RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 MS4A1P11836 297 aa26.34■■□□□ 1.81
CSPG5-203ENST00000456150 ESF1Q9H501 851 aaKnown RBP26.34■■□□□ 1.81
CSPG5-203ENST00000456150 NSD3Q9BZ95 1437 aa26.33■■□□□ 1.81
CSPG5-203ENST00000456150 NEXMIFQ5QGS0 1516 aa26.33■■□□□ 1.81
CSPG5-203ENST00000456150 ZMYM3Q14202 1370 aa26.32■■□□□ 1.8
CSPG5-203ENST00000456150 CCDC146Q8IYE0 955 aa26.32■■□□□ 1.8
CSPG5-203ENST00000456150 NOP58Q9Y2X3 529 aaKnown RBP26.32■■□□□ 1.8
CSPG5-203ENST00000456150 VGFO15240 615 aaPredicted RBP26.31■■□□□ 1.8
CSPG5-203ENST00000456150 TRMT2AQ8IZ69 625 aaKnown RBP26.31■■□□□ 1.8
CSPG5-203ENST00000456150 SLC52A1Q9NWF4 448 aa26.31■■□□□ 1.8
CSPG5-203ENST00000456150 ARHGEF28Q8N1W1 1705 aaKnown RBP26.31■■□□□ 1.8
CSPG5-203ENST00000456150 APAF1O14727 1248 aa26.3■■□□□ 1.8
CSPG5-203ENST00000456150 PUS7Q96PZ0 661 aaKnown RBP26.3■■□□□ 1.8
CSPG5-203ENST00000456150 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
CSPG5-203ENST00000456150 NKTRP30414 1462 aaKnown RBP26.28■■□□□ 1.8
CSPG5-203ENST00000456150 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
CSPG5-203ENST00000456150 IPO9Q96P70 1041 aaKnown RBP26.27■■□□□ 1.8
CSPG5-203ENST00000456150 MYO5BQ9ULV0 1848 aa26.26■■□□□ 1.79
CSPG5-203ENST00000456150 E9PSI1 815 aa26.26■■□□□ 1.79
CSPG5-203ENST00000456150 MORC1Q86VD1 984 aa26.26■■□□□ 1.79
CSPG5-203ENST00000456150 TMEM131LA2VDJ0 1609 aa26.26■■□□□ 1.79
CSPG5-203ENST00000456150 NUTM2DQ5VT03 806 aaPredicted RBP26.26■■□□□ 1.79
CSPG5-203ENST00000456150 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
CSPG5-203ENST00000456150 C20orf194Q5TEA3 1177 aa26.25■■□□□ 1.79
CSPG5-203ENST00000456150 SLC12A5Q9H2X9 1139 aa26.24■■□□□ 1.79
CSPG5-203ENST00000456150 ZFYVE9O95405 1425 aa26.24■■□□□ 1.79
CSPG5-203ENST00000456150 EVC2Q86UK5 1308 aa26.24■■□□□ 1.79
CSPG5-203ENST00000456150 CGNL1Q0VF96 1302 aa26.22■■□□□ 1.79
CSPG5-203ENST00000456150 PDE4AP27815 886 aa26.22■■□□□ 1.79
CSPG5-203ENST00000456150 TULP4Q9NRJ4 1543 aa26.22■■□□□ 1.79
CSPG5-203ENST00000456150 BACH2Q9BYV9 841 aa26.2■■□□□ 1.78
CSPG5-203ENST00000456150 NSD2O96028 1365 aa26.2■■□□□ 1.78
CSPG5-203ENST00000456150 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
CSPG5-203ENST00000456150 CENPQQ7L2Z9 268 aaPredicted RBP26.19■■□□□ 1.78
CSPG5-203ENST00000456150 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
CSPG5-203ENST00000456150 KDM2BQ8NHM5 1336 aa26.18■■□□□ 1.78
CSPG5-203ENST00000456150 SPINK5Q9NQ38 1064 aaPredicted RBP26.17■■□□□ 1.78
CSPG5-203ENST00000456150 FER1L4A9Z1Z3 1794 aa26.16■■□□□ 1.78
CSPG5-203ENST00000456150 ZBTB47Q9UFB7 747 aaPredicted RBP26.16■■□□□ 1.78
CSPG5-203ENST00000456150 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
CSPG5-203ENST00000456150 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
CSPG5-203ENST00000456150 CFAP53Q96M91 514 aa26.15■■□□□ 1.78
CSPG5-203ENST00000456150 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
CSPG5-203ENST00000456150 NINLQ9Y2I6 1382 aa26.14■■□□□ 1.78
CSPG5-203ENST00000456150 PAK3O75914 559 aaPredicted RBP26.14■■□□□ 1.77
CSPG5-203ENST00000456150 RUNDC1Q96C34 613 aa26.14■■□□□ 1.77
CSPG5-203ENST00000456150 TNRQ92752 1358 aa26.14■■□□□ 1.77
CSPG5-203ENST00000456150 A2ML1A8K2U0 1454 aa26.13■■□□□ 1.77
CSPG5-203ENST00000456150 WWC1Q8IX03 1113 aa26.13■■□□□ 1.77
CSPG5-203ENST00000456150 C3P01024 1663 aa26.12■■□□□ 1.77
CSPG5-203ENST00000456150 IQSEC2Q5JU85 1478 aa26.12■■□□□ 1.77
CSPG5-203ENST00000456150 TNNT2P45379 298 aaPredicted RBP26.11■■□□□ 1.77
CSPG5-203ENST00000456150 MTHFSP49914 203 aa26.08■■□□□ 1.77
CSPG5-203ENST00000456150 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
CSPG5-203ENST00000456150 BCAR3O75815 825 aa26.07■■□□□ 1.76
CSPG5-203ENST00000456150 NPM2Q86SE8 214 aaKnown RBP26.06■■□□□ 1.76
CSPG5-203ENST00000456150 CABP2Q9NPB3 220 aa26.06■■□□□ 1.76
CSPG5-203ENST00000456150 NCBP3Q53F19 620 aaKnown RBP26.05■■□□□ 1.76
CSPG5-203ENST00000456150 PTPRMP28827 1452 aa26.05■■□□□ 1.76
CSPG5-203ENST00000456150 PDE3AQ14432 1141 aa26.04■■□□□ 1.76
CSPG5-203ENST00000456150 WDR63Q8IWG1 891 aa26.04■■□□□ 1.76
CSPG5-203ENST00000456150 TCP11L2Q8N4U5 519 aa26.04■■□□□ 1.76
CSPG5-203ENST00000456150 ABCC11Q96J66 1382 aa26.04■■□□□ 1.76
CSPG5-203ENST00000456150 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
CSPG5-203ENST00000456150 ATAD2Q6PL18 1390 aa26.03■■□□□ 1.76
CSPG5-203ENST00000456150 CCDC27Q2M243 656 aa26.03■■□□□ 1.76
CSPG5-203ENST00000456150 RIMS2Q9UQ26 1411 aa26.02■■□□□ 1.76
CSPG5-203ENST00000456150 STK26Q9P289 416 aa26.02■■□□□ 1.76
CSPG5-203ENST00000456150 ANKRD26Q9UPS8 1709 aa26.01■■□□□ 1.76
CSPG5-203ENST00000456150 A0A1W2PP64 1363 aa26.01■■□□□ 1.75
CSPG5-203ENST00000456150 RIMS1Q86UR5 1692 aaKnown RBP26.01■■□□□ 1.75
CSPG5-203ENST00000456150 YTHDC2Q9H6S0 1430 aaKnown RBP26.01■■□□□ 1.75
CSPG5-203ENST00000456150 SRPK2P78362 688 aaKnown RBP26■■□□□ 1.75
CSPG5-203ENST00000456150 SAFB2Q14151 953 aaKnown RBP eCLIP26■■□□□ 1.75
CSPG5-203ENST00000456150 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
CSPG5-203ENST00000456150 SKAP1Q86WV1 359 aa25.99■■□□□ 1.75
CSPG5-203ENST00000456150 NEUROD2Q15784 382 aa25.99■■□□□ 1.75
CSPG5-203ENST00000456150 ADGRB2O60241 1585 aa25.99■■□□□ 1.75
CSPG5-203ENST00000456150 CANXP27824 592 aaKnown RBP25.98■■□□□ 1.75
CSPG5-203ENST00000456150 ALKQ9UM73 1620 aa25.98■■□□□ 1.75
CSPG5-203ENST00000456150 RRP7AQ9Y3A4 280 aaKnown RBP25.97■■□□□ 1.75
CSPG5-203ENST00000456150 ADAMTSL3P82987 1691 aa25.97■■□□□ 1.75
CSPG5-203ENST00000456150 MED14O60244 1454 aa25.97■■□□□ 1.75
CSPG5-203ENST00000456150 TERF2IPQ9NYB0 399 aa25.97■■□□□ 1.75
CSPG5-203ENST00000456150 NLRP1Q9C000 1473 aa25.96■■□□□ 1.75
CSPG5-203ENST00000456150 POGKQ9P215 609 aa25.95■■□□□ 1.75
CSPG5-203ENST00000456150 DDRGK1Q96HY6 314 aa25.95■■□□□ 1.74
CSPG5-203ENST00000456150 PRAM1Q96QH2 718 aa25.95■■□□□ 1.74
CSPG5-203ENST00000456150 U2AF1L5P0DN76 240 aaPredicted RBP25.94■■□□□ 1.74
CSPG5-203ENST00000456150 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.74
CSPG5-203ENST00000456150 FAM161AQ3B820 660 aa25.93■■□□□ 1.74
CSPG5-203ENST00000456150 MINK1Q8N4C8 1332 aaPredicted RBP25.93■■□□□ 1.74
CSPG5-203ENST00000456150 RARSP54136 660 aaKnown RBP25.92■■□□□ 1.74
CSPG5-203ENST00000456150 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
CSPG5-203ENST00000456150 AAMPQ13685 434 aa25.92■■□□□ 1.74
CSPG5-203ENST00000456150 NBR1Q14596 966 aa25.92■■□□□ 1.74
CSPG5-203ENST00000456150 TMEM2Q9UHN6 1383 aa25.91■■□□□ 1.74
CSPG5-203ENST00000456150 CD163L1Q9NR16 1453 aa25.9■■□□□ 1.74
CSPG5-203ENST00000456150 CLUAP1Q96AJ1 413 aa25.9■■□□□ 1.74
CSPG5-203ENST00000456150 COL3A1P02461 1466 aaPredicted RBP25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms