RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ATP13A2Q9NQ11 1180 aa9.37□□□□□ -0.91
R3HDM1-212ENST00000456040 SLC27A5Q9Y2P5 690 aa9.37□□□□□ -0.91
R3HDM1-212ENST00000456040 WNT7AO00755 349 aa9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 SLC16A10Q8TF71 515 aa9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-212ENST00000456040 FECHP22830 423 aa9.35□□□□□ -0.91
R3HDM1-212ENST00000456040 Q3C1V9 767 aa9.35□□□□□ -0.91
R3HDM1-212ENST00000456040 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
R3HDM1-212ENST00000456040 GCGRP47871 477 aa9.34□□□□□ -0.91
R3HDM1-212ENST00000456040 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
R3HDM1-212ENST00000456040 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
R3HDM1-212ENST00000456040 TRIM47Q96LD4 638 aa9.33□□□□□ -0.92
R3HDM1-212ENST00000456040 GNPATO15228 680 aa9.32□□□□□ -0.92
R3HDM1-212ENST00000456040 SMPD1P17405 629 aa9.32□□□□□ -0.92
R3HDM1-212ENST00000456040 TRIM32Q13049 653 aa9.32□□□□□ -0.92
R3HDM1-212ENST00000456040 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
R3HDM1-212ENST00000456040 PRDM9Q9NQV7 894 aa9.31□□□□□ -0.92
R3HDM1-212ENST00000456040 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
R3HDM1-212ENST00000456040 MRGPRX2Q96LB1 330 aa9.3□□□□□ -0.92
R3HDM1-212ENST00000456040 J3QL48 77 aa9.27□□□□□ -0.93
R3HDM1-212ENST00000456040 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.93
R3HDM1-212ENST00000456040 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
R3HDM1-212ENST00000456040 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
R3HDM1-212ENST00000456040 MMP16P51512 607 aa9.24□□□□□ -0.93
R3HDM1-212ENST00000456040 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
R3HDM1-212ENST00000456040 HPS1Q92902 700 aa9.24□□□□□ -0.93
R3HDM1-212ENST00000456040 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
R3HDM1-212ENST00000456040 WNT7BP56706 349 aa9.23□□□□□ -0.93
R3HDM1-212ENST00000456040 RC3H1Q5TC82 1133 aaKnown RBP9.23□□□□□ -0.93
R3HDM1-212ENST00000456040 IRF7Q92985 503 aa9.22□□□□□ -0.93
R3HDM1-212ENST00000456040 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
R3HDM1-212ENST00000456040 ALDH1A1P00352 501 aa9.21□□□□□ -0.94
R3HDM1-212ENST00000456040 NPAS3Q8IXF0 933 aa9.21□□□□□ -0.94
R3HDM1-212ENST00000456040 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
R3HDM1-212ENST00000456040 NLRP7Q8WX94 980 aa9.21□□□□□ -0.94
R3HDM1-212ENST00000456040 DXOO77932 396 aaKnown RBP9.19□□□□□ -0.94
R3HDM1-212ENST00000456040 WASF2Q9Y6W5 498 aa9.19□□□□□ -0.94
R3HDM1-212ENST00000456040 KDM4AO75164 1064 aa9.18□□□□□ -0.94
R3HDM1-212ENST00000456040 USP46P62068 366 aa9.17□□□□□ -0.94
R3HDM1-212ENST00000456040 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
R3HDM1-212ENST00000456040 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
R3HDM1-212ENST00000456040 GMPRP36959 345 aa9.15□□□□□ -0.94
R3HDM1-212ENST00000456040 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
R3HDM1-212ENST00000456040 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
R3HDM1-212ENST00000456040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
R3HDM1-212ENST00000456040 GPR37O15354 613 aa9.12□□□□□ -0.95
R3HDM1-212ENST00000456040 CD46P15529 392 aa9.12□□□□□ -0.95
R3HDM1-212ENST00000456040 SKOR1P84550 965 aa9.12□□□□□ -0.95
R3HDM1-212ENST00000456040 PHOX2BQ99453 314 aa9.12□□□□□ -0.95
R3HDM1-212ENST00000456040 JUNDP17535 347 aa9.1□□□□□ -0.95
R3HDM1-212ENST00000456040 H3BM21 787 aa9.09□□□□□ -0.95
R3HDM1-212ENST00000456040 BMP1P13497 986 aa9.08□□□□□ -0.96
R3HDM1-212ENST00000456040 SCARF1Q14162 830 aa9.08□□□□□ -0.96
R3HDM1-212ENST00000456040 NUDT12Q9BQG2 462 aa9.08□□□□□ -0.96
R3HDM1-212ENST00000456040 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
R3HDM1-212ENST00000456040 VEGFBP49765 207 aa9.07□□□□□ -0.96
R3HDM1-212ENST00000456040 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
R3HDM1-212ENST00000456040 BCANQ96GW7 911 aa9.06□□□□□ -0.96
R3HDM1-212ENST00000456040 SIAH2O43255 324 aa9.05□□□□□ -0.96
R3HDM1-212ENST00000456040 HOXA2O43364 376 aa9.05□□□□□ -0.96
R3HDM1-212ENST00000456040 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
R3HDM1-212ENST00000456040 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
R3HDM1-212ENST00000456040 KRI1Q8N9T8 703 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-212ENST00000456040 ZFP42Q96MM3 310 aa9.04□□□□□ -0.96
R3HDM1-212ENST00000456040 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-212ENST00000456040 MAP2K5Q13163 448 aa9.02□□□□□ -0.97
R3HDM1-212ENST00000456040 MS4A1P11836 297 aa9.01□□□□□ -0.97
R3HDM1-212ENST00000456040 HLA-CQ95604 372 aa9.01□□□□□ -0.97
R3HDM1-212ENST00000456040 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
R3HDM1-212ENST00000456040 SH3BP2P78314 561 aa9□□□□□ -0.97
R3HDM1-212ENST00000456040 ERBB4Q15303 1308 aa9□□□□□ -0.97
R3HDM1-212ENST00000456040 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
R3HDM1-212ENST00000456040 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 IRF6O14896 467 aa8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 PTCRAQ6ISU1 281 aaPredicted RBP8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 SYMPKQ92797 1274 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-212ENST00000456040 LOC100996750A0A140TA64 210 aa8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 VARSP26640 1264 aaKnown RBP8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 CLCN1P35523 988 aa8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 KRTAP4-6Q9BYQ5 205 aa8.98□□□□□ -0.97
R3HDM1-212ENST00000456040 NNTQ13423 1086 aa8.97□□□□□ -0.97
R3HDM1-212ENST00000456040 ZMYND10O75800 440 aa8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 FDX1P10109 184 aa8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 UNC93B1Q9H1C4 597 aa8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 GPCPD1Q9NPB8 672 aa8.96□□□□□ -0.98
R3HDM1-212ENST00000456040 MAN1A2O60476 641 aa8.95□□□□□ -0.98
R3HDM1-212ENST00000456040 ADH1CP00326 375 aa8.95□□□□□ -0.98
R3HDM1-212ENST00000456040 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
R3HDM1-212ENST00000456040 PTPRNQ16849 979 aa8.95□□□□□ -0.98
R3HDM1-212ENST00000456040 MPNDQ8N594 471 aa8.95□□□□□ -0.98
R3HDM1-212ENST00000456040 EVA1BQ9NVM1 165 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms