RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ZNF335Q9H4Z2 1342 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-206ENST00000454852 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.11
TRAF4-206ENST00000454852 TULP4Q9NRJ4 1543 aa15.77■□□□□ 0.11
TRAF4-206ENST00000454852 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.11
TRAF4-206ENST00000454852 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
TRAF4-206ENST00000454852 NALCNQ8IZF0 1738 aa15.76■□□□□ 0.11
TRAF4-206ENST00000454852 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-206ENST00000454852 TMF1P82094 1093 aa15.75■□□□□ 0.11
TRAF4-206ENST00000454852 XIRP1Q702N8 1843 aaKnown RBP15.74■□□□□ 0.11
TRAF4-206ENST00000454852 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
TRAF4-206ENST00000454852 DCCP43146 1447 aa15.74■□□□□ 0.11
TRAF4-206ENST00000454852 TMEM94Q12767 1356 aa15.74■□□□□ 0.11
TRAF4-206ENST00000454852 DISP3Q9P2K9 1392 aa15.74■□□□□ 0.11
TRAF4-206ENST00000454852 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
TRAF4-206ENST00000454852 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-206ENST00000454852 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
TRAF4-206ENST00000454852 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-206ENST00000454852 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-206ENST00000454852 CCDC7Q96M83 1385 aa15.71■□□□□ 0.11
TRAF4-206ENST00000454852 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.1
TRAF4-206ENST00000454852 KIF7Q2M1P5 1343 aa15.7■□□□□ 0.1
TRAF4-206ENST00000454852 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
TRAF4-206ENST00000454852 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-206ENST00000454852 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRAF4-206ENST00000454852 C19orf44Q9H6X5 657 aa15.7■□□□□ 0.1
TRAF4-206ENST00000454852 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
TRAF4-206ENST00000454852 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
TRAF4-206ENST00000454852 ATAD2Q6PL18 1390 aa15.68■□□□□ 0.1
TRAF4-206ENST00000454852 CDK19Q9BWU1 502 aa15.68■□□□□ 0.1
TRAF4-206ENST00000454852 ATP7BP35670 1465 aa15.67■□□□□ 0.1
TRAF4-206ENST00000454852 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
TRAF4-206ENST00000454852 USP32Q8NFA0 1604 aa15.67■□□□□ 0.1
TRAF4-206ENST00000454852 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
TRAF4-206ENST00000454852 MYOM1P52179 1685 aa15.66■□□□□ 0.1
TRAF4-206ENST00000454852 MSH6P52701 1360 aa15.65■□□□□ 0.1
TRAF4-206ENST00000454852 ITSN1Q15811 1721 aa15.64■□□□□ 0.09
TRAF4-206ENST00000454852 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
TRAF4-206ENST00000454852 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
TRAF4-206ENST00000454852 RBM33Q96EV2 1170 aaKnown RBP15.63■□□□□ 0.09
TRAF4-206ENST00000454852 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
TRAF4-206ENST00000454852 PRR36Q9H6K5 1346 aa15.63■□□□□ 0.09
TRAF4-206ENST00000454852 MST1RQ04912 1400 aa15.62■□□□□ 0.09
TRAF4-206ENST00000454852 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
TRAF4-206ENST00000454852 NUDT16Q96DE0 195 aaKnown RBP15.62■□□□□ 0.09
TRAF4-206ENST00000454852 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
TRAF4-206ENST00000454852 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
TRAF4-206ENST00000454852 ATF3P18847 181 aa15.6■□□□□ 0.09
TRAF4-206ENST00000454852 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
TRAF4-206ENST00000454852 PPIP5K1Q6PFW1 1433 aa15.59■□□□□ 0.09
TRAF4-206ENST00000454852 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
TRAF4-206ENST00000454852 RGPD8O14715 1765 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-206ENST00000454852 POLR3AO14802 1390 aaPredicted RBP15.58■□□□□ 0.08
TRAF4-206ENST00000454852 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.08
TRAF4-206ENST00000454852 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
TRAF4-206ENST00000454852 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
TRAF4-206ENST00000454852 AKAP12Q02952 1782 aa15.56■□□□□ 0.08
TRAF4-206ENST00000454852 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
TRAF4-206ENST00000454852 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
TRAF4-206ENST00000454852 MON2Q7Z3U7 1717 aa15.54■□□□□ 0.08
TRAF4-206ENST00000454852 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-206ENST00000454852 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
TRAF4-206ENST00000454852 A0A1W2PP64 1363 aa15.53■□□□□ 0.08
TRAF4-206ENST00000454852 CERKQ8TCT0 537 aa15.53■□□□□ 0.08
TRAF4-206ENST00000454852 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-206ENST00000454852 SLAIN2Q9P270 581 aa15.53■□□□□ 0.08
TRAF4-206ENST00000454852 PER1O15534 1290 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-206ENST00000454852 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.08
TRAF4-206ENST00000454852 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
TRAF4-206ENST00000454852 POLR3GLQ9BT43 218 aa15.52■□□□□ 0.08
TRAF4-206ENST00000454852 PANK3Q9H999 370 aa15.52■□□□□ 0.08
TRAF4-206ENST00000454852 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
TRAF4-206ENST00000454852 SSH2Q76I76 1423 aa15.51■□□□□ 0.07
TRAF4-206ENST00000454852 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
TRAF4-206ENST00000454852 NUTM2FA1L443 756 aa15.51■□□□□ 0.07
TRAF4-206ENST00000454852 NPC1L1Q9UHC9 1359 aa15.5■□□□□ 0.07
TRAF4-206ENST00000454852 ACEP12821 1306 aa15.5■□□□□ 0.07
TRAF4-206ENST00000454852 ESCO1Q5FWF5 840 aa15.5■□□□□ 0.07
TRAF4-206ENST00000454852 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-206ENST00000454852 ORAI2Q96SN7 254 aa15.5■□□□□ 0.07
TRAF4-206ENST00000454852 USP6P35125 1406 aa15.5■□□□□ 0.07
TRAF4-206ENST00000454852 EDC4Q6P2E9 1401 aaKnown RBP15.5■□□□□ 0.07
TRAF4-206ENST00000454852 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
TRAF4-206ENST00000454852 NHSL1Q5SYE7 1610 aa15.49■□□□□ 0.07
TRAF4-206ENST00000454852 TOM1O60784 492 aa15.48■□□□□ 0.07
TRAF4-206ENST00000454852 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
TRAF4-206ENST00000454852 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
TRAF4-206ENST00000454852 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-206ENST00000454852 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
TRAF4-206ENST00000454852 NGDNQ8NEJ9 315 aaKnown RBP15.46■□□□□ 0.07
TRAF4-206ENST00000454852 PMFBP1Q8TBY8 1022 aa15.46■□□□□ 0.07
TRAF4-206ENST00000454852 ROBO1Q9Y6N7 1651 aa15.46■□□□□ 0.07
TRAF4-206ENST00000454852 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
TRAF4-206ENST00000454852 PXDNQ92626 1479 aa15.46■□□□□ 0.06
TRAF4-206ENST00000454852 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
TRAF4-206ENST00000454852 NSD2O96028 1365 aa15.45■□□□□ 0.06
TRAF4-206ENST00000454852 USP54Q70EL1 1684 aa15.44■□□□□ 0.06
TRAF4-206ENST00000454852 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
TRAF4-206ENST00000454852 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-206ENST00000454852 KNSTRNQ9Y448 316 aa15.44■□□□□ 0.06
TRAF4-206ENST00000454852 SBNO1A3KN83 1393 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms