RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 SPATA31E1Q6ZUB1 1445 aa27.85■■■□□ 2.05
HDAC11-216ENST00000458642 IFT172Q9UG01 1749 aa27.85■■■□□ 2.05
HDAC11-216ENST00000458642 RBM6P78332 1123 aaKnown RBP27.84■■■□□ 2.05
HDAC11-216ENST00000458642 CCDC144AA2RUR9 1427 aa27.84■■■□□ 2.05
HDAC11-216ENST00000458642 STK26Q9P289 416 aa27.83■■■□□ 2.05
HDAC11-216ENST00000458642 COL22A1Q8NFW1 1626 aaPredicted RBP27.82■■■□□ 2.04
HDAC11-216ENST00000458642 WAPLQ7Z5K2 1190 aa27.82■■■□□ 2.04
HDAC11-216ENST00000458642 XPCQ01831 940 aaPredicted RBP27.81■■■□□ 2.04
HDAC11-216ENST00000458642 ESCO1Q5FWF5 840 aa27.81■■■□□ 2.04
HDAC11-216ENST00000458642 NUTM2FA1L443 756 aa27.8■■■□□ 2.04
HDAC11-216ENST00000458642 TMEM132EQ6IEE7 984 aa27.8■■■□□ 2.04
HDAC11-216ENST00000458642 PLEKHH1Q9ULM0 1364 aa27.8■■■□□ 2.04
HDAC11-216ENST00000458642 PXDNQ92626 1479 aa27.8■■■□□ 2.04
HDAC11-216ENST00000458642 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
HDAC11-216ENST00000458642 USP21Q9UK80 565 aa27.78■■■□□ 2.04
HDAC11-216ENST00000458642 MYOM2P54296 1465 aa27.77■■■□□ 2.04
HDAC11-216ENST00000458642 TECPR2O15040 1411 aa27.77■■■□□ 2.04
HDAC11-216ENST00000458642 LRPPRCP42704 1394 aaKnown RBP27.76■■■□□ 2.03
HDAC11-216ENST00000458642 FOXO3O43524 673 aa27.76■■■□□ 2.03
HDAC11-216ENST00000458642 KNDC1Q76NI1 1749 aa27.75■■■□□ 2.03
HDAC11-216ENST00000458642 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
HDAC11-216ENST00000458642 NPHP3Q7Z494 1330 aa27.74■■■□□ 2.03
HDAC11-216ENST00000458642 ANKRD30BQ9BXX2 1392 aa27.73■■■□□ 2.03
HDAC11-216ENST00000458642 FNBP4Q8N3X1 1017 aaPredicted RBP27.73■■■□□ 2.03
HDAC11-216ENST00000458642 ABCC11Q96J66 1382 aa27.72■■■□□ 2.03
HDAC11-216ENST00000458642 ATRNO75882 1429 aa27.71■■■□□ 2.03
HDAC11-216ENST00000458642 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
HDAC11-216ENST00000458642 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
HDAC11-216ENST00000458642 MARF1Q9Y4F3 1742 aaKnown RBP27.7■■■□□ 2.02
HDAC11-216ENST00000458642 YTHDC2Q9H6S0 1430 aaKnown RBP27.69■■■□□ 2.02
HDAC11-216ENST00000458642 BCL9LQ86UU0 1499 aa27.69■■■□□ 2.02
HDAC11-216ENST00000458642 EP400Q96L91 3159 aa27.66■■■□□ 2.02
HDAC11-216ENST00000458642 RGPD8O14715 1765 aaPredicted RBP27.63■■■□□ 2.01
HDAC11-216ENST00000458642 ATAD2Q6PL18 1390 aa27.63■■■□□ 2.01
HDAC11-216ENST00000458642 CFAP70Q5T0N1 1121 aa27.61■■■□□ 2.01
HDAC11-216ENST00000458642 NRXN1Q9ULB1 1477 aa27.61■■■□□ 2.01
HDAC11-216ENST00000458642 KIF1AQ12756 1690 aa27.61■■■□□ 2.01
HDAC11-216ENST00000458642 SRCAPQ6ZRS2 3230 aa27.61■■■□□ 2.01
HDAC11-216ENST00000458642 C14orf93Q9H972 538 aaKnown RBP27.6■■■□□ 2.01
HDAC11-216ENST00000458642 SPATA31A3Q5VYP0 1347 aa27.59■■■□□ 2.01
HDAC11-216ENST00000458642 SAFB2Q14151 953 aaKnown RBP eCLIP27.57■■■□□ 2
HDAC11-216ENST00000458642 KRT28Q7Z3Y7 464 aa27.56■■■□□ 2
HDAC11-216ENST00000458642 USP32Q8NFA0 1604 aa27.55■■■□□ 2
HDAC11-216ENST00000458642 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.55■■■□□ 2
HDAC11-216ENST00000458642 SLIT2O94813 1529 aa27.54■■■□□ 2
HDAC11-216ENST00000458642 PLEKHG5O94827 1062 aa27.54■■■□□ 2
HDAC11-216ENST00000458642 GLI3P10071 1580 aa27.54■■■□□ 2
HDAC11-216ENST00000458642 GJD4Q96KN9 370 aaPredicted RBP27.54■■■□□ 2
HDAC11-216ENST00000458642 SIRT1Q96EB6 747 aa27.53■■■□□ 2
HDAC11-216ENST00000458642 PRAM1Q96QH2 718 aa27.53■■■□□ 2
HDAC11-216ENST00000458642 CABLES1Q8TDN4 633 aa27.52■■■□□ 2
HDAC11-216ENST00000458642 PHF8Q9UPP1 1060 aa27.52■■■□□ 2
HDAC11-216ENST00000458642 DHX57Q6P158 1386 aaKnown RBP27.51■■□□□ 1.99
HDAC11-216ENST00000458642 RALGAPBQ86X10 1494 aa27.51■■□□□ 1.99
HDAC11-216ENST00000458642 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
HDAC11-216ENST00000458642 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
HDAC11-216ENST00000458642 RAB3GAP2Q9H2M9 1393 aa27.49■■□□□ 1.99
HDAC11-216ENST00000458642 ABCA3Q99758 1704 aa27.48■■□□□ 1.99
HDAC11-216ENST00000458642 ADGRB1O14514 1584 aa27.47■■□□□ 1.99
HDAC11-216ENST00000458642 BRWD3Q6RI45 1802 aa27.45■■□□□ 1.98
HDAC11-216ENST00000458642 PLCH1Q4KWH8 1693 aa27.45■■□□□ 1.98
HDAC11-216ENST00000458642 DLC1Q96QB1 1528 aa27.45■■□□□ 1.98
HDAC11-216ENST00000458642 PMFBP1Q8TBY8 1022 aa27.44■■□□□ 1.98
HDAC11-216ENST00000458642 LMOD2Q6P5Q4 547 aa27.43■■□□□ 1.98
HDAC11-216ENST00000458642 HAP1P54257 671 aaPredicted RBP27.42■■□□□ 1.98
HDAC11-216ENST00000458642 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
HDAC11-216ENST00000458642 POGKQ9P215 609 aa27.42■■□□□ 1.98
HDAC11-216ENST00000458642 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
HDAC11-216ENST00000458642 SBNO1A3KN83 1393 aa27.41■■□□□ 1.98
HDAC11-216ENST00000458642 PSME1Q06323 249 aa27.41■■□□□ 1.98
HDAC11-216ENST00000458642 TRAK1Q9UPV9 953 aa27.4■■□□□ 1.98
HDAC11-216ENST00000458642 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
HDAC11-216ENST00000458642 KDM2AQ9Y2K7 1162 aa27.38■■□□□ 1.97
HDAC11-216ENST00000458642 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
HDAC11-216ENST00000458642 PRR36Q9H6K5 1346 aa27.38■■□□□ 1.97
HDAC11-216ENST00000458642 NWD2Q9ULI1 1742 aa27.37■■□□□ 1.97
HDAC11-216ENST00000458642 MINK1Q8N4C8 1332 aaPredicted RBP27.37■■□□□ 1.97
HDAC11-216ENST00000458642 ACIN1Q9UKV3 1341 aaKnown RBP27.37■■□□□ 1.97
HDAC11-216ENST00000458642 ARHGEF10O15013 1369 aa27.35■■□□□ 1.97
HDAC11-216ENST00000458642 VPS72Q15906 364 aa27.35■■□□□ 1.97
HDAC11-216ENST00000458642 CCDC125Q86Z20 511 aa27.35■■□□□ 1.97
HDAC11-216ENST00000458642 SEPT12Q8IYM1 358 aa27.35■■□□□ 1.97
HDAC11-216ENST00000458642 ZRANB1Q9UGI0 708 aa27.35■■□□□ 1.97
HDAC11-216ENST00000458642 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
HDAC11-216ENST00000458642 DCAF11Q8TEB1 546 aa27.33■■□□□ 1.97
HDAC11-216ENST00000458642 CCDC9Q9Y3X0 531 aaKnown RBP27.33■■□□□ 1.97
HDAC11-216ENST00000458642 ALS2Q96Q42 1657 aa27.33■■□□□ 1.97
HDAC11-216ENST00000458642 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.96
HDAC11-216ENST00000458642 DEFB132Q7Z7B7 95 aa27.32■■□□□ 1.96
HDAC11-216ENST00000458642 NRAPQ86VF7 1730 aa27.32■■□□□ 1.96
HDAC11-216ENST00000458642 TULP4Q9NRJ4 1543 aa27.31■■□□□ 1.96
HDAC11-216ENST00000458642 ONECUT3O60422 494 aaPredicted RBP27.27■■□□□ 1.96
HDAC11-216ENST00000458642 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
HDAC11-216ENST00000458642 WASLO00401 505 aaPredicted RBP27.26■■□□□ 1.95
HDAC11-216ENST00000458642 ARHGEF28Q8N1W1 1705 aaKnown RBP27.26■■□□□ 1.95
HDAC11-216ENST00000458642 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
HDAC11-216ENST00000458642 GPRASP1Q5JY77 1395 aa27.24■■□□□ 1.95
HDAC11-216ENST00000458642 COL14A1Q05707 1796 aaKnown RBP27.23■■□□□ 1.95
HDAC11-216ENST00000458642 KRT27Q7Z3Y8 459 aa27.23■■□□□ 1.95
HDAC11-216ENST00000458642 FAM98CQ17RN3 349 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms