RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
TMEM50B-205ENST00000459909 VGFO15240 615 aaPredicted RBP25.3■■□□□ 1.64
TMEM50B-205ENST00000459909 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
TMEM50B-205ENST00000459909 BLMP54132 1417 aaPredicted RBP25.29■■□□□ 1.64
TMEM50B-205ENST00000459909 CLTCL1P53675 1640 aa25.28■■□□□ 1.64
TMEM50B-205ENST00000459909 ESCO1Q5FWF5 840 aa25.28■■□□□ 1.64
TMEM50B-205ENST00000459909 ITGAEP38570 1179 aa25.26■■□□□ 1.63
TMEM50B-205ENST00000459909 PXDNQ92626 1479 aa25.26■■□□□ 1.63
TMEM50B-205ENST00000459909 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
TMEM50B-205ENST00000459909 LRPPRCP42704 1394 aaKnown RBP25.23■■□□□ 1.63
TMEM50B-205ENST00000459909 FOXO3O43524 673 aa25.23■■□□□ 1.63
TMEM50B-205ENST00000459909 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
TMEM50B-205ENST00000459909 MARF1Q9Y4F3 1742 aaKnown RBP25.21■■□□□ 1.63
TMEM50B-205ENST00000459909 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
TMEM50B-205ENST00000459909 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
TMEM50B-205ENST00000459909 CDC42BPGQ6DT37 1551 aa25.21■■□□□ 1.63
TMEM50B-205ENST00000459909 RPGRIP1LQ68CZ1 1315 aa25.2■■□□□ 1.62
TMEM50B-205ENST00000459909 DEFB132Q7Z7B7 95 aa25.2■■□□□ 1.62
TMEM50B-205ENST00000459909 SLIT2O94813 1529 aa25.2■■□□□ 1.62
TMEM50B-205ENST00000459909 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.2■■□□□ 1.62
TMEM50B-205ENST00000459909 KIF1BO60333 1816 aa25.19■■□□□ 1.62
TMEM50B-205ENST00000459909 GLI3P10071 1580 aa25.18■■□□□ 1.62
TMEM50B-205ENST00000459909 LRP5O75197 1615 aa25.15■■□□□ 1.62
TMEM50B-205ENST00000459909 SEPT12Q8IYM1 358 aa25.14■■□□□ 1.62
TMEM50B-205ENST00000459909 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
TMEM50B-205ENST00000459909 NAIPQ13075 1403 aa25.12■■□□□ 1.61
TMEM50B-205ENST00000459909 NUTM2FA1L443 756 aa25.1■■□□□ 1.61
TMEM50B-205ENST00000459909 ONECUT3O60422 494 aaPredicted RBP25.09■■□□□ 1.61
TMEM50B-205ENST00000459909 VPS72Q15906 364 aa25.09■■□□□ 1.61
TMEM50B-205ENST00000459909 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
TMEM50B-205ENST00000459909 KRT27Q7Z3Y8 459 aa25.07■■□□□ 1.6
TMEM50B-205ENST00000459909 USP32Q8NFA0 1604 aa25.07■■□□□ 1.6
TMEM50B-205ENST00000459909 TECPR2O15040 1411 aa25.06■■□□□ 1.6
TMEM50B-205ENST00000459909 WAPLQ7Z5K2 1190 aa25.06■■□□□ 1.6
TMEM50B-205ENST00000459909 BRWD3Q6RI45 1802 aa25.06■■□□□ 1.6
TMEM50B-205ENST00000459909 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
TMEM50B-205ENST00000459909 BAG6P46379 1132 aa25.04■■□□□ 1.6
TMEM50B-205ENST00000459909 KRT28Q7Z3Y7 464 aa25.04■■□□□ 1.6
TMEM50B-205ENST00000459909 PPLO60437 1756 aa25.03■■□□□ 1.6
TMEM50B-205ENST00000459909 HRCP23327 699 aa25.03■■□□□ 1.6
TMEM50B-205ENST00000459909 STK26Q9P289 416 aa25.03■■□□□ 1.6
TMEM50B-205ENST00000459909 CCDC9Q9Y3X0 531 aaKnown RBP25.03■■□□□ 1.6
TMEM50B-205ENST00000459909 PSDA5PKW4 1024 aaPredicted RBP25.02■■□□□ 1.6
TMEM50B-205ENST00000459909 ABCC11Q96J66 1382 aa25.01■■□□□ 1.59
TMEM50B-205ENST00000459909 KIF1AQ12756 1690 aa25.01■■□□□ 1.59
TMEM50B-205ENST00000459909 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
TMEM50B-205ENST00000459909 PSME1Q06323 249 aa24.99■■□□□ 1.59
TMEM50B-205ENST00000459909 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
TMEM50B-205ENST00000459909 PLEKHH1Q9ULM0 1364 aa24.98■■□□□ 1.59
TMEM50B-205ENST00000459909 CABLES1Q8TDN4 633 aa24.98■■□□□ 1.59
TMEM50B-205ENST00000459909 RRBP1Q9P2E9 1410 aaKnown RBP24.97■■□□□ 1.59
TMEM50B-205ENST00000459909 FMN2Q9NZ56 1722 aa24.96■■□□□ 1.59
TMEM50B-205ENST00000459909 NWD2Q9ULI1 1742 aa24.96■■□□□ 1.59
TMEM50B-205ENST00000459909 SLC4A1APQ9BWU0 796 aaKnown RBP24.96■■□□□ 1.59
TMEM50B-205ENST00000459909 A0A0G2JS52 829 aa24.95■■□□□ 1.58
TMEM50B-205ENST00000459909 MYT1Q01538 1121 aa24.95■■□□□ 1.58
TMEM50B-205ENST00000459909 PHF8Q9UPP1 1060 aa24.95■■□□□ 1.58
TMEM50B-205ENST00000459909 PLCH1Q4KWH8 1693 aa24.94■■□□□ 1.58
TMEM50B-205ENST00000459909 SBNO1A3KN83 1393 aa24.93■■□□□ 1.58
TMEM50B-205ENST00000459909 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
TMEM50B-205ENST00000459909 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
TMEM50B-205ENST00000459909 ARHGEF10O15013 1369 aa24.93■■□□□ 1.58
TMEM50B-205ENST00000459909 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
TMEM50B-205ENST00000459909 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
TMEM50B-205ENST00000459909 PLEKHG5O94827 1062 aa24.91■■□□□ 1.58
TMEM50B-205ENST00000459909 LMOD2Q6P5Q4 547 aa24.91■■□□□ 1.58
TMEM50B-205ENST00000459909 SIRT1Q96EB6 747 aa24.91■■□□□ 1.58
TMEM50B-205ENST00000459909 KNDC1Q76NI1 1749 aa24.91■■□□□ 1.58
TMEM50B-205ENST00000459909 EN1Q05925 392 aaPredicted RBP24.9■■□□□ 1.58
TMEM50B-205ENST00000459909 FAM98CQ17RN3 349 aaKnown RBP24.9■■□□□ 1.58
TMEM50B-205ENST00000459909 YTHDC2Q9H6S0 1430 aaKnown RBP24.89■■□□□ 1.58
TMEM50B-205ENST00000459909 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
TMEM50B-205ENST00000459909 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
TMEM50B-205ENST00000459909 R3HDM1Q15032 1099 aaKnown RBP24.87■■□□□ 1.57
TMEM50B-205ENST00000459909 PIK3C2GO75747 1445 aa24.86■■□□□ 1.57
TMEM50B-205ENST00000459909 BTG4Q9NY30 223 aa24.85■■□□□ 1.57
TMEM50B-205ENST00000459909 DISP2A7MBM2 1401 aa24.85■■□□□ 1.57
TMEM50B-205ENST00000459909 SPATA31E1Q6ZUB1 1445 aa24.85■■□□□ 1.57
TMEM50B-205ENST00000459909 ABCA3Q99758 1704 aa24.84■■□□□ 1.57
TMEM50B-205ENST00000459909 RGPD1P0DJD0 1748 aa24.82■■□□□ 1.56
TMEM50B-205ENST00000459909 NRAPQ86VF7 1730 aa24.81■■□□□ 1.56
TMEM50B-205ENST00000459909 FAM182BQ5T319 152 aa24.8■■□□□ 1.56
TMEM50B-205ENST00000459909 IFT172Q9UG01 1749 aa24.8■■□□□ 1.56
TMEM50B-205ENST00000459909 SPATA31A5Q5VU36 1347 aa24.79■■□□□ 1.56
TMEM50B-205ENST00000459909 SPATA31A7Q8IWB4 1347 aa24.79■■□□□ 1.56
TMEM50B-205ENST00000459909 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
TMEM50B-205ENST00000459909 RGPD8O14715 1765 aaPredicted RBP24.77■■□□□ 1.56
TMEM50B-205ENST00000459909 EZH2Q15910 746 aaKnown RBP24.77■■□□□ 1.56
TMEM50B-205ENST00000459909 PMFBP1Q8TBY8 1022 aa24.77■■□□□ 1.56
TMEM50B-205ENST00000459909 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
TMEM50B-205ENST00000459909 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
TMEM50B-205ENST00000459909 COL14A1Q05707 1796 aaKnown RBP24.75■■□□□ 1.55
TMEM50B-205ENST00000459909 PRAM1Q96QH2 718 aa24.75■■□□□ 1.55
TMEM50B-205ENST00000459909 CAMKK2Q96RR4 588 aa24.74■■□□□ 1.55
TMEM50B-205ENST00000459909 YY1P25490 414 aa24.73■■□□□ 1.55
TMEM50B-205ENST00000459909 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.55
TMEM50B-205ENST00000459909 THSD7AQ9UPZ6 1657 aa24.72■■□□□ 1.55
TMEM50B-205ENST00000459909 GPRASP1Q5JY77 1395 aa24.72■■□□□ 1.55
TMEM50B-205ENST00000459909 ADGRB2O60241 1585 aa24.71■■□□□ 1.55
TMEM50B-205ENST00000459909 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms