RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 COL16A1Q07092 1604 aaPredicted RBP29.97■■■□□ 2.39
VARS-218ENST00000459667 KIAA1210Q9ULL0 1709 aa29.97■■■□□ 2.39
VARS-218ENST00000459667 DISP3Q9P2K9 1392 aa29.97■■■□□ 2.39
VARS-218ENST00000459667 MED1Q15648 1581 aaPredicted RBP29.96■■■□□ 2.39
VARS-218ENST00000459667 L3MBTL2Q969R5 705 aa29.96■■■□□ 2.39
VARS-218ENST00000459667 PRAM1Q96QH2 718 aa29.95■■■□□ 2.39
VARS-218ENST00000459667 TRAK1Q9UPV9 953 aa29.94■■■□□ 2.38
VARS-218ENST00000459667 NHSL1Q5SYE7 1610 aa29.93■■■□□ 2.38
VARS-218ENST00000459667 SAFB2Q14151 953 aaKnown RBP eCLIP29.91■■■□□ 2.38
VARS-218ENST00000459667 POGKQ9P215 609 aa29.91■■■□□ 2.38
VARS-218ENST00000459667 FMN2Q9NZ56 1722 aa29.9■■■□□ 2.38
VARS-218ENST00000459667 ARHGEF28Q8N1W1 1705 aaKnown RBP29.88■■■□□ 2.37
VARS-218ENST00000459667 PCGF6Q9BYE7 350 aa29.88■■■□□ 2.37
VARS-218ENST00000459667 JCADQ9P266 1359 aa29.88■■■□□ 2.37
VARS-218ENST00000459667 ORAI2Q96SN7 254 aa29.87■■■□□ 2.37
VARS-218ENST00000459667 ADGRB2O60241 1585 aa29.85■■■□□ 2.37
VARS-218ENST00000459667 NUTM2FA1L443 756 aa29.84■■■□□ 2.37
VARS-218ENST00000459667 NBPF1Q3BBV0 1214 aa29.84■■■□□ 2.37
VARS-218ENST00000459667 DDX17Q92841 729 aaKnown RBP29.83■■■□□ 2.37
VARS-218ENST00000459667 ESCO1Q5FWF5 840 aa29.82■■■□□ 2.36
VARS-218ENST00000459667 SHPRHQ149N8 1683 aa29.81■■■□□ 2.36
VARS-218ENST00000459667 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
VARS-218ENST00000459667 TRPM1Q7Z4N2 1603 aa29.8■■■□□ 2.36
VARS-218ENST00000459667 MINK1Q8N4C8 1332 aaPredicted RBP29.79■■■□□ 2.36
VARS-218ENST00000459667 HIRIP3Q9BW71 556 aaPredicted RBP29.77■■■□□ 2.36
VARS-218ENST00000459667 KIF1AQ12756 1690 aa29.76■■■□□ 2.35
VARS-218ENST00000459667 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
VARS-218ENST00000459667 LRRC59Q96AG4 307 aaKnown RBP29.75■■■□□ 2.35
VARS-218ENST00000459667 PHF23Q9BUL5 403 aaPredicted RBP29.75■■■□□ 2.35
VARS-218ENST00000459667 SOS2Q07890 1332 aaPredicted RBP29.73■■■□□ 2.35
VARS-218ENST00000459667 SPATA31A6Q5VVP1 1343 aa29.73■■■□□ 2.35
VARS-218ENST00000459667 NPHP3Q7Z494 1330 aa29.73■■■□□ 2.35
VARS-218ENST00000459667 ANKARQ7Z5J8 1434 aa29.72■■■□□ 2.35
VARS-218ENST00000459667 USP32Q8NFA0 1604 aa29.72■■■□□ 2.35
VARS-218ENST00000459667 ROCK2O75116 1388 aaKnown RBP29.71■■■□□ 2.35
VARS-218ENST00000459667 EIF3AQ14152 1382 aaKnown RBP29.71■■■□□ 2.35
VARS-218ENST00000459667 NBPF8Q3BBV2 869 aa29.7■■■□□ 2.35
VARS-218ENST00000459667 TULP4Q9NRJ4 1543 aa29.7■■■□□ 2.34
VARS-218ENST00000459667 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
VARS-218ENST00000459667 FOXO3O43524 673 aa29.69■■■□□ 2.34
VARS-218ENST00000459667 PXDNQ92626 1479 aa29.68■■■□□ 2.34
VARS-218ENST00000459667 LRP6O75581 1613 aa29.67■■■□□ 2.34
VARS-218ENST00000459667 PNPLA6Q8IY17 1366 aa29.67■■■□□ 2.34
VARS-218ENST00000459667 PHF8Q9UPP1 1060 aa29.66■■■□□ 2.34
VARS-218ENST00000459667 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
VARS-218ENST00000459667 XPCQ01831 940 aaPredicted RBP29.65■■■□□ 2.34
VARS-218ENST00000459667 QRICH2Q9H0J4 1663 aa29.63■■■□□ 2.33
VARS-218ENST00000459667 ILDR2Q71H61 639 aa29.63■■■□□ 2.33
VARS-218ENST00000459667 PRR36Q9H6K5 1346 aa29.63■■■□□ 2.33
VARS-218ENST00000459667 GPRASP1Q5JY77 1395 aa29.62■■■□□ 2.33
VARS-218ENST00000459667 NUTM2BA6NNL0 878 aaPredicted RBP29.61■■■□□ 2.33
VARS-218ENST00000459667 NUTM2EB1AL46 878 aaPredicted RBP29.61■■■□□ 2.33
VARS-218ENST00000459667 NUTM2AQ8IVF1 878 aaPredicted RBP29.61■■■□□ 2.33
VARS-218ENST00000459667 RALGAPBQ86X10 1494 aa29.61■■■□□ 2.33
VARS-218ENST00000459667 MEX3CQ5U5Q3 659 aaKnown RBP29.6■■■□□ 2.33
VARS-218ENST00000459667 CLSPNQ9HAW4 1339 aa29.6■■■□□ 2.33
VARS-218ENST00000459667 ATP7BP35670 1465 aa29.6■■■□□ 2.33
VARS-218ENST00000459667 ITSN1Q15811 1721 aa29.59■■■□□ 2.33
VARS-218ENST00000459667 PMFBP1Q8TBY8 1022 aa29.58■■■□□ 2.33
VARS-218ENST00000459667 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
VARS-218ENST00000459667 COL22A1Q8NFW1 1626 aaPredicted RBP29.57■■■□□ 2.32
VARS-218ENST00000459667 KRT28Q7Z3Y7 464 aa29.57■■■□□ 2.32
VARS-218ENST00000459667 RGS17Q9UGC6 210 aaPredicted RBP29.56■■■□□ 2.32
VARS-218ENST00000459667 NUDT16Q96DE0 195 aaKnown RBP29.55■■■□□ 2.32
VARS-218ENST00000459667 CARD11Q9BXL7 1154 aa29.54■■■□□ 2.32
VARS-218ENST00000459667 PSME1Q06323 249 aa29.53■■■□□ 2.32
VARS-218ENST00000459667 TOPAZ1Q8N9V7 1692 aa29.53■■■□□ 2.32
VARS-218ENST00000459667 SPATA31A3Q5VYP0 1347 aa29.52■■■□□ 2.32
VARS-218ENST00000459667 TNS3Q68CZ2 1445 aa29.51■■■□□ 2.31
VARS-218ENST00000459667 SRPK2P78362 688 aaKnown RBP29.49■■■□□ 2.31
VARS-218ENST00000459667 CCER1Q8TC90 406 aaPredicted RBP29.49■■■□□ 2.31
VARS-218ENST00000459667 SBNO1A3KN83 1393 aa29.49■■■□□ 2.31
VARS-218ENST00000459667 NGDNQ8NEJ9 315 aaKnown RBP29.48■■■□□ 2.31
VARS-218ENST00000459667 TRPM3Q9HCF6 1732 aaPredicted RBP29.47■■■□□ 2.31
VARS-218ENST00000459667 CCDC61Q9Y6R9 512 aa29.46■■■□□ 2.31
VARS-218ENST00000459667 ADAMTS2O95450 1211 aa29.45■■■□□ 2.31
VARS-218ENST00000459667 CABP2Q9NPB3 220 aa29.45■■■□□ 2.31
VARS-218ENST00000459667 TIMELESSQ9UNS1 1208 aa29.45■■■□□ 2.31
VARS-218ENST00000459667 EVC2Q86UK5 1308 aa29.45■■■□□ 2.3
VARS-218ENST00000459667 POTEAQ6S8J7 498 aa29.43■■■□□ 2.3
VARS-218ENST00000459667 C8orf37Q96NL8 207 aa29.43■■■□□ 2.3
VARS-218ENST00000459667 ARHGEF10O15013 1369 aa29.42■■■□□ 2.3
VARS-218ENST00000459667 ZNF772Q68DY9 489 aaPredicted RBP29.41■■■□□ 2.3
VARS-218ENST00000459667 LMOD2Q6P5Q4 547 aa29.41■■■□□ 2.3
VARS-218ENST00000459667 PPIP5K1Q6PFW1 1433 aa29.41■■■□□ 2.3
VARS-218ENST00000459667 SBNO2Q9Y2G9 1366 aa29.4■■■□□ 2.3
VARS-218ENST00000459667 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
VARS-218ENST00000459667 AFF2P51816 1311 aa29.4■■■□□ 2.3
VARS-218ENST00000459667 POLR3AO14802 1390 aaPredicted RBP29.39■■■□□ 2.3
VARS-218ENST00000459667 PLEKHG3A1L390 1219 aa29.39■■■□□ 2.3
VARS-218ENST00000459667 MARF1Q9Y4F3 1742 aaKnown RBP29.39■■■□□ 2.3
VARS-218ENST00000459667 ACEP12821 1306 aa29.39■■■□□ 2.3
VARS-218ENST00000459667 NGLY1Q96IV0 654 aa29.36■■■□□ 2.29
VARS-218ENST00000459667 ABCA3Q99758 1704 aa29.36■■■□□ 2.29
VARS-218ENST00000459667 PAK3O75914 559 aaPredicted RBP29.35■■■□□ 2.29
VARS-218ENST00000459667 PLEKHG5O94827 1062 aa29.34■■■□□ 2.29
VARS-218ENST00000459667 HAP1P54257 671 aaPredicted RBP29.33■■■□□ 2.29
VARS-218ENST00000459667 CABLES1Q8TDN4 633 aa29.32■■■□□ 2.28
VARS-218ENST00000459667 CABP1Q9NZU7 370 aa29.31■■■□□ 2.28
VARS-218ENST00000459667 ATAD2Q6PL18 1390 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms