RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 MPHOSPH9Q99550 1183 aa25.04■■□□□ 1.6
TVP23A-202ENST00000456096 ESCO1Q5FWF5 840 aa25.03■■□□□ 1.6
TVP23A-202ENST00000456096 STK26Q9P289 416 aa25.03■■□□□ 1.6
TVP23A-202ENST00000456096 SPATA31E1Q6ZUB1 1445 aa25.03■■□□□ 1.6
TVP23A-202ENST00000456096 RGS12O14924 1447 aa25.02■■□□□ 1.6
TVP23A-202ENST00000456096 WAPLQ7Z5K2 1190 aa25.01■■□□□ 1.59
TVP23A-202ENST00000456096 CDC42BPGQ6DT37 1551 aa25.01■■□□□ 1.59
TVP23A-202ENST00000456096 ANKRD30BQ9BXX2 1392 aa24.99■■□□□ 1.59
TVP23A-202ENST00000456096 IFT172Q9UG01 1749 aa24.98■■□□□ 1.59
TVP23A-202ENST00000456096 NPHP3Q7Z494 1330 aa24.98■■□□□ 1.59
TVP23A-202ENST00000456096 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
TVP23A-202ENST00000456096 USP21Q9UK80 565 aa24.98■■□□□ 1.59
TVP23A-202ENST00000456096 TECPR2O15040 1411 aa24.97■■□□□ 1.59
TVP23A-202ENST00000456096 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
TVP23A-202ENST00000456096 NUTM2FA1L443 756 aa24.97■■□□□ 1.59
TVP23A-202ENST00000456096 FOXO3O43524 673 aa24.96■■□□□ 1.59
TVP23A-202ENST00000456096 XPCQ01831 940 aaPredicted RBP24.96■■□□□ 1.59
TVP23A-202ENST00000456096 FNBP4Q8N3X1 1017 aaPredicted RBP24.96■■□□□ 1.59
TVP23A-202ENST00000456096 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
TVP23A-202ENST00000456096 ABCC11Q96J66 1382 aa24.95■■□□□ 1.59
TVP23A-202ENST00000456096 PXDNQ92626 1479 aa24.95■■□□□ 1.58
TVP23A-202ENST00000456096 PLEKHH1Q9ULM0 1364 aa24.94■■□□□ 1.58
TVP23A-202ENST00000456096 TRPC5Q9UL62 973 aaPredicted RBP24.93■■□□□ 1.58
TVP23A-202ENST00000456096 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
TVP23A-202ENST00000456096 MYOM2P54296 1465 aa24.92■■□□□ 1.58
TVP23A-202ENST00000456096 KNDC1Q76NI1 1749 aa24.91■■□□□ 1.58
TVP23A-202ENST00000456096 YTHDC2Q9H6S0 1430 aaKnown RBP24.89■■□□□ 1.58
TVP23A-202ENST00000456096 ATRNO75882 1429 aa24.88■■□□□ 1.57
TVP23A-202ENST00000456096 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
TVP23A-202ENST00000456096 EP400Q96L91 3159 aa24.86■■□□□ 1.57
TVP23A-202ENST00000456096 C14orf93Q9H972 538 aaKnown RBP24.86■■□□□ 1.57
TVP23A-202ENST00000456096 MARF1Q9Y4F3 1742 aaKnown RBP24.86■■□□□ 1.57
TVP23A-202ENST00000456096 BCL9LQ86UU0 1499 aa24.85■■□□□ 1.57
TVP23A-202ENST00000456096 ATAD2Q6PL18 1390 aa24.85■■□□□ 1.57
TVP23A-202ENST00000456096 SIRT1Q96EB6 747 aa24.85■■□□□ 1.57
TVP23A-202ENST00000456096 SRCAPQ6ZRS2 3230 aa24.83■■□□□ 1.57
TVP23A-202ENST00000456096 CFAP70Q5T0N1 1121 aa24.83■■□□□ 1.57
TVP23A-202ENST00000456096 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.56
TVP23A-202ENST00000456096 SPATA31A3Q5VYP0 1347 aa24.82■■□□□ 1.56
TVP23A-202ENST00000456096 KRT28Q7Z3Y7 464 aa24.81■■□□□ 1.56
TVP23A-202ENST00000456096 NRXN1Q9ULB1 1477 aa24.81■■□□□ 1.56
TVP23A-202ENST00000456096 KIF1AQ12756 1690 aa24.8■■□□□ 1.56
TVP23A-202ENST00000456096 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
TVP23A-202ENST00000456096 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
TVP23A-202ENST00000456096 GJD4Q96KN9 370 aaPredicted RBP24.78■■□□□ 1.56
TVP23A-202ENST00000456096 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
TVP23A-202ENST00000456096 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
TVP23A-202ENST00000456096 PRAM1Q96QH2 718 aa24.76■■□□□ 1.55
TVP23A-202ENST00000456096 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
TVP23A-202ENST00000456096 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
TVP23A-202ENST00000456096 PSME1Q06323 249 aa24.73■■□□□ 1.55
TVP23A-202ENST00000456096 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.72■■□□□ 1.55
TVP23A-202ENST00000456096 SLIT2O94813 1529 aa24.72■■□□□ 1.55
TVP23A-202ENST00000456096 TNS3Q68CZ2 1445 aa24.71■■□□□ 1.55
TVP23A-202ENST00000456096 PLEKHG5O94827 1062 aa24.71■■□□□ 1.55
TVP23A-202ENST00000456096 CABLES1Q8TDN4 633 aa24.71■■□□□ 1.55
TVP23A-202ENST00000456096 POGKQ9P215 609 aa24.71■■□□□ 1.55
TVP23A-202ENST00000456096 USP32Q8NFA0 1604 aa24.71■■□□□ 1.55
TVP23A-202ENST00000456096 RALGAPBQ86X10 1494 aa24.7■■□□□ 1.54
TVP23A-202ENST00000456096 HAP1P54257 671 aaPredicted RBP24.69■■□□□ 1.54
TVP23A-202ENST00000456096 GLI3P10071 1580 aa24.68■■□□□ 1.54
TVP23A-202ENST00000456096 DLC1Q96QB1 1528 aa24.68■■□□□ 1.54
TVP23A-202ENST00000456096 LMOD2Q6P5Q4 547 aa24.68■■□□□ 1.54
TVP23A-202ENST00000456096 SBNO1A3KN83 1393 aa24.67■■□□□ 1.54
TVP23A-202ENST00000456096 CCDC125Q86Z20 511 aa24.67■■□□□ 1.54
TVP23A-202ENST00000456096 PMFBP1Q8TBY8 1022 aa24.67■■□□□ 1.54
TVP23A-202ENST00000456096 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
TVP23A-202ENST00000456096 ADGRB1O14514 1584 aa24.66■■□□□ 1.54
TVP23A-202ENST00000456096 KDM2AQ9Y2K7 1162 aa24.65■■□□□ 1.54
TVP23A-202ENST00000456096 HIRIP3Q9BW71 556 aaPredicted RBP24.64■■□□□ 1.54
TVP23A-202ENST00000456096 ANKARQ7Z5J8 1434 aa24.63■■□□□ 1.53
TVP23A-202ENST00000456096 ARHGEF10O15013 1369 aa24.63■■□□□ 1.53
TVP23A-202ENST00000456096 VPS72Q15906 364 aa24.62■■□□□ 1.53
TVP23A-202ENST00000456096 DCAF11Q8TEB1 546 aa24.62■■□□□ 1.53
TVP23A-202ENST00000456096 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
TVP23A-202ENST00000456096 ADGRB2O60241 1585 aa24.62■■□□□ 1.53
TVP23A-202ENST00000456096 BRWD3Q6RI45 1802 aa24.61■■□□□ 1.53
TVP23A-202ENST00000456096 ABCA3Q99758 1704 aa24.61■■□□□ 1.53
TVP23A-202ENST00000456096 MINK1Q8N4C8 1332 aaPredicted RBP24.61■■□□□ 1.53
TVP23A-202ENST00000456096 PLCH1Q4KWH8 1693 aa24.6■■□□□ 1.53
TVP23A-202ENST00000456096 NWD2Q9ULI1 1742 aa24.59■■□□□ 1.53
TVP23A-202ENST00000456096 FAM83GA6ND36 823 aa24.59■■□□□ 1.53
TVP23A-202ENST00000456096 SEPT12Q8IYM1 358 aa24.59■■□□□ 1.53
TVP23A-202ENST00000456096 CCDC9Q9Y3X0 531 aaKnown RBP24.58■■□□□ 1.53
TVP23A-202ENST00000456096 PRR36Q9H6K5 1346 aa24.58■■□□□ 1.52
TVP23A-202ENST00000456096 ONECUT3O60422 494 aaPredicted RBP24.56■■□□□ 1.52
TVP23A-202ENST00000456096 TRPM3Q9HCF6 1732 aaPredicted RBP24.55■■□□□ 1.52
TVP23A-202ENST00000456096 BLMP54132 1417 aaPredicted RBP24.55■■□□□ 1.52
TVP23A-202ENST00000456096 WASLO00401 505 aaPredicted RBP24.55■■□□□ 1.52
TVP23A-202ENST00000456096 GPRASP1Q5JY77 1395 aa24.54■■□□□ 1.52
TVP23A-202ENST00000456096 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
TVP23A-202ENST00000456096 TULP4Q9NRJ4 1543 aa24.53■■□□□ 1.52
TVP23A-202ENST00000456096 STAC3Q96MF2 364 aa24.53■■□□□ 1.52
TVP23A-202ENST00000456096 ALS2Q96Q42 1657 aa24.52■■□□□ 1.52
TVP23A-202ENST00000456096 DEFB132Q7Z7B7 95 aa24.51■■□□□ 1.51
TVP23A-202ENST00000456096 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
TVP23A-202ENST00000456096 HRCP23327 699 aa24.5■■□□□ 1.51
TVP23A-202ENST00000456096 KRT27Q7Z3Y8 459 aa24.5■■□□□ 1.51
TVP23A-202ENST00000456096 NGDNQ8NEJ9 315 aaKnown RBP24.5■■□□□ 1.51
TVP23A-202ENST00000456096 SF3B2Q13435 895 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms