RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
PDGFB-204ENST00000455790 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-204ENST00000455790 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
PDGFB-204ENST00000455790 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
PDGFB-204ENST00000455790 LRRC59Q96AG4 307 aaKnown RBP17.61■□□□□ 0.41
PDGFB-204ENST00000455790 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
PDGFB-204ENST00000455790 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
PDGFB-204ENST00000455790 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
PDGFB-204ENST00000455790 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
PDGFB-204ENST00000455790 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 HRCP23327 699 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
PDGFB-204ENST00000455790 PXDNQ92626 1479 aa17.56■□□□□ 0.4
PDGFB-204ENST00000455790 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 AFF2P51816 1311 aa17.55■□□□□ 0.4
PDGFB-204ENST00000455790 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-204ENST00000455790 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDGFB-204ENST00000455790 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
PDGFB-204ENST00000455790 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-204ENST00000455790 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 FOXO3O43524 673 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
PDGFB-204ENST00000455790 KIF1AQ12756 1690 aa17.49■□□□□ 0.39
PDGFB-204ENST00000455790 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
PDGFB-204ENST00000455790 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-204ENST00000455790 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
PDGFB-204ENST00000455790 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
PDGFB-204ENST00000455790 RXRBP28702 533 aa17.46■□□□□ 0.39
PDGFB-204ENST00000455790 POGKQ9P215 609 aa17.46■□□□□ 0.39
PDGFB-204ENST00000455790 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
PDGFB-204ENST00000455790 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
PDGFB-204ENST00000455790 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
PDGFB-204ENST00000455790 RGS12O14924 1447 aa17.44■□□□□ 0.38
PDGFB-204ENST00000455790 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
PDGFB-204ENST00000455790 ARHGEF28Q8N1W1 1705 aaKnown RBP17.43■□□□□ 0.38
PDGFB-204ENST00000455790 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
PDGFB-204ENST00000455790 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-204ENST00000455790 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
PDGFB-204ENST00000455790 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
PDGFB-204ENST00000455790 QTRT2Q9H974 415 aaKnown RBP17.42■□□□□ 0.38
PDGFB-204ENST00000455790 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 PRR36Q9H6K5 1346 aa17.41■□□□□ 0.38
PDGFB-204ENST00000455790 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
PDGFB-204ENST00000455790 USP21Q9UK80 565 aa17.4■□□□□ 0.38
PDGFB-204ENST00000455790 MARF1Q9Y4F3 1742 aaKnown RBP17.4■□□□□ 0.38
PDGFB-204ENST00000455790 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
PDGFB-204ENST00000455790 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
PDGFB-204ENST00000455790 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
PDGFB-204ENST00000455790 ATRNO75882 1429 aa17.38■□□□□ 0.37
PDGFB-204ENST00000455790 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
PDGFB-204ENST00000455790 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
PDGFB-204ENST00000455790 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 KIAA1210Q9ULL0 1709 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-204ENST00000455790 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
PDGFB-204ENST00000455790 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDGFB-204ENST00000455790 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 CABLES1Q8TDN4 633 aa17.35■□□□□ 0.37
PDGFB-204ENST00000455790 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 EIF3AQ14152 1382 aaKnown RBP17.35■□□□□ 0.37
PDGFB-204ENST00000455790 ATP7BP35670 1465 aa17.35■□□□□ 0.37
PDGFB-204ENST00000455790 NBPF1Q3BBV0 1214 aa17.34■□□□□ 0.37
PDGFB-204ENST00000455790 SLIT2O94813 1529 aa17.33■□□□□ 0.37
PDGFB-204ENST00000455790 PSME1Q06323 249 aa17.33■□□□□ 0.36
PDGFB-204ENST00000455790 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
PDGFB-204ENST00000455790 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
PDGFB-204ENST00000455790 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.31■□□□□ 0.36
PDGFB-204ENST00000455790 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
PDGFB-204ENST00000455790 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
PDGFB-204ENST00000455790 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
PDGFB-204ENST00000455790 EP400Q96L91 3159 aa17.3■□□□□ 0.36
PDGFB-204ENST00000455790 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 GLI3P10071 1580 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 ITSN1Q15811 1721 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
PDGFB-204ENST00000455790 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
PDGFB-204ENST00000455790 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
PDGFB-204ENST00000455790 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
PDGFB-204ENST00000455790 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
PDGFB-204ENST00000455790 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
PDGFB-204ENST00000455790 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
PDGFB-204ENST00000455790 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
PDGFB-204ENST00000455790 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
PDGFB-204ENST00000455790 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
PDGFB-204ENST00000455790 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
PDGFB-204ENST00000455790 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
PDGFB-204ENST00000455790 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
PDGFB-204ENST00000455790 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
PDGFB-204ENST00000455790 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms