RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 USP21Q9UK80 565 aa32.88■■■□□ 2.85
HMG20B-207ENST00000461099 NPHP3Q7Z494 1330 aa32.86■■■□□ 2.85
HMG20B-207ENST00000461099 FNBP4Q8N3X1 1017 aaPredicted RBP32.86■■■□□ 2.85
HMG20B-207ENST00000461099 CCDC144AA2RUR9 1427 aa32.85■■■□□ 2.85
HMG20B-207ENST00000461099 CDC42BPGQ6DT37 1551 aa32.85■■■□□ 2.85
HMG20B-207ENST00000461099 RGL3Q3MIN7 710 aa32.85■■■□□ 2.85
HMG20B-207ENST00000461099 COL22A1Q8NFW1 1626 aaPredicted RBP32.84■■■□□ 2.85
HMG20B-207ENST00000461099 STK26Q9P289 416 aa32.83■■■□□ 2.85
HMG20B-207ENST00000461099 TRPC5Q9UL62 973 aaPredicted RBP32.83■■■□□ 2.85
HMG20B-207ENST00000461099 SPATA31E1Q6ZUB1 1445 aa32.81■■■□□ 2.84
HMG20B-207ENST00000461099 WAPLQ7Z5K2 1190 aa32.81■■■□□ 2.84
HMG20B-207ENST00000461099 ANKRD30BQ9BXX2 1392 aa32.81■■■□□ 2.84
HMG20B-207ENST00000461099 FOXO3O43524 673 aa32.8■■■□□ 2.84
HMG20B-207ENST00000461099 TECPR2O15040 1411 aa32.79■■■□□ 2.84
HMG20B-207ENST00000461099 MPHOSPH9Q99550 1183 aa32.79■■■□□ 2.84
HMG20B-207ENST00000461099 LRPPRCP42704 1394 aaKnown RBP32.79■■■□□ 2.84
HMG20B-207ENST00000461099 PXDNQ92626 1479 aa32.79■■■□□ 2.84
HMG20B-207ENST00000461099 MYOM2P54296 1465 aa32.78■■■□□ 2.84
HMG20B-207ENST00000461099 ABCC11Q96J66 1382 aa32.77■■■□□ 2.84
HMG20B-207ENST00000461099 XPCQ01831 940 aaPredicted RBP32.76■■■□□ 2.83
HMG20B-207ENST00000461099 TMEM132EQ6IEE7 984 aa32.76■■■□□ 2.83
HMG20B-207ENST00000461099 ATAD2Q6PL18 1390 aa32.75■■■□□ 2.83
HMG20B-207ENST00000461099 NUTM2FA1L443 756 aa32.75■■■□□ 2.83
HMG20B-207ENST00000461099 ATRNO75882 1429 aa32.75■■■□□ 2.83
HMG20B-207ENST00000461099 IFT172Q9UG01 1749 aa32.74■■■□□ 2.83
HMG20B-207ENST00000461099 PLEKHH1Q9ULM0 1364 aa32.7■■■□□ 2.83
HMG20B-207ENST00000461099 PIK3C2GO75747 1445 aa32.7■■■□□ 2.83
HMG20B-207ENST00000461099 BCL9LQ86UU0 1499 aa32.7■■■□□ 2.83
HMG20B-207ENST00000461099 KNDC1Q76NI1 1749 aa32.68■■■□□ 2.82
HMG20B-207ENST00000461099 MARF1Q9Y4F3 1742 aaKnown RBP32.67■■■□□ 2.82
HMG20B-207ENST00000461099 YTHDC2Q9H6S0 1430 aaKnown RBP32.67■■■□□ 2.82
HMG20B-207ENST00000461099 SIRT1Q96EB6 747 aa32.64■■■□□ 2.82
HMG20B-207ENST00000461099 FMN2Q9NZ56 1722 aa32.63■■■□□ 2.81
HMG20B-207ENST00000461099 EP400Q96L91 3159 aa32.62■■■□□ 2.81
HMG20B-207ENST00000461099 SPATA31A3Q5VYP0 1347 aa32.62■■■□□ 2.81
HMG20B-207ENST00000461099 GJD4Q96KN9 370 aaPredicted RBP32.62■■■□□ 2.81
HMG20B-207ENST00000461099 C14orf93Q9H972 538 aaKnown RBP32.62■■■□□ 2.81
HMG20B-207ENST00000461099 SRCAPQ6ZRS2 3230 aa32.61■■■□□ 2.81
HMG20B-207ENST00000461099 ACIN1Q9UKV3 1341 aaKnown RBP32.59■■■□□ 2.81
HMG20B-207ENST00000461099 KRT28Q7Z3Y7 464 aa32.59■■■□□ 2.81
HMG20B-207ENST00000461099 KIF1AQ12756 1690 aa32.59■■■□□ 2.81
HMG20B-207ENST00000461099 UNC5CLQ8IV45 518 aa32.56■■■□□ 2.8
HMG20B-207ENST00000461099 CCDC125Q86Z20 511 aa32.55■■■□□ 2.8
HMG20B-207ENST00000461099 DHX57Q6P158 1386 aaKnown RBP32.55■■■□□ 2.8
HMG20B-207ENST00000461099 CFAP70Q5T0N1 1121 aa32.54■■■□□ 2.8
HMG20B-207ENST00000461099 PHF8Q9UPP1 1060 aa32.54■■■□□ 2.8
HMG20B-207ENST00000461099 SLIT2O94813 1529 aa32.53■■■□□ 2.8
HMG20B-207ENST00000461099 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.53■■■□□ 2.8
HMG20B-207ENST00000461099 NRXN1Q9ULB1 1477 aa32.53■■■□□ 2.8
HMG20B-207ENST00000461099 PSME1Q06323 249 aa32.51■■■□□ 2.79
HMG20B-207ENST00000461099 RGPD8O14715 1765 aaPredicted RBP32.5■■■□□ 2.79
HMG20B-207ENST00000461099 PRAM1Q96QH2 718 aa32.49■■■□□ 2.79
HMG20B-207ENST00000461099 ZRANB1Q9UGI0 708 aa32.49■■■□□ 2.79
HMG20B-207ENST00000461099 RALGAPBQ86X10 1494 aa32.48■■■□□ 2.79
HMG20B-207ENST00000461099 USP32Q8NFA0 1604 aa32.48■■■□□ 2.79
HMG20B-207ENST00000461099 HAP1P54257 671 aaPredicted RBP32.47■■■□□ 2.79
HMG20B-207ENST00000461099 SAFB2Q14151 953 aaKnown RBP eCLIP32.47■■■□□ 2.79
HMG20B-207ENST00000461099 TNS3Q68CZ2 1445 aa32.47■■■□□ 2.79
HMG20B-207ENST00000461099 GLI3P10071 1580 aa32.45■■■□□ 2.79
HMG20B-207ENST00000461099 CABLES1Q8TDN4 633 aa32.45■■■□□ 2.79
HMG20B-207ENST00000461099 SBNO1A3KN83 1393 aa32.44■■■□□ 2.78
HMG20B-207ENST00000461099 POGKQ9P215 609 aa32.43■■■□□ 2.78
HMG20B-207ENST00000461099 LMOD2Q6P5Q4 547 aa32.41■■■□□ 2.78
HMG20B-207ENST00000461099 PLEKHG5O94827 1062 aa32.4■■■□□ 2.78
HMG20B-207ENST00000461099 VPS72Q15906 364 aa32.39■■■□□ 2.78
HMG20B-207ENST00000461099 ARHGEF10O15013 1369 aa32.39■■■□□ 2.78
HMG20B-207ENST00000461099 DLC1Q96QB1 1528 aa32.39■■■□□ 2.78
HMG20B-207ENST00000461099 ANKARQ7Z5J8 1434 aa32.37■■■□□ 2.77
HMG20B-207ENST00000461099 PMFBP1Q8TBY8 1022 aa32.37■■■□□ 2.77
HMG20B-207ENST00000461099 BLMP54132 1417 aaPredicted RBP32.36■■■□□ 2.77
HMG20B-207ENST00000461099 SEPT12Q8IYM1 358 aa32.36■■■□□ 2.77
HMG20B-207ENST00000461099 BRWD3Q6RI45 1802 aa32.35■■■□□ 2.77
HMG20B-207ENST00000461099 RAB3GAP2Q9H2M9 1393 aa32.34■■■□□ 2.77
HMG20B-207ENST00000461099 NWD2Q9ULI1 1742 aa32.34■■■□□ 2.77
HMG20B-207ENST00000461099 ONECUT3O60422 494 aaPredicted RBP32.33■■■□□ 2.77
HMG20B-207ENST00000461099 TRAK1Q9UPV9 953 aa32.33■■■□□ 2.77
HMG20B-207ENST00000461099 CCDC9Q9Y3X0 531 aaKnown RBP32.33■■■□□ 2.77
HMG20B-207ENST00000461099 PLCH1Q4KWH8 1693 aa32.32■■■□□ 2.76
HMG20B-207ENST00000461099 FAM83GA6ND36 823 aa32.32■■■□□ 2.76
HMG20B-207ENST00000461099 ADGRB1O14514 1584 aa32.32■■■□□ 2.76
HMG20B-207ENST00000461099 ADGRB2O60241 1585 aa32.32■■■□□ 2.76
HMG20B-207ENST00000461099 ABCA3Q99758 1704 aa32.31■■■□□ 2.76
HMG20B-207ENST00000461099 HIRIP3Q9BW71 556 aaPredicted RBP32.3■■■□□ 2.76
HMG20B-207ENST00000461099 KDM2AQ9Y2K7 1162 aa32.27■■■□□ 2.76
HMG20B-207ENST00000461099 MINK1Q8N4C8 1332 aaPredicted RBP32.26■■■□□ 2.76
HMG20B-207ENST00000461099 SF3B2Q13435 895 aaKnown RBP32.26■■■□□ 2.75
HMG20B-207ENST00000461099 EIF3AQ14152 1382 aaKnown RBP32.25■■■□□ 2.75
HMG20B-207ENST00000461099 GPRASP1Q5JY77 1395 aa32.25■■■□□ 2.75
HMG20B-207ENST00000461099 KRT27Q7Z3Y8 459 aa32.25■■■□□ 2.75
HMG20B-207ENST00000461099 DEFB132Q7Z7B7 95 aa32.25■■■□□ 2.75
HMG20B-207ENST00000461099 DCAF11Q8TEB1 546 aa32.25■■■□□ 2.75
HMG20B-207ENST00000461099 TRPM3Q9HCF6 1732 aaPredicted RBP32.24■■■□□ 2.75
HMG20B-207ENST00000461099 PRR36Q9H6K5 1346 aa32.24■■■□□ 2.75
HMG20B-207ENST00000461099 WASLO00401 505 aaPredicted RBP32.22■■■□□ 2.75
HMG20B-207ENST00000461099 STAC3Q96MF2 364 aa32.22■■■□□ 2.75
HMG20B-207ENST00000461099 BTG4Q9NY30 223 aa32.21■■■□□ 2.75
HMG20B-207ENST00000461099 TULP4Q9NRJ4 1543 aa32.21■■■□□ 2.75
HMG20B-207ENST00000461099 ALS2Q96Q42 1657 aa32.2■■■□□ 2.74
HMG20B-207ENST00000461099 A0A0G2JS52 829 aa32.17■■■□□ 2.74
HMG20B-207ENST00000461099 MYT1Q01538 1121 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms