RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ADAMTS2O95450 1211 aa27.29■■□□□ 1.96
COL9A2-205ENST00000461118 HRCP23327 699 aa27.29■■□□□ 1.96
COL9A2-205ENST00000461118 CDC42BPGQ6DT37 1551 aa27.28■■□□□ 1.96
COL9A2-205ENST00000461118 RPGRIP1LQ68CZ1 1315 aa27.28■■□□□ 1.96
COL9A2-205ENST00000461118 NGLY1Q96IV0 654 aa27.27■■□□□ 1.96
COL9A2-205ENST00000461118 IFT172Q9UG01 1749 aa27.26■■□□□ 1.95
COL9A2-205ENST00000461118 PXDNQ92626 1479 aa27.24■■□□□ 1.95
COL9A2-205ENST00000461118 MYOM2P54296 1465 aa27.23■■□□□ 1.95
COL9A2-205ENST00000461118 FNBP4Q8N3X1 1017 aaPredicted RBP27.22■■□□□ 1.95
COL9A2-205ENST00000461118 CCDC144AA2RUR9 1427 aa27.21■■□□□ 1.95
COL9A2-205ENST00000461118 ATRNO75882 1429 aa27.21■■□□□ 1.95
COL9A2-205ENST00000461118 USP21Q9UK80 565 aa27.2■■□□□ 1.94
COL9A2-205ENST00000461118 KNDC1Q76NI1 1749 aa27.19■■□□□ 1.94
COL9A2-205ENST00000461118 EP400Q96L91 3159 aa27.18■■□□□ 1.94
COL9A2-205ENST00000461118 TECPR2O15040 1411 aa27.17■■□□□ 1.94
COL9A2-205ENST00000461118 TRPC5Q9UL62 973 aaPredicted RBP27.17■■□□□ 1.94
COL9A2-205ENST00000461118 BCL9LQ86UU0 1499 aa27.17■■□□□ 1.94
COL9A2-205ENST00000461118 ADGRF5Q8IZF2 1346 aa27.16■■□□□ 1.94
COL9A2-205ENST00000461118 SPATA31E1Q6ZUB1 1445 aa27.15■■□□□ 1.94
COL9A2-205ENST00000461118 ATAD2Q6PL18 1390 aa27.14■■□□□ 1.94
COL9A2-205ENST00000461118 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.14■■□□□ 1.94
COL9A2-205ENST00000461118 FMN2Q9NZ56 1722 aa27.14■■□□□ 1.94
COL9A2-205ENST00000461118 NPHP3Q7Z494 1330 aa27.14■■□□□ 1.93
COL9A2-205ENST00000461118 ESCO1Q5FWF5 840 aa27.13■■□□□ 1.93
COL9A2-205ENST00000461118 SRCAPQ6ZRS2 3230 aa27.12■■□□□ 1.93
COL9A2-205ENST00000461118 RGPD8O14715 1765 aaPredicted RBP27.11■■□□□ 1.93
COL9A2-205ENST00000461118 FOXO3O43524 673 aa27.09■■□□□ 1.93
COL9A2-205ENST00000461118 WAPLQ7Z5K2 1190 aa27.09■■□□□ 1.93
COL9A2-205ENST00000461118 LRPPRCP42704 1394 aaKnown RBP27.09■■□□□ 1.93
COL9A2-205ENST00000461118 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
COL9A2-205ENST00000461118 XPCQ01831 940 aaPredicted RBP27.08■■□□□ 1.93
COL9A2-205ENST00000461118 KIF1AQ12756 1690 aa27.07■■□□□ 1.92
COL9A2-205ENST00000461118 ABCC11Q96J66 1382 aa27.07■■□□□ 1.92
COL9A2-205ENST00000461118 ANKRD30BQ9BXX2 1392 aa27.07■■□□□ 1.92
COL9A2-205ENST00000461118 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
COL9A2-205ENST00000461118 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
COL9A2-205ENST00000461118 GLI3P10071 1580 aa27.05■■□□□ 1.92
COL9A2-205ENST00000461118 BRWD3Q6RI45 1802 aa27.04■■□□□ 1.92
COL9A2-205ENST00000461118 STK26Q9P289 416 aa27.04■■□□□ 1.92
COL9A2-205ENST00000461118 NUTM2FA1L443 756 aa27.03■■□□□ 1.92
COL9A2-205ENST00000461118 TMEM132EQ6IEE7 984 aa27.03■■□□□ 1.92
COL9A2-205ENST00000461118 SLIT2O94813 1529 aa27.02■■□□□ 1.92
COL9A2-205ENST00000461118 USP32Q8NFA0 1604 aa27.01■■□□□ 1.92
COL9A2-205ENST00000461118 GJD4Q96KN9 370 aaPredicted RBP27.01■■□□□ 1.91
COL9A2-205ENST00000461118 YTHDC2Q9H6S0 1430 aaKnown RBP26.99■■□□□ 1.91
COL9A2-205ENST00000461118 SPATA31A3Q5VYP0 1347 aa26.99■■□□□ 1.91
COL9A2-205ENST00000461118 ABCA3Q99758 1704 aa26.99■■□□□ 1.91
COL9A2-205ENST00000461118 RALGAPBQ86X10 1494 aa26.97■■□□□ 1.91
COL9A2-205ENST00000461118 PLCH1Q4KWH8 1693 aa26.95■■□□□ 1.91
COL9A2-205ENST00000461118 NRXN1Q9ULB1 1477 aa26.95■■□□□ 1.91
COL9A2-205ENST00000461118 NWD2Q9ULI1 1742 aa26.93■■□□□ 1.9
COL9A2-205ENST00000461118 CCDC125Q86Z20 511 aa26.93■■□□□ 1.9
COL9A2-205ENST00000461118 UNC5CLQ8IV45 518 aa26.93■■□□□ 1.9
COL9A2-205ENST00000461118 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
COL9A2-205ENST00000461118 KRT28Q7Z3Y7 464 aa26.91■■□□□ 1.9
COL9A2-205ENST00000461118 C14orf93Q9H972 538 aaKnown RBP26.9■■□□□ 1.9
COL9A2-205ENST00000461118 TNS3Q68CZ2 1445 aa26.9■■□□□ 1.9
COL9A2-205ENST00000461118 ZRANB1Q9UGI0 708 aa26.89■■□□□ 1.9
COL9A2-205ENST00000461118 TRPM3Q9HCF6 1732 aaPredicted RBP26.85■■□□□ 1.89
COL9A2-205ENST00000461118 BLMP54132 1417 aaPredicted RBP26.85■■□□□ 1.89
COL9A2-205ENST00000461118 STAC3Q96MF2 364 aa26.85■■□□□ 1.89
COL9A2-205ENST00000461118 PHF8Q9UPP1 1060 aa26.85■■□□□ 1.89
COL9A2-205ENST00000461118 CFAP70Q5T0N1 1121 aa26.84■■□□□ 1.89
COL9A2-205ENST00000461118 CABLES1Q8TDN4 633 aa26.84■■□□□ 1.89
COL9A2-205ENST00000461118 NRAPQ86VF7 1730 aa26.83■■□□□ 1.89
COL9A2-205ENST00000461118 DLC1Q96QB1 1528 aa26.83■■□□□ 1.89
COL9A2-205ENST00000461118 ADGRB2O60241 1585 aa26.83■■□□□ 1.89
COL9A2-205ENST00000461118 SBNO1A3KN83 1393 aa26.83■■□□□ 1.88
COL9A2-205ENST00000461118 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
COL9A2-205ENST00000461118 DHX57Q6P158 1386 aaKnown RBP26.81■■□□□ 1.88
COL9A2-205ENST00000461118 ADGRB1O14514 1584 aa26.8■■□□□ 1.88
COL9A2-205ENST00000461118 ALS2Q96Q42 1657 aa26.8■■□□□ 1.88
COL9A2-205ENST00000461118 ONECUT3O60422 494 aaPredicted RBP26.8■■□□□ 1.88
COL9A2-205ENST00000461118 VPS72Q15906 364 aa26.8■■□□□ 1.88
COL9A2-205ENST00000461118 DCAF11Q8TEB1 546 aa26.79■■□□□ 1.88
COL9A2-205ENST00000461118 PSME1Q06323 249 aa26.78■■□□□ 1.88
COL9A2-205ENST00000461118 SEPT12Q8IYM1 358 aa26.78■■□□□ 1.88
COL9A2-205ENST00000461118 PRAM1Q96QH2 718 aa26.78■■□□□ 1.88
COL9A2-205ENST00000461118 CRYBG1Q9Y4K1 1723 aa26.78■■□□□ 1.88
COL9A2-205ENST00000461118 DEFB132Q7Z7B7 95 aa26.77■■□□□ 1.88
COL9A2-205ENST00000461118 ANKARQ7Z5J8 1434 aa26.76■■□□□ 1.87
COL9A2-205ENST00000461118 ARHGEF10O15013 1369 aa26.75■■□□□ 1.87
COL9A2-205ENST00000461118 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
COL9A2-205ENST00000461118 FAM83GA6ND36 823 aa26.74■■□□□ 1.87
COL9A2-205ENST00000461118 KDM2AQ9Y2K7 1162 aa26.74■■□□□ 1.87
COL9A2-205ENST00000461118 PLEKHG5O94827 1062 aa26.72■■□□□ 1.87
COL9A2-205ENST00000461118 COL14A1Q05707 1796 aaKnown RBP26.71■■□□□ 1.87
COL9A2-205ENST00000461118 HAP1P54257 671 aaPredicted RBP26.71■■□□□ 1.87
COL9A2-205ENST00000461118 PMFBP1Q8TBY8 1022 aa26.71■■□□□ 1.87
COL9A2-205ENST00000461118 LRP5O75197 1615 aa26.7■■□□□ 1.86
COL9A2-205ENST00000461118 PRR36Q9H6K5 1346 aa26.68■■□□□ 1.86
COL9A2-205ENST00000461118 LMOD2Q6P5Q4 547 aa26.68■■□□□ 1.86
COL9A2-205ENST00000461118 KRT27Q7Z3Y8 459 aa26.68■■□□□ 1.86
COL9A2-205ENST00000461118 TULP4Q9NRJ4 1543 aa26.67■■□□□ 1.86
COL9A2-205ENST00000461118 POGKQ9P215 609 aa26.66■■□□□ 1.86
COL9A2-205ENST00000461118 CCDC9Q9Y3X0 531 aaKnown RBP26.65■■□□□ 1.86
COL9A2-205ENST00000461118 THSD7AQ9UPZ6 1657 aa26.64■■□□□ 1.86
COL9A2-205ENST00000461118 HIRIP3Q9BW71 556 aaPredicted RBP26.64■■□□□ 1.86
COL9A2-205ENST00000461118 ARHGEF28Q8N1W1 1705 aaKnown RBP26.64■■□□□ 1.85
COL9A2-205ENST00000461118 RGPD1P0DJD0 1748 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms