RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 COL22A1Q8NFW1 1626 aaPredicted RBP39.5■■■■□ 3.91
PBRM1-218ENST00000458294 ADGRF5Q8IZF2 1346 aa39.48■■■■□ 3.91
PBRM1-218ENST00000458294 IFT172Q9UG01 1749 aa39.48■■■■□ 3.91
PBRM1-218ENST00000458294 SPATA31E1Q6ZUB1 1445 aa39.47■■■■□ 3.91
PBRM1-218ENST00000458294 TECPR2O15040 1411 aa39.46■■■■□ 3.91
PBRM1-218ENST00000458294 ANKRD30BQ9BXX2 1392 aa39.46■■■■□ 3.91
PBRM1-218ENST00000458294 NPHP3Q7Z494 1330 aa39.44■■■■□ 3.9
PBRM1-218ENST00000458294 ESCO1Q5FWF5 840 aa39.42■■■■□ 3.9
PBRM1-218ENST00000458294 RGL3Q3MIN7 710 aa39.41■■■■□ 3.9
PBRM1-218ENST00000458294 KNDC1Q76NI1 1749 aa39.4■■■■□ 3.9
PBRM1-218ENST00000458294 MPHOSPH9Q99550 1183 aa39.4■■■■□ 3.9
PBRM1-218ENST00000458294 USP21Q9UK80 565 aa39.4■■■■□ 3.9
PBRM1-218ENST00000458294 LRPPRCP42704 1394 aaKnown RBP39.4■■■■□ 3.9
PBRM1-218ENST00000458294 PXDNQ92626 1479 aa39.39■■■■□ 3.9
PBRM1-218ENST00000458294 FNBP4Q8N3X1 1017 aaPredicted RBP39.38■■■■□ 3.89
PBRM1-218ENST00000458294 MYOM2P54296 1465 aa39.37■■■■□ 3.89
PBRM1-218ENST00000458294 ABCC11Q96J66 1382 aa39.37■■■■□ 3.89
PBRM1-218ENST00000458294 TRPC5Q9UL62 973 aaPredicted RBP39.37■■■■□ 3.89
PBRM1-218ENST00000458294 STK26Q9P289 416 aa39.36■■■■□ 3.89
PBRM1-218ENST00000458294 PIK3C2GO75747 1445 aa39.35■■■■□ 3.89
PBRM1-218ENST00000458294 WAPLQ7Z5K2 1190 aa39.34■■■■□ 3.89
PBRM1-218ENST00000458294 FOXO3O43524 673 aa39.31■■■■□ 3.88
PBRM1-218ENST00000458294 MARF1Q9Y4F3 1742 aaKnown RBP39.31■■■■□ 3.88
PBRM1-218ENST00000458294 ATRNO75882 1429 aa39.31■■■■□ 3.88
PBRM1-218ENST00000458294 TMEM132EQ6IEE7 984 aa39.28■■■■□ 3.88
PBRM1-218ENST00000458294 ACIN1Q9UKV3 1341 aaKnown RBP39.28■■■■□ 3.88
PBRM1-218ENST00000458294 ATAD2Q6PL18 1390 aa39.28■■■■□ 3.88
PBRM1-218ENST00000458294 FMN2Q9NZ56 1722 aa39.28■■■■□ 3.88
PBRM1-218ENST00000458294 YTHDC2Q9H6S0 1430 aaKnown RBP39.27■■■■□ 3.88
PBRM1-218ENST00000458294 PLEKHH1Q9ULM0 1364 aa39.27■■■■□ 3.88
PBRM1-218ENST00000458294 NUTM2FA1L443 756 aa39.25■■■■□ 3.87
PBRM1-218ENST00000458294 XPCQ01831 940 aaPredicted RBP39.25■■■■□ 3.87
PBRM1-218ENST00000458294 KIF1AQ12756 1690 aa39.25■■■■□ 3.87
PBRM1-218ENST00000458294 SIRT1Q96EB6 747 aa39.21■■■■□ 3.87
PBRM1-218ENST00000458294 BCL9LQ86UU0 1499 aa39.21■■■■□ 3.87
PBRM1-218ENST00000458294 C14orf93Q9H972 538 aaKnown RBP39.17■■■■□ 3.86
PBRM1-218ENST00000458294 NRXN1Q9ULB1 1477 aa39.17■■■■□ 3.86
PBRM1-218ENST00000458294 SPATA31A3Q5VYP0 1347 aa39.14■■■■□ 3.86
PBRM1-218ENST00000458294 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.14■■■■□ 3.86
PBRM1-218ENST00000458294 DHX57Q6P158 1386 aaKnown RBP39.11■■■■□ 3.85
PBRM1-218ENST00000458294 GJD4Q96KN9 370 aaPredicted RBP39.09■■■■□ 3.85
PBRM1-218ENST00000458294 KRT28Q7Z3Y7 464 aa39.08■■■■□ 3.85
PBRM1-218ENST00000458294 RGPD8O14715 1765 aaPredicted RBP39.08■■■■□ 3.85
PBRM1-218ENST00000458294 CFAP70Q5T0N1 1121 aa39.07■■■■□ 3.85
PBRM1-218ENST00000458294 SLIT2O94813 1529 aa39.06■■■■□ 3.84
PBRM1-218ENST00000458294 USP32Q8NFA0 1604 aa39.06■■■■□ 3.84
PBRM1-218ENST00000458294 PHF8Q9UPP1 1060 aa39.04■■■■□ 3.84
PBRM1-218ENST00000458294 UNC5CLQ8IV45 518 aa39.03■■■■□ 3.84
PBRM1-218ENST00000458294 TNS3Q68CZ2 1445 aa39.03■■■■□ 3.84
PBRM1-218ENST00000458294 EP400Q96L91 3159 aa39.02■■■■□ 3.84
PBRM1-218ENST00000458294 DLC1Q96QB1 1528 aa39.01■■■■□ 3.84
PBRM1-218ENST00000458294 PSME1Q06323 249 aa39.01■■■■□ 3.84
PBRM1-218ENST00000458294 CCDC125Q86Z20 511 aa39■■■■□ 3.83
PBRM1-218ENST00000458294 PRAM1Q96QH2 718 aa39■■■■□ 3.83
PBRM1-218ENST00000458294 GLI3P10071 1580 aa38.99■■■■□ 3.83
PBRM1-218ENST00000458294 RALGAPBQ86X10 1494 aa38.98■■■■□ 3.83
PBRM1-218ENST00000458294 SBNO1A3KN83 1393 aa38.96■■■■□ 3.83
PBRM1-218ENST00000458294 HAP1P54257 671 aaPredicted RBP38.94■■■■□ 3.82
PBRM1-218ENST00000458294 SAFB2Q14151 953 aaKnown RBP eCLIP38.94■■■■□ 3.82
PBRM1-218ENST00000458294 ANKARQ7Z5J8 1434 aa38.94■■■■□ 3.82
PBRM1-218ENST00000458294 ADGRB2O60241 1585 aa38.94■■■■□ 3.82
PBRM1-218ENST00000458294 RAB3GAP2Q9H2M9 1393 aa38.94■■■■□ 3.82
PBRM1-218ENST00000458294 POGKQ9P215 609 aa38.92■■■■□ 3.82
PBRM1-218ENST00000458294 ARHGEF10O15013 1369 aa38.92■■■■□ 3.82
PBRM1-218ENST00000458294 ABCA3Q99758 1704 aa38.91■■■■□ 3.82
PBRM1-218ENST00000458294 ADGRB1O14514 1584 aa38.91■■■■□ 3.82
PBRM1-218ENST00000458294 NWD2Q9ULI1 1742 aa38.9■■■■□ 3.82
PBRM1-218ENST00000458294 PLCH1Q4KWH8 1693 aa38.89■■■■□ 3.82
PBRM1-218ENST00000458294 ZRANB1Q9UGI0 708 aa38.88■■■■□ 3.81
PBRM1-218ENST00000458294 CABLES1Q8TDN4 633 aa38.87■■■■□ 3.81
PBRM1-218ENST00000458294 VPS72Q15906 364 aa38.85■■■■□ 3.81
PBRM1-218ENST00000458294 LMOD2Q6P5Q4 547 aa38.84■■■■□ 3.81
PBRM1-218ENST00000458294 BRWD3Q6RI45 1802 aa38.83■■■■□ 3.81
PBRM1-218ENST00000458294 PMFBP1Q8TBY8 1022 aa38.82■■■■□ 3.8
PBRM1-218ENST00000458294 BLMP54132 1417 aaPredicted RBP38.81■■■■□ 3.8
PBRM1-218ENST00000458294 EIF3AQ14152 1382 aaKnown RBP38.81■■■■□ 3.8
PBRM1-218ENST00000458294 SRCAPQ6ZRS2 3230 aa38.8■■■■□ 3.8
PBRM1-218ENST00000458294 TRAK1Q9UPV9 953 aa38.8■■■■□ 3.8
PBRM1-218ENST00000458294 TRPM3Q9HCF6 1732 aaPredicted RBP38.79■■■■□ 3.8
PBRM1-218ENST00000458294 PLEKHG5O94827 1062 aa38.78■■■■□ 3.8
PBRM1-218ENST00000458294 SEPT12Q8IYM1 358 aa38.77■■■■□ 3.8
PBRM1-218ENST00000458294 STAC3Q96MF2 364 aa38.76■■■■□ 3.8
PBRM1-218ENST00000458294 TULP4Q9NRJ4 1543 aa38.76■■■■□ 3.8
PBRM1-218ENST00000458294 ONECUT3O60422 494 aaPredicted RBP38.75■■■■□ 3.79
PBRM1-218ENST00000458294 HIRIP3Q9BW71 556 aaPredicted RBP38.75■■■■□ 3.79
PBRM1-218ENST00000458294 CCDC9Q9Y3X0 531 aaKnown RBP38.74■■■■□ 3.79
PBRM1-218ENST00000458294 ALS2Q96Q42 1657 aa38.74■■■■□ 3.79
PBRM1-218ENST00000458294 GPRASP1Q5JY77 1395 aa38.73■■■■□ 3.79
PBRM1-218ENST00000458294 DCAF11Q8TEB1 546 aa38.73■■■■□ 3.79
PBRM1-218ENST00000458294 MINK1Q8N4C8 1332 aaPredicted RBP38.72■■■■□ 3.79
PBRM1-218ENST00000458294 FAM83GA6ND36 823 aa38.72■■■■□ 3.79
PBRM1-218ENST00000458294 KDM2AQ9Y2K7 1162 aa38.72■■■■□ 3.79
PBRM1-218ENST00000458294 PRR36Q9H6K5 1346 aa38.7■■■■□ 3.79
PBRM1-218ENST00000458294 NRAPQ86VF7 1730 aa38.7■■■■□ 3.79
PBRM1-218ENST00000458294 WASLO00401 505 aaPredicted RBP38.69■■■■□ 3.78
PBRM1-218ENST00000458294 COL14A1Q05707 1796 aaKnown RBP38.67■■■■□ 3.78
PBRM1-218ENST00000458294 SF3B2Q13435 895 aaKnown RBP38.66■■■■□ 3.78
PBRM1-218ENST00000458294 KRT27Q7Z3Y8 459 aa38.65■■■■□ 3.78
PBRM1-218ENST00000458294 HRCP23327 699 aa38.63■■■■□ 3.77
PBRM1-218ENST00000458294 ARHGEF28Q8N1W1 1705 aaKnown RBP38.63■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms