RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 HIP1O00291 1037 aa10.31□□□□□ -0.76
NEDD4L-209ENST00000456986 PDCP20941 246 aa10.31□□□□□ -0.76
NEDD4L-209ENST00000456986 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
NEDD4L-209ENST00000456986 EXOC6Q8TAG9 804 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 ZNF771Q7L3S4 317 aaPredicted RBP10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 CCDC39Q9UFE4 941 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 CCP110O43303 1012 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 DCTN1Q14203 1278 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 C1orf141Q5JVX7 400 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 C22orf23Q9BZE7 217 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 APBB1O00213 710 aa10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 RDXP35241 583 aaKnown RBP10.3□□□□□ -0.76
NEDD4L-209ENST00000456986 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 ZRSR2Q15696 482 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 SLC4A10Q6U841 1118 aa10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 HMGN5P82970 282 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 CWC22Q9HCG8 908 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 ACBD3Q9H3P7 528 aa10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 FAM43AQ8N2R8 423 aa10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
NEDD4L-209ENST00000456986 ARGLU1Q9NWB6 273 aaPredicted RBP10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 PSMA5P28066 241 aa10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 AKAP17AQ02040 695 aaKnown RBP10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 CDC45O75419 566 aa10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 RABEP1Q15276 862 aa10.28□□□□□ -0.76
NEDD4L-209ENST00000456986 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 TRIM29Q14134 588 aa10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 TPD52L1Q16890 204 aaPredicted RBP10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 WDR63Q8IWG1 891 aa10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 CCDC47Q96A33 483 aaKnown RBP10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.76
NEDD4L-209ENST00000456986 RASSF8Q8NHQ8 419 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 TRAK1Q9UPV9 953 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 ANKRD30BQ9BXX2 1392 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 KIF1BO60333 1816 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.77
NEDD4L-209ENST00000456986 APAF1O14727 1248 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 NASPP49321 788 aaPredicted RBP10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 AK7Q96M32 723 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 C9orf78Q9NZ63 289 aaPredicted RBP10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 KIAA0586Q9BVV6 1533 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 AMOTL1Q8IY63 956 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 RILPL2Q969X0 211 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 RIPK4P57078 832 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.26□□□□□ -0.771e-7■■■■■ 139.3
NEDD4L-209ENST00000456986 CHMP3Q9Y3E7 222 aa10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
NEDD4L-209ENST00000456986 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 NAIPQ13075 1403 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 TEFQ10587 303 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 CAVIN1Q6NZI2 390 aaKnown RBP10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
NEDD4L-209ENST00000456986 TRDNQ13061 729 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 NKTRP30414 1462 aaKnown RBP10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■■■□□ 16.9
NEDD4L-209ENST00000456986 SRCIN1Q9C0H9 1055 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 RUFY1Q96T51 708 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 SENP3Q9H4L4 574 aaPredicted RBP10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 SMC3Q9UQE7 1217 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 SOX12O15370 315 aa10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
NEDD4L-209ENST00000456986 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 GNAI3P08754 354 aa10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 CREBRFQ8IUR6 639 aa10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 RPRD2Q5VT52 1461 aaKnown RBP10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 ANKRD1Q15327 319 aa10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
NEDD4L-209ENST00000456986 PLEKHH1Q9ULM0 1364 aa10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 DYDC1Q8WWB3 177 aa10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 CCDC73Q6ZRK6 1079 aa10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 PLIN1O60240 522 aa10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 G3BP1Q13283 466 aaKnown RBP eCLIP10.22□□□□□ -0.771e-6■□□□□ 10.7
NEDD4L-209ENST00000456986 SAFBQ15424 915 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEDD4L-209ENST00000456986 MLECQ14165 292 aa10.21□□□□□ -0.77
NEDD4L-209ENST00000456986 ABCC11Q96J66 1382 aa10.21□□□□□ -0.77
NEDD4L-209ENST00000456986 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.77
NEDD4L-209ENST00000456986 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
NEDD4L-209ENST00000456986 PLEKHG5O94827 1062 aa10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 INCENPQ9NQS7 918 aa10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 CPLX1O14810 134 aa10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 BACH2Q9BYV9 841 aa10.21□□□□□ -0.78
NEDD4L-209ENST00000456986 MARCH6O60337 910 aa10.2□□□□□ -0.78
NEDD4L-209ENST00000456986 XBP1P17861 261 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms