RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 SHPRHQ149N8 1683 aa20.52■□□□□ 0.88
NECAP2-204ENST00000459640 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
NECAP2-204ENST00000459640 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
NECAP2-204ENST00000459640 JCADQ9P266 1359 aa20.5■□□□□ 0.87
NECAP2-204ENST00000459640 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
NECAP2-204ENST00000459640 DLC1Q96QB1 1528 aa20.49■□□□□ 0.87
NECAP2-204ENST00000459640 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
NECAP2-204ENST00000459640 ARHGEF28Q8N1W1 1705 aaKnown RBP20.48■□□□□ 0.87
NECAP2-204ENST00000459640 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
NECAP2-204ENST00000459640 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
NECAP2-204ENST00000459640 SAFB2Q14151 953 aaKnown RBP eCLIP20.47■□□□□ 0.87
NECAP2-204ENST00000459640 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
NECAP2-204ENST00000459640 PRAM1Q96QH2 718 aa20.46■□□□□ 0.87
NECAP2-204ENST00000459640 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
NECAP2-204ENST00000459640 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
NECAP2-204ENST00000459640 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
NECAP2-204ENST00000459640 SIRT1Q96EB6 747 aa20.44■□□□□ 0.86
NECAP2-204ENST00000459640 LRP6O75581 1613 aa20.44■□□□□ 0.86
NECAP2-204ENST00000459640 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
NECAP2-204ENST00000459640 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
NECAP2-204ENST00000459640 POGKQ9P215 609 aa20.42■□□□□ 0.86
NECAP2-204ENST00000459640 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
NECAP2-204ENST00000459640 KIF1AQ12756 1690 aa20.41■□□□□ 0.86
NECAP2-204ENST00000459640 USP32Q8NFA0 1604 aa20.4■□□□□ 0.86
NECAP2-204ENST00000459640 SPATA31A6Q5VVP1 1343 aa20.38■□□□□ 0.85
NECAP2-204ENST00000459640 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
NECAP2-204ENST00000459640 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
NECAP2-204ENST00000459640 MINK1Q8N4C8 1332 aaPredicted RBP20.37■□□□□ 0.85
NECAP2-204ENST00000459640 LRRC59Q96AG4 307 aaKnown RBP20.37■□□□□ 0.85
NECAP2-204ENST00000459640 HIRIP3Q9BW71 556 aaPredicted RBP20.37■□□□□ 0.85
NECAP2-204ENST00000459640 TRPM1Q7Z4N2 1603 aa20.37■□□□□ 0.85
NECAP2-204ENST00000459640 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
NECAP2-204ENST00000459640 NUTM2BA6NNL0 878 aaPredicted RBP20.36■□□□□ 0.85
NECAP2-204ENST00000459640 NUTM2EB1AL46 878 aaPredicted RBP20.36■□□□□ 0.85
NECAP2-204ENST00000459640 NBPF1Q3BBV0 1214 aa20.36■□□□□ 0.85
NECAP2-204ENST00000459640 NUTM2AQ8IVF1 878 aaPredicted RBP20.36■□□□□ 0.85
NECAP2-204ENST00000459640 PXDNQ92626 1479 aa20.36■□□□□ 0.85
NECAP2-204ENST00000459640 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
NECAP2-204ENST00000459640 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
NECAP2-204ENST00000459640 FOXO3O43524 673 aa20.34■□□□□ 0.85
NECAP2-204ENST00000459640 MEX3CQ5U5Q3 659 aaKnown RBP20.34■□□□□ 0.85
NECAP2-204ENST00000459640 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.85
NECAP2-204ENST00000459640 SOCS7O14512 581 aa20.33■□□□□ 0.85
NECAP2-204ENST00000459640 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
NECAP2-204ENST00000459640 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
NECAP2-204ENST00000459640 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
NECAP2-204ENST00000459640 ANKARQ7Z5J8 1434 aa20.3■□□□□ 0.84
NECAP2-204ENST00000459640 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
NECAP2-204ENST00000459640 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
NECAP2-204ENST00000459640 PHF8Q9UPP1 1060 aa20.29■□□□□ 0.84
NECAP2-204ENST00000459640 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
NECAP2-204ENST00000459640 MARF1Q9Y4F3 1742 aaKnown RBP20.27■□□□□ 0.83
NECAP2-204ENST00000459640 WASLO00401 505 aaPredicted RBP20.26■□□□□ 0.83
NECAP2-204ENST00000459640 EIF3AQ14152 1382 aaKnown RBP20.25■□□□□ 0.83
NECAP2-204ENST00000459640 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
NECAP2-204ENST00000459640 TOPAZ1Q8N9V7 1692 aa20.25■□□□□ 0.83
NECAP2-204ENST00000459640 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
NECAP2-204ENST00000459640 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
NECAP2-204ENST00000459640 ATP7BP35670 1465 aa20.24■□□□□ 0.83
NECAP2-204ENST00000459640 TONSLQ96HA7 1378 aa20.23■□□□□ 0.83
NECAP2-204ENST00000459640 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
NECAP2-204ENST00000459640 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
NECAP2-204ENST00000459640 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
NECAP2-204ENST00000459640 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
NECAP2-204ENST00000459640 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
NECAP2-204ENST00000459640 AFF2P51816 1311 aa20.21■□□□□ 0.83
NECAP2-204ENST00000459640 SPATA31A3Q5VYP0 1347 aa20.21■□□□□ 0.83
NECAP2-204ENST00000459640 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
NECAP2-204ENST00000459640 TNS3Q68CZ2 1445 aa20.2■□□□□ 0.82
NECAP2-204ENST00000459640 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
NECAP2-204ENST00000459640 PSME1Q06323 249 aa20.19■□□□□ 0.82
NECAP2-204ENST00000459640 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
NECAP2-204ENST00000459640 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
NECAP2-204ENST00000459640 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
NECAP2-204ENST00000459640 ZNF772Q68DY9 489 aaPredicted RBP20.18■□□□□ 0.82
NECAP2-204ENST00000459640 NUDT16Q96DE0 195 aaKnown RBP20.18■□□□□ 0.82
NECAP2-204ENST00000459640 SBNO1A3KN83 1393 aa20.16■□□□□ 0.82
NECAP2-204ENST00000459640 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
NECAP2-204ENST00000459640 NGLY1Q96IV0 654 aa20.15■□□□□ 0.82
NECAP2-204ENST00000459640 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
NECAP2-204ENST00000459640 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.81
NECAP2-204ENST00000459640 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.81
NECAP2-204ENST00000459640 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
NECAP2-204ENST00000459640 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
NECAP2-204ENST00000459640 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
NECAP2-204ENST00000459640 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
NECAP2-204ENST00000459640 ARHGEF10O15013 1369 aa20.11■□□□□ 0.81
NECAP2-204ENST00000459640 PLCH1Q4KWH8 1693 aa20.1■□□□□ 0.81
NECAP2-204ENST00000459640 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
NECAP2-204ENST00000459640 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
NECAP2-204ENST00000459640 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
NECAP2-204ENST00000459640 CCDC61Q9Y6R9 512 aa20.09■□□□□ 0.81
NECAP2-204ENST00000459640 ACEP12821 1306 aa20.08■□□□□ 0.81
NECAP2-204ENST00000459640 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.08■□□□□ 0.81
NECAP2-204ENST00000459640 PAK3O75914 559 aaPredicted RBP20.08■□□□□ 0.81
NECAP2-204ENST00000459640 USP21Q9UK80 565 aa20.08■□□□□ 0.81
NECAP2-204ENST00000459640 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.8
NECAP2-204ENST00000459640 RXRBP28702 533 aa20.07■□□□□ 0.8
NECAP2-204ENST00000459640 QTRT2Q9H974 415 aaKnown RBP20.07■□□□□ 0.8
NECAP2-204ENST00000459640 PHRF1Q9P1Y6 1649 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms