RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 PRAM1Q96QH2 718 aa28.83■■■□□ 2.21
SNAPC3-204ENST00000461041 NBPF1Q3BBV0 1214 aa28.82■■■□□ 2.2
SNAPC3-204ENST00000461041 CDC42BPGQ6DT37 1551 aa28.82■■■□□ 2.2
SNAPC3-204ENST00000461041 POGKQ9P215 609 aa28.8■■■□□ 2.2
SNAPC3-204ENST00000461041 TRPM1Q7Z4N2 1603 aa28.79■■■□□ 2.2
SNAPC3-204ENST00000461041 CLSPNQ9HAW4 1339 aa28.78■■■□□ 2.2
SNAPC3-204ENST00000461041 SAFB2Q14151 953 aaKnown RBP eCLIP28.78■■■□□ 2.2
SNAPC3-204ENST00000461041 ARHGEF28Q8N1W1 1705 aaKnown RBP28.77■■■□□ 2.2
SNAPC3-204ENST00000461041 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
SNAPC3-204ENST00000461041 C1orf167Q5SNV9 1468 aa28.76■■■□□ 2.19
SNAPC3-204ENST00000461041 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
SNAPC3-204ENST00000461041 PHLPP1O60346 1717 aa28.72■■■□□ 2.19
SNAPC3-204ENST00000461041 CCER1Q8TC90 406 aaPredicted RBP28.71■■■□□ 2.19
SNAPC3-204ENST00000461041 FMN2Q9NZ56 1722 aa28.71■■■□□ 2.19
SNAPC3-204ENST00000461041 AHDC1Q5TGY3 1603 aaPredicted RBP28.7■■■□□ 2.19
SNAPC3-204ENST00000461041 ROCK2O75116 1388 aaKnown RBP28.69■■■□□ 2.18
SNAPC3-204ENST00000461041 ADGRB2O60241 1585 aa28.69■■■□□ 2.18
SNAPC3-204ENST00000461041 ORAI2Q96SN7 254 aa28.68■■■□□ 2.18
SNAPC3-204ENST00000461041 MINK1Q8N4C8 1332 aaPredicted RBP28.68■■■□□ 2.18
SNAPC3-204ENST00000461041 NUTM2FA1L443 756 aa28.67■■■□□ 2.18
SNAPC3-204ENST00000461041 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
SNAPC3-204ENST00000461041 HIRIP3Q9BW71 556 aaPredicted RBP28.66■■■□□ 2.18
SNAPC3-204ENST00000461041 NHSL1Q5SYE7 1610 aa28.65■■■□□ 2.18
SNAPC3-204ENST00000461041 GPRASP1Q5JY77 1395 aa28.62■■■□□ 2.17
SNAPC3-204ENST00000461041 RALGAPBQ86X10 1494 aa28.62■■■□□ 2.17
SNAPC3-204ENST00000461041 ESCO1Q5FWF5 840 aa28.62■■■□□ 2.17
SNAPC3-204ENST00000461041 DDX17Q92841 729 aaKnown RBP28.61■■■□□ 2.17
SNAPC3-204ENST00000461041 TIMELESSQ9UNS1 1208 aa28.6■■■□□ 2.17
SNAPC3-204ENST00000461041 WASLO00401 505 aaPredicted RBP28.59■■■□□ 2.17
SNAPC3-204ENST00000461041 CENPJQ9HC77 1338 aaPredicted RBP28.59■■■□□ 2.17
SNAPC3-204ENST00000461041 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
SNAPC3-204ENST00000461041 ANKARQ7Z5J8 1434 aa28.57■■■□□ 2.16
SNAPC3-204ENST00000461041 USP32Q8NFA0 1604 aa28.57■■■□□ 2.16
SNAPC3-204ENST00000461041 QRICH2Q9H0J4 1663 aa28.55■■■□□ 2.16
SNAPC3-204ENST00000461041 EIF3AQ14152 1382 aaKnown RBP28.55■■■□□ 2.16
SNAPC3-204ENST00000461041 JCADQ9P266 1359 aa28.55■■■□□ 2.16
SNAPC3-204ENST00000461041 CARD11Q9BXL7 1154 aa28.55■■■□□ 2.16
SNAPC3-204ENST00000461041 TULP4Q9NRJ4 1543 aa28.54■■■□□ 2.16
SNAPC3-204ENST00000461041 KIF1AQ12756 1690 aa28.54■■■□□ 2.16
SNAPC3-204ENST00000461041 SOS2Q07890 1332 aaPredicted RBP28.51■■■□□ 2.15
SNAPC3-204ENST00000461041 NPHP3Q7Z494 1330 aa28.51■■■□□ 2.15
SNAPC3-204ENST00000461041 PRR36Q9H6K5 1346 aa28.51■■■□□ 2.15
SNAPC3-204ENST00000461041 MED1Q15648 1581 aaPredicted RBP28.51■■■□□ 2.15
SNAPC3-204ENST00000461041 FOXO3O43524 673 aa28.51■■■□□ 2.15
SNAPC3-204ENST00000461041 LRRC59Q96AG4 307 aaKnown RBP28.5■■■□□ 2.15
SNAPC3-204ENST00000461041 CDK19Q9BWU1 502 aa28.5■■■□□ 2.15
SNAPC3-204ENST00000461041 PHF8Q9UPP1 1060 aa28.5■■■□□ 2.15
SNAPC3-204ENST00000461041 SHPRHQ149N8 1683 aa28.48■■■□□ 2.15
SNAPC3-204ENST00000461041 PXDNQ92626 1479 aa28.47■■■□□ 2.15
SNAPC3-204ENST00000461041 ATP7BP35670 1465 aa28.46■■■□□ 2.15
SNAPC3-204ENST00000461041 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
SNAPC3-204ENST00000461041 NUDT16Q96DE0 195 aaKnown RBP28.45■■■□□ 2.14
SNAPC3-204ENST00000461041 PMFBP1Q8TBY8 1022 aa28.44■■■□□ 2.14
SNAPC3-204ENST00000461041 DISP3Q9P2K9 1392 aa28.43■■■□□ 2.14
SNAPC3-204ENST00000461041 ITSN1Q15811 1721 aa28.43■■■□□ 2.14
SNAPC3-204ENST00000461041 PNPLA6Q8IY17 1366 aa28.42■■■□□ 2.14
SNAPC3-204ENST00000461041 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
SNAPC3-204ENST00000461041 SRPK2P78362 688 aaKnown RBP28.41■■■□□ 2.14
SNAPC3-204ENST00000461041 KRT28Q7Z3Y7 464 aa28.4■■■□□ 2.14
SNAPC3-204ENST00000461041 TOPAZ1Q8N9V7 1692 aa28.39■■■□□ 2.14
SNAPC3-204ENST00000461041 CABP2Q9NPB3 220 aa28.39■■■□□ 2.14
SNAPC3-204ENST00000461041 EVC2Q86UK5 1308 aa28.39■■■□□ 2.13
SNAPC3-204ENST00000461041 SBNO2Q9Y2G9 1366 aa28.38■■■□□ 2.13
SNAPC3-204ENST00000461041 CCDC61Q9Y6R9 512 aa28.37■■■□□ 2.13
SNAPC3-204ENST00000461041 PSME1Q06323 249 aa28.36■■■□□ 2.13
SNAPC3-204ENST00000461041 LRP6O75581 1613 aa28.36■■■□□ 2.13
SNAPC3-204ENST00000461041 NGDNQ8NEJ9 315 aaKnown RBP28.35■■■□□ 2.13
SNAPC3-204ENST00000461041 NUTM2BA6NNL0 878 aaPredicted RBP28.33■■■□□ 2.13
SNAPC3-204ENST00000461041 NUTM2EB1AL46 878 aaPredicted RBP28.33■■■□□ 2.13
SNAPC3-204ENST00000461041 NUTM2AQ8IVF1 878 aaPredicted RBP28.33■■■□□ 2.13
SNAPC3-204ENST00000461041 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.13
SNAPC3-204ENST00000461041 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
SNAPC3-204ENST00000461041 ST20-MTHFSA0A0A6YYL1 179 aa28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 PLEKHG3A1L390 1219 aa28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 PHF23Q9BUL5 403 aaPredicted RBP28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 SBNO1A3KN83 1393 aa28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 USP47Q96K76 1375 aa28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 PPIP5K1Q6PFW1 1433 aa28.31■■■□□ 2.12
SNAPC3-204ENST00000461041 TNS3Q68CZ2 1445 aa28.3■■■□□ 2.12
SNAPC3-204ENST00000461041 POLR3AO14802 1390 aaPredicted RBP28.29■■■□□ 2.12
SNAPC3-204ENST00000461041 TRPM3Q9HCF6 1732 aaPredicted RBP28.29■■■□□ 2.12
SNAPC3-204ENST00000461041 ACEP12821 1306 aa28.28■■■□□ 2.12
SNAPC3-204ENST00000461041 TESK2Q96S53 571 aa28.27■■■□□ 2.12
SNAPC3-204ENST00000461041 MEX3CQ5U5Q3 659 aaKnown RBP28.26■■■□□ 2.11
SNAPC3-204ENST00000461041 CABP1Q9NZU7 370 aa28.25■■■□□ 2.11
SNAPC3-204ENST00000461041 ATAD2Q6PL18 1390 aa28.24■■■□□ 2.11
SNAPC3-204ENST00000461041 LMOD2Q6P5Q4 547 aa28.23■■■□□ 2.11
SNAPC3-204ENST00000461041 ARHGEF10O15013 1369 aa28.23■■■□□ 2.11
SNAPC3-204ENST00000461041 ALS2Q96Q42 1657 aa28.22■■■□□ 2.11
SNAPC3-204ENST00000461041 RGS17Q9UGC6 210 aaPredicted RBP28.21■■■□□ 2.11
SNAPC3-204ENST00000461041 SLC24A1O60721 1099 aa28.2■■■□□ 2.1
SNAPC3-204ENST00000461041 PAK3O75914 559 aaPredicted RBP28.2■■■□□ 2.1
SNAPC3-204ENST00000461041 ADAMTS2O95450 1211 aa28.19■■■□□ 2.1
SNAPC3-204ENST00000461041 PUS7Q96PZ0 661 aaKnown RBP28.17■■■□□ 2.1
SNAPC3-204ENST00000461041 C8orf37Q96NL8 207 aa28.15■■■□□ 2.1
SNAPC3-204ENST00000461041 PLEKHG5O94827 1062 aa28.14■■■□□ 2.1
SNAPC3-204ENST00000461041 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
SNAPC3-204ENST00000461041 USP6P35125 1406 aa28.14■■■□□ 2.1
SNAPC3-204ENST00000461041 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
SNAPC3-204ENST00000461041 TMF1P82094 1093 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms