RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 KIAA1210Q9ULL0 1709 aa17.55■□□□□ 0.4
C9orf139-201ENST00000457302 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
C9orf139-201ENST00000457302 ASXL1Q8IXJ9 1541 aa17.55■□□□□ 0.4
C9orf139-201ENST00000457302 NALCNQ8IZF0 1738 aa17.54■□□□□ 0.4
C9orf139-201ENST00000457302 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
C9orf139-201ENST00000457302 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
C9orf139-201ENST00000457302 BRINP3Q76B58 766 aa17.53■□□□□ 0.4
C9orf139-201ENST00000457302 DLC1Q96QB1 1528 aa17.52■□□□□ 0.4
C9orf139-201ENST00000457302 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
C9orf139-201ENST00000457302 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
C9orf139-201ENST00000457302 MST1RQ04912 1400 aa17.52■□□□□ 0.4
C9orf139-201ENST00000457302 ADGRB1O14514 1584 aa17.52■□□□□ 0.39
C9orf139-201ENST00000457302 SOCS7O14512 581 aa17.51■□□□□ 0.39
C9orf139-201ENST00000457302 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
C9orf139-201ENST00000457302 ROCK2O75116 1388 aaKnown RBP17.5■□□□□ 0.39
C9orf139-201ENST00000457302 C1orf167Q5SNV9 1468 aa17.5■□□□□ 0.39
C9orf139-201ENST00000457302 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
C9orf139-201ENST00000457302 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
C9orf139-201ENST00000457302 PHLPP1O60346 1717 aa17.49■□□□□ 0.39
C9orf139-201ENST00000457302 LRRC59Q96AG4 307 aaKnown RBP17.48■□□□□ 0.39
C9orf139-201ENST00000457302 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
C9orf139-201ENST00000457302 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
C9orf139-201ENST00000457302 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
C9orf139-201ENST00000457302 EIF3AQ14152 1382 aaKnown RBP17.46■□□□□ 0.39
C9orf139-201ENST00000457302 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
C9orf139-201ENST00000457302 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.38
C9orf139-201ENST00000457302 NPHP3Q7Z494 1330 aa17.44■□□□□ 0.38
C9orf139-201ENST00000457302 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
C9orf139-201ENST00000457302 JCADQ9P266 1359 aa17.43■□□□□ 0.38
C9orf139-201ENST00000457302 FOXO3O43524 673 aa17.43■□□□□ 0.38
C9orf139-201ENST00000457302 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
C9orf139-201ENST00000457302 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
C9orf139-201ENST00000457302 PSME1Q06323 249 aa17.42■□□□□ 0.38
C9orf139-201ENST00000457302 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
C9orf139-201ENST00000457302 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
C9orf139-201ENST00000457302 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
C9orf139-201ENST00000457302 AHDC1Q5TGY3 1603 aaPredicted RBP17.41■□□□□ 0.38
C9orf139-201ENST00000457302 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
C9orf139-201ENST00000457302 SRPK2P78362 688 aaKnown RBP17.4■□□□□ 0.38
C9orf139-201ENST00000457302 RGPD8O14715 1765 aaPredicted RBP17.39■□□□□ 0.37
C9orf139-201ENST00000457302 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
C9orf139-201ENST00000457302 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
C9orf139-201ENST00000457302 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
C9orf139-201ENST00000457302 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
C9orf139-201ENST00000457302 PMFBP1Q8TBY8 1022 aa17.38■□□□□ 0.37
C9orf139-201ENST00000457302 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
C9orf139-201ENST00000457302 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
C9orf139-201ENST00000457302 NHSL1Q5SYE7 1610 aa17.37■□□□□ 0.37
C9orf139-201ENST00000457302 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
C9orf139-201ENST00000457302 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
C9orf139-201ENST00000457302 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
C9orf139-201ENST00000457302 ADGRB2O60241 1585 aa17.36■□□□□ 0.37
C9orf139-201ENST00000457302 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
C9orf139-201ENST00000457302 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
C9orf139-201ENST00000457302 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
C9orf139-201ENST00000457302 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
C9orf139-201ENST00000457302 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
C9orf139-201ENST00000457302 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
C9orf139-201ENST00000457302 NUTM2AQ8IVF1 878 aaPredicted RBP17.35■□□□□ 0.37
C9orf139-201ENST00000457302 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
C9orf139-201ENST00000457302 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
C9orf139-201ENST00000457302 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
C9orf139-201ENST00000457302 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
C9orf139-201ENST00000457302 CABP2Q9NPB3 220 aa17.33■□□□□ 0.36
C9orf139-201ENST00000457302 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
C9orf139-201ENST00000457302 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
C9orf139-201ENST00000457302 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
C9orf139-201ENST00000457302 SHPRHQ149N8 1683 aa17.3■□□□□ 0.36
C9orf139-201ENST00000457302 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
C9orf139-201ENST00000457302 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
C9orf139-201ENST00000457302 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
C9orf139-201ENST00000457302 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
C9orf139-201ENST00000457302 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
C9orf139-201ENST00000457302 PLEKHG3A1L390 1219 aa17.28■□□□□ 0.36
C9orf139-201ENST00000457302 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
C9orf139-201ENST00000457302 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
C9orf139-201ENST00000457302 ACEP12821 1306 aa17.26■□□□□ 0.35
C9orf139-201ENST00000457302 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
C9orf139-201ENST00000457302 SBNO1A3KN83 1393 aa17.26■□□□□ 0.35
C9orf139-201ENST00000457302 PXDNQ92626 1479 aa17.25■□□□□ 0.35
C9orf139-201ENST00000457302 ADAMTS2O95450 1211 aa17.25■□□□□ 0.35
C9orf139-201ENST00000457302 ATP7BP35670 1465 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 TMC1Q8TDI8 760 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
C9orf139-201ENST00000457302 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
C9orf139-201ENST00000457302 TMF1P82094 1093 aa17.23■□□□□ 0.35
C9orf139-201ENST00000457302 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
C9orf139-201ENST00000457302 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
C9orf139-201ENST00000457302 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
C9orf139-201ENST00000457302 USP47Q96K76 1375 aa17.23■□□□□ 0.35
C9orf139-201ENST00000457302 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
C9orf139-201ENST00000457302 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
C9orf139-201ENST00000457302 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
C9orf139-201ENST00000457302 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf139-201ENST00000457302 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
C9orf139-201ENST00000457302 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms