RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 YTHDC2Q9H6S0 1430 aaKnown RBP14.3□□□□□ -0.12
CD40-203ENST00000461171 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
CD40-203ENST00000461171 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
CD40-203ENST00000461171 C14orf93Q9H972 538 aaKnown RBP14.28□□□□□ -0.12
CD40-203ENST00000461171 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
CD40-203ENST00000461171 SOS2Q07890 1332 aaPredicted RBP14.27□□□□□ -0.12
CD40-203ENST00000461171 TMEM132EQ6IEE7 984 aa14.27□□□□□ -0.13
CD40-203ENST00000461171 ADGRB1O14514 1584 aa14.26□□□□□ -0.13
CD40-203ENST00000461171 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
CD40-203ENST00000461171 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
CD40-203ENST00000461171 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
CD40-203ENST00000461171 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
CD40-203ENST00000461171 WAPLQ7Z5K2 1190 aa14.25□□□□□ -0.13
CD40-203ENST00000461171 STK26Q9P289 416 aa14.25□□□□□ -0.13
CD40-203ENST00000461171 CFAP70Q5T0N1 1121 aa14.24□□□□□ -0.13
CD40-203ENST00000461171 SIRT1Q96EB6 747 aa14.24□□□□□ -0.13
CD40-203ENST00000461171 DLC1Q96QB1 1528 aa14.24□□□□□ -0.13
CD40-203ENST00000461171 PXDNQ92626 1479 aa14.24□□□□□ -0.13
CD40-203ENST00000461171 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
CD40-203ENST00000461171 MEX3CQ5U5Q3 659 aaKnown RBP14.22□□□□□ -0.13
CD40-203ENST00000461171 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
CD40-203ENST00000461171 ZNF772Q68DY9 489 aaPredicted RBP14.21□□□□□ -0.13
CD40-203ENST00000461171 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
CD40-203ENST00000461171 NPHP3Q7Z494 1330 aa14.2□□□□□ -0.14
CD40-203ENST00000461171 NUTM2BA6NNL0 878 aaPredicted RBP14.2□□□□□ -0.14
CD40-203ENST00000461171 NUTM2EB1AL46 878 aaPredicted RBP14.2□□□□□ -0.14
CD40-203ENST00000461171 NUTM2AQ8IVF1 878 aaPredicted RBP14.2□□□□□ -0.14
CD40-203ENST00000461171 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
CD40-203ENST00000461171 ESCO1Q5FWF5 840 aa14.19□□□□□ -0.14
CD40-203ENST00000461171 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
CD40-203ENST00000461171 STAC3Q96MF2 364 aa14.18□□□□□ -0.14
CD40-203ENST00000461171 AFF2P51816 1311 aa14.17□□□□□ -0.14
CD40-203ENST00000461171 PRAM1Q96QH2 718 aa14.17□□□□□ -0.14
CD40-203ENST00000461171 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
CD40-203ENST00000461171 NUTM2FA1L443 756 aa14.16□□□□□ -0.14
CD40-203ENST00000461171 FOXO3O43524 673 aa14.16□□□□□ -0.14
CD40-203ENST00000461171 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
CD40-203ENST00000461171 DCAF11Q8TEB1 546 aa14.15□□□□□ -0.14
CD40-203ENST00000461171 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
CD40-203ENST00000461171 C8orf37Q96NL8 207 aa14.14□□□□□ -0.15
CD40-203ENST00000461171 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
CD40-203ENST00000461171 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
CD40-203ENST00000461171 XPCQ01831 940 aaPredicted RBP14.13□□□□□ -0.15
CD40-203ENST00000461171 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
CD40-203ENST00000461171 SAFB2Q14151 953 aaKnown RBP eCLIP14.12□□□□□ -0.15
CD40-203ENST00000461171 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
CD40-203ENST00000461171 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
CD40-203ENST00000461171 SPATA31A3Q5VYP0 1347 aa14.12□□□□□ -0.15
CD40-203ENST00000461171 RXRBP28702 533 aa14.11□□□□□ -0.15
CD40-203ENST00000461171 POGKQ9P215 609 aa14.11□□□□□ -0.15
CD40-203ENST00000461171 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
CD40-203ENST00000461171 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
CD40-203ENST00000461171 RGS12O14924 1447 aa14.1□□□□□ -0.15
CD40-203ENST00000461171 TNS3Q68CZ2 1445 aa14.1□□□□□ -0.15
CD40-203ENST00000461171 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
CD40-203ENST00000461171 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
CD40-203ENST00000461171 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
CD40-203ENST00000461171 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
CD40-203ENST00000461171 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
CD40-203ENST00000461171 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
CD40-203ENST00000461171 ATRNO75882 1429 aa14.08□□□□□ -0.15
CD40-203ENST00000461171 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
CD40-203ENST00000461171 SBNO1A3KN83 1393 aa14.08□□□□□ -0.16
CD40-203ENST00000461171 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
CD40-203ENST00000461171 TRPM3Q9HCF6 1732 aaPredicted RBP14.07□□□□□ -0.16
CD40-203ENST00000461171 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
CD40-203ENST00000461171 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
CD40-203ENST00000461171 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
CD40-203ENST00000461171 MINK1Q8N4C8 1332 aaPredicted RBP14.07□□□□□ -0.16
CD40-203ENST00000461171 ATP7BP35670 1465 aa14.06□□□□□ -0.16
CD40-203ENST00000461171 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
CD40-203ENST00000461171 USP21Q9UK80 565 aa14.06□□□□□ -0.16
CD40-203ENST00000461171 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.06□□□□□ -0.16
CD40-203ENST00000461171 SLIT2O94813 1529 aa14.05□□□□□ -0.16
CD40-203ENST00000461171 WASLO00401 505 aaPredicted RBP14.05□□□□□ -0.16
CD40-203ENST00000461171 UPF1Q92900 1129 aaKnown RBP eCLIP14.04□□□□□ -0.16
CD40-203ENST00000461171 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
CD40-203ENST00000461171 ARHGEF10O15013 1369 aa14.04□□□□□ -0.16
CD40-203ENST00000461171 ALS2Q96Q42 1657 aa14.04□□□□□ -0.16
CD40-203ENST00000461171 PSME1Q06323 249 aa14.03□□□□□ -0.16
CD40-203ENST00000461171 TOPAZ1Q8N9V7 1692 aa14.03□□□□□ -0.16
CD40-203ENST00000461171 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
CD40-203ENST00000461171 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
CD40-203ENST00000461171 NBPF1Q3BBV0 1214 aa14.01□□□□□ -0.17
CD40-203ENST00000461171 CRYBG1Q9Y4K1 1723 aa14.01□□□□□ -0.17
CD40-203ENST00000461171 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
CD40-203ENST00000461171 GLI3P10071 1580 aa14□□□□□ -0.17
CD40-203ENST00000461171 GPRASP1Q5JY77 1395 aa13.99□□□□□ -0.17
CD40-203ENST00000461171 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
CD40-203ENST00000461171 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
CD40-203ENST00000461171 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
CD40-203ENST00000461171 TRPM1Q7Z4N2 1603 aa13.98□□□□□ -0.17
CD40-203ENST00000461171 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
CD40-203ENST00000461171 RALGAPBQ86X10 1494 aa13.98□□□□□ -0.17
CD40-203ENST00000461171 POLR3AO14802 1390 aaPredicted RBP13.97□□□□□ -0.17
CD40-203ENST00000461171 NUDT16Q96DE0 195 aaKnown RBP13.97□□□□□ -0.17
CD40-203ENST00000461171 NRAPQ86VF7 1730 aa13.96□□□□□ -0.17
CD40-203ENST00000461171 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
CD40-203ENST00000461171 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
CD40-203ENST00000461171 GJD4Q96KN9 370 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms