71
C9orf78-202ENST00000461349 PPLO60437 1756 aa19.47■□□□□ 0.71
C9orf78-202ENST00000461349 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
C9orf78-202ENST00000461349 NWD2Q9ULI1 1742 aa19.46■□□□□ 0.71
C9orf78-202ENST00000461349 ITGAEP38570 1179 aa19.46■□□□□ 0.71
C9orf78-202ENST00000461349 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
C9orf78-202ENST00000461349 SEPT12Q8IYM1 358 aa19.45■□□□□ 0.7
C9orf78-202ENST00000461349 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
C9orf78-202ENST00000461349 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
C9orf78-202ENST00000461349 BAG6P46379 1132 aa19.42■□□□□ 0.7
C9orf78-202ENST00000461349 KRT27Q7Z3Y8 459 aa19.41■□□□□ 0.7
C9orf78-202ENST00000461349 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
C9orf78-202ENST00000461349 RGPD1P0DJD0 1748 aa19.41■□□□□ 0.7
C9orf78-202ENST00000461349 FMN2Q9NZ56 1722 aa19.41■□□□□ 0.7
C9orf78-202ENST00000461349 RPGRIP1LQ68CZ1 1315 aa19.41■□□□□ 0.7
C9orf78-202ENST00000461349 NAIPQ13075 1403 aa19.41■□□□□ 0.7
C9orf78-202ENST00000461349 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
C9orf78-202ENST00000461349 HRCP23327 699 aa19.4■□□□□ 0.7
C9orf78-202ENST00000461349 VPS72Q15906 364 aa19.4■□□□□ 0.7
C9orf78-202ENST00000461349 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
C9orf78-202ENST00000461349 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
C9orf78-202ENST00000461349 A0A0G2JS52 829 aa19.38■□□□□ 0.69
C9orf78-202ENST00000461349 MYT1Q01538 1121 aa19.38■□□□□ 0.69
C9orf78-202ENST00000461349 ABCA3Q99758 1704 aa19.38■□□□□ 0.69
C9orf78-202ENST00000461349 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
C9orf78-202ENST00000461349 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
C9orf78-202ENST00000461349 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
C9orf78-202ENST00000461349 ONECUT3O60422 494 aaPredicted RBP19.35■□□□□ 0.69
C9orf78-202ENST00000461349 KRT28Q7Z3Y7 464 aa19.34■□□□□ 0.69
C9orf78-202ENST00000461349 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
C9orf78-202ENST00000461349 TECPR2O15040 1411 aa19.33■□□□□ 0.68
C9orf78-202ENST00000461349 PSME1Q06323 249 aa19.32■□□□□ 0.68
C9orf78-202ENST00000461349 STK26Q9P289 416 aa19.32■□□□□ 0.68
C9orf78-202ENST00000461349 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
C9orf78-202ENST00000461349 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
C9orf78-202ENST00000461349 NRAPQ86VF7 1730 aa19.31■□□□□ 0.68
C9orf78-202ENST00000461349 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
C9orf78-202ENST00000461349 TNS1Q9HBL0 1735 aaKnown RBP19.29■□□□□ 0.68
C9orf78-202ENST00000461349 EN1Q05925 392 aaPredicted RBP19.29■□□□□ 0.68
C9orf78-202ENST00000461349 R3HDM1Q15032 1099 aaKnown RBP19.29■□□□□ 0.68
C9orf78-202ENST00000461349 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
C9orf78-202ENST00000461349 ARHGEF10O15013 1369 aa19.28■□□□□ 0.68
C9orf78-202ENST00000461349 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
C9orf78-202ENST00000461349 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
C9orf78-202ENST00000461349 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
C9orf78-202ENST00000461349 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
C9orf78-202ENST00000461349 COL14A1Q05707 1796 aaKnown RBP19.26■□□□□ 0.67
C9orf78-202ENST00000461349 SBNO1A3KN83 1393 aa19.25■□□□□ 0.67
C9orf78-202ENST00000461349 PLEKHH1Q9ULM0 1364 aa19.25■□□□□ 0.67
C9orf78-202ENST00000461349 PHF8Q9UPP1 1060 aa19.25■□□□□ 0.67
C9orf78-202ENST00000461349 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
C9orf78-202ENST00000461349 YY1P25490 414 aa19.23■□□□□ 0.67
C9orf78-202ENST00000461349 DISP2A7MBM2 1401 aa19.23■□□□□ 0.67
C9orf78-202ENST00000461349 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
C9orf78-202ENST00000461349 NRXN1Q9ULB1 1477 aa19.22■□□□□ 0.67
C9orf78-202ENST00000461349 BTG4Q9NY30 223 aa19.22■□□□□ 0.67
C9orf78-202ENST00000461349 TMEM132EQ6IEE7 984 aa19.21■□□□□ 0.67
C9orf78-202ENST00000461349 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
C9orf78-202ENST00000461349 THSD7AQ9UPZ6 1657 aa19.2■□□□□ 0.66
C9orf78-202ENST00000461349 YTHDC2Q9H6S0 1430 aaKnown RBP19.2■□□□□ 0.66
C9orf78-202ENST00000461349 FAM182BQ5T319 152 aa19.2■□□□□ 0.66
C9orf78-202ENST00000461349 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
C9orf78-202ENST00000461349 TRPM3Q9HCF6 1732 aaPredicted RBP19.18■□□□□ 0.66
C9orf78-202ENST00000461349 EZH2Q15910 746 aaKnown RBP19.18■□□□□ 0.66
C9orf78-202ENST00000461349 ALS2Q96Q42 1657 aa19.17■□□□□ 0.66
C9orf78-202ENST00000461349 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
C9orf78-202ENST00000461349 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
C9orf78-202ENST00000461349 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
C9orf78-202ENST00000461349 RREB1Q92766 1687 aa19.16■□□□□ 0.66
C9orf78-202ENST00000461349 SIRT1Q96EB6 747 aa19.15■□□□□ 0.66
C9orf78-202ENST00000461349 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
C9orf78-202ENST00000461349 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
C9orf78-202ENST00000461349 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
C9orf78-202ENST00000461349 NUP188Q5SRE5 1749 aa19.14■□□□□ 0.65
C9orf78-202ENST00000461349 CRYBG1Q9Y4K1 1723 aa19.14■□□□□ 0.65
C9orf78-202ENST00000461349 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
C9orf78-202ENST00000461349 SPATA31E1Q6ZUB1 1445 aa19.12■□□□□ 0.65
C9orf78-202ENST00000461349 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms