RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
LINC01888-202ENST00000457602 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
LINC01888-202ENST00000457602 UBAP1LF5GYI3 381 aa12.86□□□□□ -0.35
LINC01888-202ENST00000457602 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
LINC01888-202ENST00000457602 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
LINC01888-202ENST00000457602 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
LINC01888-202ENST00000457602 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
LINC01888-202ENST00000457602 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
LINC01888-202ENST00000457602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC01888-202ENST00000457602 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
LINC01888-202ENST00000457602 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
LINC01888-202ENST00000457602 UGGT1Q9NYU2 1555 aa12.83□□□□□ -0.36
LINC01888-202ENST00000457602 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
LINC01888-202ENST00000457602 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
LINC01888-202ENST00000457602 FOXK1P85037 733 aa12.82□□□□□ -0.36
LINC01888-202ENST00000457602 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
LINC01888-202ENST00000457602 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
LINC01888-202ENST00000457602 ABCC3O15438 1527 aa12.82□□□□□ -0.36
LINC01888-202ENST00000457602 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
LINC01888-202ENST00000457602 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
LINC01888-202ENST00000457602 ZC3H13Q5T200 1668 aaKnown RBP12.81□□□□□ -0.36
LINC01888-202ENST00000457602 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
LINC01888-202ENST00000457602 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
LINC01888-202ENST00000457602 DUOX2Q9NRD8 1548 aa12.81□□□□□ -0.36
LINC01888-202ENST00000457602 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
LINC01888-202ENST00000457602 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
LINC01888-202ENST00000457602 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
LINC01888-202ENST00000457602 KIF15Q9NS87 1388 aa12.8□□□□□ -0.36
LINC01888-202ENST00000457602 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 SLC34A2O95436 690 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 DSG2Q14126 1118 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 ABCC5O15440 1437 aa12.79□□□□□ -0.36
LINC01888-202ENST00000457602 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
LINC01888-202ENST00000457602 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 CEP152O94986 1710 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 CPS1P31327 1500 aa12.78□□□□□ -0.36
LINC01888-202ENST00000457602 TOM1O60784 492 aa12.77□□□□□ -0.37
LINC01888-202ENST00000457602 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
LINC01888-202ENST00000457602 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
LINC01888-202ENST00000457602 DAPK1P53355 1430 aa12.77□□□□□ -0.37
LINC01888-202ENST00000457602 ILDR2Q71H61 639 aa12.76□□□□□ -0.37
LINC01888-202ENST00000457602 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
LINC01888-202ENST00000457602 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
LINC01888-202ENST00000457602 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
LINC01888-202ENST00000457602 CROCC2H7BZ55 1655 aa12.76□□□□□ -0.37
LINC01888-202ENST00000457602 DEPDC5O75140 1603 aa12.75□□□□□ -0.37
LINC01888-202ENST00000457602 EMP3P54852 163 aa12.75□□□□□ -0.37
LINC01888-202ENST00000457602 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
LINC01888-202ENST00000457602 MED14O60244 1454 aa12.74□□□□□ -0.37
LINC01888-202ENST00000457602 KANK1Q14678 1352 aa12.74□□□□□ -0.37
LINC01888-202ENST00000457602 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
LINC01888-202ENST00000457602 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
LINC01888-202ENST00000457602 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
LINC01888-202ENST00000457602 PRDM15P57071 1507 aaPredicted RBP12.73□□□□□ -0.37
LINC01888-202ENST00000457602 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
LINC01888-202ENST00000457602 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
LINC01888-202ENST00000457602 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
LINC01888-202ENST00000457602 PDE4AP27815 886 aa12.72□□□□□ -0.37
LINC01888-202ENST00000457602 FAM50AQ14320 339 aaKnown RBP12.72□□□□□ -0.37
LINC01888-202ENST00000457602 MFSD10Q14728 455 aa12.72□□□□□ -0.37
LINC01888-202ENST00000457602 TXNDC2Q86VQ3 553 aa12.72□□□□□ -0.37
LINC01888-202ENST00000457602 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 HSPA1LP34931 641 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 EID1Q9Y6B2 187 aa12.71□□□□□ -0.37
LINC01888-202ENST00000457602 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.38
LINC01888-202ENST00000457602 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
LINC01888-202ENST00000457602 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
LINC01888-202ENST00000457602 SOCS7O14512 581 aa12.69□□□□□ -0.38
LINC01888-202ENST00000457602 PTCD2Q8WV60 388 aaKnown RBP12.69□□□□□ -0.38
LINC01888-202ENST00000457602 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01888-202ENST00000457602 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
LINC01888-202ENST00000457602 LTKP29376 864 aa12.68□□□□□ -0.38
LINC01888-202ENST00000457602 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
LINC01888-202ENST00000457602 FAM205CA6NFA0 338 aa12.67□□□□□ -0.38
LINC01888-202ENST00000457602 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
LINC01888-202ENST00000457602 SLIT1O75093 1534 aa12.67□□□□□ -0.38
LINC01888-202ENST00000457602 PIK3C2BO00750 1634 aa12.66□□□□□ -0.38
LINC01888-202ENST00000457602 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
LINC01888-202ENST00000457602 IDI1Q13907 227 aa12.66□□□□□ -0.38
LINC01888-202ENST00000457602 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
LINC01888-202ENST00000457602 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
LINC01888-202ENST00000457602 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
LINC01888-202ENST00000457602 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
LINC01888-202ENST00000457602 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
LINC01888-202ENST00000457602 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
LINC01888-202ENST00000457602 SYNMO15061 1565 aa12.64□□□□□ -0.39
LINC01888-202ENST00000457602 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
LINC01888-202ENST00000457602 EFCAB6Q5THR3 1501 aa12.63□□□□□ -0.39
LINC01888-202ENST00000457602 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
LINC01888-202ENST00000457602 BCANQ96GW7 911 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms