RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 YTHDC2Q9H6S0 1430 aaKnown RBP33.68■■■□□ 2.98
PTPN4-207ENST00000460162 NUTM2BA6NNL0 878 aaPredicted RBP33.66■■■□□ 2.98
PTPN4-207ENST00000460162 NUTM2EB1AL46 878 aaPredicted RBP33.66■■■□□ 2.98
PTPN4-207ENST00000460162 NUTM2AQ8IVF1 878 aaPredicted RBP33.66■■■□□ 2.98
PTPN4-207ENST00000460162 ORAI2Q96SN7 254 aa33.66■■■□□ 2.98
PTPN4-207ENST00000460162 SOS2Q07890 1332 aaPredicted RBP33.65■■■□□ 2.98
PTPN4-207ENST00000460162 STK26Q9P289 416 aa33.64■■■□□ 2.98
PTPN4-207ENST00000460162 FMN2Q9NZ56 1722 aa33.64■■■□□ 2.98
PTPN4-207ENST00000460162 COL22A1Q8NFW1 1626 aaPredicted RBP33.62■■■□□ 2.97
PTPN4-207ENST00000460162 TMEM132EQ6IEE7 984 aa33.62■■■□□ 2.97
PTPN4-207ENST00000460162 PLEKHH1Q9ULM0 1364 aa33.6■■■□□ 2.97
PTPN4-207ENST00000460162 C14orf93Q9H972 538 aaKnown RBP33.59■■■□□ 2.97
PTPN4-207ENST00000460162 WAPLQ7Z5K2 1190 aa33.58■■■□□ 2.97
PTPN4-207ENST00000460162 KIF1AQ12756 1690 aa33.57■■■□□ 2.96
PTPN4-207ENST00000460162 NPHP3Q7Z494 1330 aa33.56■■■□□ 2.96
PTPN4-207ENST00000460162 PXDNQ92626 1479 aa33.56■■■□□ 2.96
PTPN4-207ENST00000460162 AFF2P51816 1311 aa33.55■■■□□ 2.96
PTPN4-207ENST00000460162 HRCP23327 699 aa33.55■■■□□ 2.96
PTPN4-207ENST00000460162 SIRT1Q96EB6 747 aa33.55■■■□□ 2.96
PTPN4-207ENST00000460162 ESCO1Q5FWF5 840 aa33.54■■■□□ 2.96
PTPN4-207ENST00000460162 DHX57Q6P158 1386 aaKnown RBP33.54■■■□□ 2.96
PTPN4-207ENST00000460162 DLC1Q96QB1 1528 aa33.53■■■□□ 2.96
PTPN4-207ENST00000460162 CDK12Q9NYV4 1490 aaPredicted RBP33.53■■■□□ 2.96
PTPN4-207ENST00000460162 CFAP70Q5T0N1 1121 aa33.51■■■□□ 2.95
PTPN4-207ENST00000460162 ADGRB1O14514 1584 aa33.51■■■□□ 2.95
PTPN4-207ENST00000460162 C8orf37Q96NL8 207 aa33.5■■■□□ 2.95
PTPN4-207ENST00000460162 RXRBP28702 533 aa33.47■■■□□ 2.95
PTPN4-207ENST00000460162 ADGRB2O60241 1585 aa33.46■■■□□ 2.95
PTPN4-207ENST00000460162 MARF1Q9Y4F3 1742 aaKnown RBP33.45■■■□□ 2.94
PTPN4-207ENST00000460162 NUTM2FA1L443 756 aa33.44■■■□□ 2.94
PTPN4-207ENST00000460162 RGPD8O14715 1765 aaPredicted RBP33.43■■■□□ 2.94
PTPN4-207ENST00000460162 FOXO3O43524 673 aa33.43■■■□□ 2.94
PTPN4-207ENST00000460162 ADAMTS2O95450 1211 aa33.42■■■□□ 2.94
PTPN4-207ENST00000460162 STAC3Q96MF2 364 aa33.4■■■□□ 2.94
PTPN4-207ENST00000460162 PRAM1Q96QH2 718 aa33.39■■■□□ 2.94
PTPN4-207ENST00000460162 NGLY1Q96IV0 654 aa33.38■■■□□ 2.93
PTPN4-207ENST00000460162 XPCQ01831 940 aaPredicted RBP33.37■■■□□ 2.93
PTPN4-207ENST00000460162 RGS12O14924 1447 aa33.36■■■□□ 2.93
PTPN4-207ENST00000460162 DCAF11Q8TEB1 546 aa33.35■■■□□ 2.93
PTPN4-207ENST00000460162 ANKARQ7Z5J8 1434 aa33.35■■■□□ 2.93
PTPN4-207ENST00000460162 USP32Q8NFA0 1604 aa33.35■■■□□ 2.93
PTPN4-207ENST00000460162 RBM6P78332 1123 aaKnown RBP33.34■■■□□ 2.93
PTPN4-207ENST00000460162 QTRT2Q9H974 415 aaKnown RBP33.33■■■□□ 2.93
PTPN4-207ENST00000460162 POGKQ9P215 609 aa33.33■■■□□ 2.93
PTPN4-207ENST00000460162 SAFB2Q14151 953 aaKnown RBP eCLIP33.32■■■□□ 2.92
PTPN4-207ENST00000460162 FNBP4Q8N3X1 1017 aaPredicted RBP33.3■■■□□ 2.92
PTPN4-207ENST00000460162 KDM2AQ9Y2K7 1162 aa33.3■■■□□ 2.92
PTPN4-207ENST00000460162 ARHGEF28Q8N1W1 1705 aaKnown RBP33.3■■■□□ 2.92
PTPN4-207ENST00000460162 SPATA31A3Q5VYP0 1347 aa33.29■■■□□ 2.92
PTPN4-207ENST00000460162 USP21Q9UK80 565 aa33.29■■■□□ 2.92
PTPN4-207ENST00000460162 PHF8Q9UPP1 1060 aa33.29■■■□□ 2.92
PTPN4-207ENST00000460162 TNS3Q68CZ2 1445 aa33.28■■■□□ 2.92
PTPN4-207ENST00000460162 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.28■■■□□ 2.92
PTPN4-207ENST00000460162 EIF3AQ14152 1382 aaKnown RBP33.27■■■□□ 2.92
PTPN4-207ENST00000460162 ATRNO75882 1429 aa33.27■■■□□ 2.92
PTPN4-207ENST00000460162 KIAA1210Q9ULL0 1709 aa33.26■■■□□ 2.92
PTPN4-207ENST00000460162 TRPC5Q9UL62 973 aaPredicted RBP33.26■■■□□ 2.91
PTPN4-207ENST00000460162 TRAK1Q9UPV9 953 aa33.26■■■□□ 2.91
PTPN4-207ENST00000460162 TULP4Q9NRJ4 1543 aa33.25■■■□□ 2.91
PTPN4-207ENST00000460162 KRT28Q7Z3Y7 464 aa33.25■■■□□ 2.91
PTPN4-207ENST00000460162 UPF1Q92900 1129 aaKnown RBP eCLIP33.25■■■□□ 2.91
PTPN4-207ENST00000460162 ABCA3Q99758 1704 aa33.24■■■□□ 2.91
PTPN4-207ENST00000460162 SBNO1A3KN83 1393 aa33.22■■■□□ 2.91
PTPN4-207ENST00000460162 BCL9LQ86UU0 1499 aa33.21■■■□□ 2.91
PTPN4-207ENST00000460162 PSME1Q06323 249 aa33.21■■■□□ 2.91
PTPN4-207ENST00000460162 TRPM3Q9HCF6 1732 aaPredicted RBP33.19■■■□□ 2.9
PTPN4-207ENST00000460162 ITSN1Q15811 1721 aa33.18■■■□□ 2.9
PTPN4-207ENST00000460162 MINK1Q8N4C8 1332 aaPredicted RBP33.17■■■□□ 2.9
PTPN4-207ENST00000460162 ARHGEF10O15013 1369 aa33.17■■■□□ 2.9
PTPN4-207ENST00000460162 HIRIP3Q9BW71 556 aaPredicted RBP33.16■■■□□ 2.9
PTPN4-207ENST00000460162 SLIT2O94813 1529 aa33.16■■■□□ 2.9
PTPN4-207ENST00000460162 PLCH1Q4KWH8 1693 aa33.13■■■□□ 2.89
PTPN4-207ENST00000460162 ALS2Q96Q42 1657 aa33.13■■■□□ 2.89
PTPN4-207ENST00000460162 PRR36Q9H6K5 1346 aa33.12■■■□□ 2.89
PTPN4-207ENST00000460162 WASLO00401 505 aaPredicted RBP33.12■■■□□ 2.89
PTPN4-207ENST00000460162 NWD2Q9ULI1 1742 aa33.11■■■□□ 2.89
PTPN4-207ENST00000460162 PMFBP1Q8TBY8 1022 aa33.11■■■□□ 2.89
PTPN4-207ENST00000460162 ATP7BP35670 1465 aa33.1■■■□□ 2.89
PTPN4-207ENST00000460162 ATAD2Q6PL18 1390 aa33.09■■■□□ 2.89
PTPN4-207ENST00000460162 HAP1P54257 671 aaPredicted RBP33.08■■■□□ 2.89
PTPN4-207ENST00000460162 GPRASP1Q5JY77 1395 aa33.08■■■□□ 2.89
PTPN4-207ENST00000460162 GLI3P10071 1580 aa33.06■■■□□ 2.88
PTPN4-207ENST00000460162 TOPAZ1Q8N9V7 1692 aa33.06■■■□□ 2.88
PTPN4-207ENST00000460162 UNC5CLQ8IV45 518 aa33.05■■■□□ 2.88
PTPN4-207ENST00000460162 LMOD2Q6P5Q4 547 aa33.04■■■□□ 2.88
PTPN4-207ENST00000460162 GJD4Q96KN9 370 aaPredicted RBP33.04■■■□□ 2.88
PTPN4-207ENST00000460162 CRYBG1Q9Y4K1 1723 aa33.03■■■□□ 2.88
PTPN4-207ENST00000460162 RALGAPBQ86X10 1494 aa33.03■■■□□ 2.88
PTPN4-207ENST00000460162 CABLES1Q8TDN4 633 aa33.02■■■□□ 2.88
PTPN4-207ENST00000460162 NRAPQ86VF7 1730 aa32.98■■■□□ 2.87
PTPN4-207ENST00000460162 COL14A1Q05707 1796 aaKnown RBP32.96■■■□□ 2.87
PTPN4-207ENST00000460162 EP400Q96L91 3159 aa32.96■■■□□ 2.87
PTPN4-207ENST00000460162 NGDNQ8NEJ9 315 aaKnown RBP32.96■■■□□ 2.87
PTPN4-207ENST00000460162 PLEKHG5O94827 1062 aa32.94■■■□□ 2.86
PTPN4-207ENST00000460162 NUDT16Q96DE0 195 aaKnown RBP32.94■■■□□ 2.86
PTPN4-207ENST00000460162 NBPF1Q3BBV0 1214 aa32.93■■■□□ 2.86
PTPN4-207ENST00000460162 QRICH2Q9H0J4 1663 aa32.93■■■□□ 2.86
PTPN4-207ENST00000460162 VPS72Q15906 364 aa32.91■■■□□ 2.86
PTPN4-207ENST00000460162 CDK19Q9BWU1 502 aa32.91■■■□□ 2.86
PTPN4-207ENST00000460162 TRPM1Q7Z4N2 1603 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms