RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 ZNF772Q68DY9 489 aaPredicted RBP23.42■■□□□ 1.34
COL16A1-205ENST00000458715 ORAI2Q96SN7 254 aa23.42■■□□□ 1.34
COL16A1-205ENST00000458715 POTEAQ6S8J7 498 aa23.41■■□□□ 1.34
COL16A1-205ENST00000458715 SHPRHQ149N8 1683 aa23.41■■□□□ 1.34
COL16A1-205ENST00000458715 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
COL16A1-205ENST00000458715 NHSL1Q5SYE7 1610 aa23.39■■□□□ 1.33
COL16A1-205ENST00000458715 SOS2Q07890 1332 aaPredicted RBP23.38■■□□□ 1.33
COL16A1-205ENST00000458715 NUTM2BA6NNL0 878 aaPredicted RBP23.38■■□□□ 1.33
COL16A1-205ENST00000458715 NUTM2EB1AL46 878 aaPredicted RBP23.38■■□□□ 1.33
COL16A1-205ENST00000458715 NUTM2AQ8IVF1 878 aaPredicted RBP23.38■■□□□ 1.33
COL16A1-205ENST00000458715 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
COL16A1-205ENST00000458715 DDX17Q92841 729 aaKnown RBP23.38■■□□□ 1.33
COL16A1-205ENST00000458715 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
COL16A1-205ENST00000458715 NPHP3Q7Z494 1330 aa23.37■■□□□ 1.33
COL16A1-205ENST00000458715 LAMC1P11047 1609 aa23.37■■□□□ 1.33
COL16A1-205ENST00000458715 LRP6O75581 1613 aa23.35■■□□□ 1.33
COL16A1-205ENST00000458715 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
COL16A1-205ENST00000458715 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
COL16A1-205ENST00000458715 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
COL16A1-205ENST00000458715 PLEKHH1Q9ULM0 1364 aa23.33■■□□□ 1.33
COL16A1-205ENST00000458715 POGKQ9P215 609 aa23.33■■□□□ 1.33
COL16A1-205ENST00000458715 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
COL16A1-205ENST00000458715 FOXO3O43524 673 aa23.3■■□□□ 1.32
COL16A1-205ENST00000458715 NUTM2FA1L443 756 aa23.28■■□□□ 1.32
COL16A1-205ENST00000458715 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
COL16A1-205ENST00000458715 AFF2P51816 1311 aa23.26■■□□□ 1.31
COL16A1-205ENST00000458715 RXRBP28702 533 aa23.25■■□□□ 1.31
COL16A1-205ENST00000458715 NGLY1Q96IV0 654 aa23.25■■□□□ 1.31
COL16A1-205ENST00000458715 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
COL16A1-205ENST00000458715 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
COL16A1-205ENST00000458715 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
COL16A1-205ENST00000458715 ADAMTS2O95450 1211 aa23.23■■□□□ 1.31
COL16A1-205ENST00000458715 PSME1Q06323 249 aa23.23■■□□□ 1.31
COL16A1-205ENST00000458715 ADGRB1O14514 1584 aa23.23■■□□□ 1.31
COL16A1-205ENST00000458715 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
COL16A1-205ENST00000458715 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
COL16A1-205ENST00000458715 PXDNQ92626 1479 aa23.2■■□□□ 1.3
COL16A1-205ENST00000458715 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
COL16A1-205ENST00000458715 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
COL16A1-205ENST00000458715 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
COL16A1-205ENST00000458715 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
COL16A1-205ENST00000458715 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
COL16A1-205ENST00000458715 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
COL16A1-205ENST00000458715 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
COL16A1-205ENST00000458715 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
COL16A1-205ENST00000458715 WASLO00401 505 aaPredicted RBP23.15■■□□□ 1.3
COL16A1-205ENST00000458715 FNBP4Q8N3X1 1017 aaPredicted RBP23.15■■□□□ 1.3
COL16A1-205ENST00000458715 CDK12Q9NYV4 1490 aaPredicted RBP23.15■■□□□ 1.3
COL16A1-205ENST00000458715 MINK1Q8N4C8 1332 aaPredicted RBP23.14■■□□□ 1.3
COL16A1-205ENST00000458715 USP21Q9UK80 565 aa23.14■■□□□ 1.29
COL16A1-205ENST00000458715 COL22A1Q8NFW1 1626 aaPredicted RBP23.14■■□□□ 1.29
COL16A1-205ENST00000458715 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
COL16A1-205ENST00000458715 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
COL16A1-205ENST00000458715 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
COL16A1-205ENST00000458715 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
COL16A1-205ENST00000458715 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
COL16A1-205ENST00000458715 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
COL16A1-205ENST00000458715 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
COL16A1-205ENST00000458715 HAP1P54257 671 aaPredicted RBP23.08■■□□□ 1.29
COL16A1-205ENST00000458715 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
COL16A1-205ENST00000458715 LMOD2Q6P5Q4 547 aa23.06■■□□□ 1.28
COL16A1-205ENST00000458715 TULP4Q9NRJ4 1543 aa23.05■■□□□ 1.28
COL16A1-205ENST00000458715 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
COL16A1-205ENST00000458715 L3MBTL2Q969R5 705 aa23.05■■□□□ 1.28
COL16A1-205ENST00000458715 KIAA1210Q9ULL0 1709 aa23.05■■□□□ 1.28
COL16A1-205ENST00000458715 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
COL16A1-205ENST00000458715 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
COL16A1-205ENST00000458715 PRR36Q9H6K5 1346 aa23.03■■□□□ 1.28
COL16A1-205ENST00000458715 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
COL16A1-205ENST00000458715 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
COL16A1-205ENST00000458715 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
COL16A1-205ENST00000458715 NEUROD1Q13562 356 aa23■■□□□ 1.27
COL16A1-205ENST00000458715 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
COL16A1-205ENST00000458715 UPF1Q92900 1129 aaKnown RBP eCLIP23■■□□□ 1.27
COL16A1-205ENST00000458715 CCDC61Q9Y6R9 512 aa23■■□□□ 1.27
COL16A1-205ENST00000458715 USP32Q8NFA0 1604 aa23■■□□□ 1.27
COL16A1-205ENST00000458715 ATRNO75882 1429 aa22.99■■□□□ 1.27
COL16A1-205ENST00000458715 BCL9LQ86UU0 1499 aa22.98■■□□□ 1.27
COL16A1-205ENST00000458715 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
COL16A1-205ENST00000458715 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
COL16A1-205ENST00000458715 CABLES1Q8TDN4 633 aa22.97■■□□□ 1.27
COL16A1-205ENST00000458715 GJD4Q96KN9 370 aaPredicted RBP22.97■■□□□ 1.27
COL16A1-205ENST00000458715 RGS12O14924 1447 aa22.97■■□□□ 1.27
COL16A1-205ENST00000458715 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
COL16A1-205ENST00000458715 PAK3O75914 559 aaPredicted RBP22.95■■□□□ 1.26
COL16A1-205ENST00000458715 SLIT2O94813 1529 aa22.94■■□□□ 1.26
COL16A1-205ENST00000458715 PLEKHG3A1L390 1219 aa22.94■■□□□ 1.26
COL16A1-205ENST00000458715 MARF1Q9Y4F3 1742 aaKnown RBP22.94■■□□□ 1.26
COL16A1-205ENST00000458715 ATP7BP35670 1465 aa22.93■■□□□ 1.26
COL16A1-205ENST00000458715 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
COL16A1-205ENST00000458715 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
COL16A1-205ENST00000458715 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
COL16A1-205ENST00000458715 VPS72Q15906 364 aa22.9■■□□□ 1.26
COL16A1-205ENST00000458715 NBPF8Q3BBV2 869 aa22.9■■□□□ 1.26
COL16A1-205ENST00000458715 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.26
COL16A1-205ENST00000458715 ACEP12821 1306 aa22.89■■□□□ 1.26
COL16A1-205ENST00000458715 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.25
COL16A1-205ENST00000458715 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
COL16A1-205ENST00000458715 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
COL16A1-205ENST00000458715 EVC2Q86UK5 1308 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms