RNA–Protein interactions for RNA: ENST00000454783.5

LTA-214, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LTA, Length 1,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-214ENST00000454783 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
LTA-214ENST00000454783 CDC42BPGQ6DT37 1551 aa23.28■■□□□ 1.32
LTA-214ENST00000454783 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
LTA-214ENST00000454783 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.32
LTA-214ENST00000454783 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
LTA-214ENST00000454783 LRRC59Q96AG4 307 aaKnown RBP23.23■■□□□ 1.31
LTA-214ENST00000454783 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
LTA-214ENST00000454783 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
LTA-214ENST00000454783 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
LTA-214ENST00000454783 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
LTA-214ENST00000454783 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
LTA-214ENST00000454783 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
LTA-214ENST00000454783 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
LTA-214ENST00000454783 FMN2Q9NZ56 1722 aa23.2■■□□□ 1.3
LTA-214ENST00000454783 SIRT1Q96EB6 747 aa23.19■■□□□ 1.3
LTA-214ENST00000454783 PNPLA6Q8IY17 1366 aa23.19■■□□□ 1.3
LTA-214ENST00000454783 NUTM2FA1L443 756 aa23.18■■□□□ 1.3
LTA-214ENST00000454783 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
LTA-214ENST00000454783 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
LTA-214ENST00000454783 ADGRB1O14514 1584 aa23.17■■□□□ 1.3
LTA-214ENST00000454783 RGPD8O14715 1765 aaPredicted RBP23.15■■□□□ 1.3
LTA-214ENST00000454783 PRAM1Q96QH2 718 aa23.14■■□□□ 1.3
LTA-214ENST00000454783 DLC1Q96QB1 1528 aa23.14■■□□□ 1.29
LTA-214ENST00000454783 SAFB2Q14151 953 aaKnown RBP eCLIP23.13■■□□□ 1.29
LTA-214ENST00000454783 STAC3Q96MF2 364 aa23.12■■□□□ 1.29
LTA-214ENST00000454783 PXDNQ92626 1479 aa23.11■■□□□ 1.29
LTA-214ENST00000454783 FOXO3O43524 673 aa23.11■■□□□ 1.29
LTA-214ENST00000454783 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
LTA-214ENST00000454783 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
LTA-214ENST00000454783 ZNF772Q68DY9 489 aaPredicted RBP23.09■■□□□ 1.29
LTA-214ENST00000454783 POGKQ9P215 609 aa23.09■■□□□ 1.29
LTA-214ENST00000454783 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
LTA-214ENST00000454783 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
LTA-214ENST00000454783 KIF1AQ12756 1690 aa23.08■■□□□ 1.29
LTA-214ENST00000454783 AFF2P51816 1311 aa23.07■■□□□ 1.28
LTA-214ENST00000454783 ADGRB2O60241 1585 aa23.05■■□□□ 1.28
LTA-214ENST00000454783 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
LTA-214ENST00000454783 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
LTA-214ENST00000454783 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
LTA-214ENST00000454783 ARHGEF28Q8N1W1 1705 aaKnown RBP23.03■■□□□ 1.28
LTA-214ENST00000454783 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
LTA-214ENST00000454783 PHF8Q9UPP1 1060 aa23.02■■□□□ 1.28
LTA-214ENST00000454783 KIAA1210Q9ULL0 1709 aa23.01■■□□□ 1.27
LTA-214ENST00000454783 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
LTA-214ENST00000454783 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
LTA-214ENST00000454783 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
LTA-214ENST00000454783 MARF1Q9Y4F3 1742 aaKnown RBP22.98■■□□□ 1.27
LTA-214ENST00000454783 ANKARQ7Z5J8 1434 aa22.98■■□□□ 1.27
LTA-214ENST00000454783 RXRBP28702 533 aa22.98■■□□□ 1.27
LTA-214ENST00000454783 SPATA31A3Q5VYP0 1347 aa22.97■■□□□ 1.27
LTA-214ENST00000454783 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
LTA-214ENST00000454783 QTRT2Q9H974 415 aaKnown RBP22.95■■□□□ 1.26
LTA-214ENST00000454783 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
LTA-214ENST00000454783 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
LTA-214ENST00000454783 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
LTA-214ENST00000454783 PMFBP1Q8TBY8 1022 aa22.94■■□□□ 1.26
LTA-214ENST00000454783 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
LTA-214ENST00000454783 PSME1Q06323 249 aa22.92■■□□□ 1.26
LTA-214ENST00000454783 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
LTA-214ENST00000454783 TNS3Q68CZ2 1445 aa22.91■■□□□ 1.26
LTA-214ENST00000454783 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
LTA-214ENST00000454783 EIF3AQ14152 1382 aaKnown RBP22.91■■□□□ 1.26
LTA-214ENST00000454783 USP21Q9UK80 565 aa22.91■■□□□ 1.26
LTA-214ENST00000454783 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
LTA-214ENST00000454783 SBNO1A3KN83 1393 aa22.89■■□□□ 1.26
LTA-214ENST00000454783 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.26
LTA-214ENST00000454783 TRPM3Q9HCF6 1732 aaPredicted RBP22.89■■□□□ 1.25
LTA-214ENST00000454783 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
LTA-214ENST00000454783 ITSN1Q15811 1721 aa22.87■■□□□ 1.25
LTA-214ENST00000454783 ABCA3Q99758 1704 aa22.87■■□□□ 1.25
LTA-214ENST00000454783 RGS12O14924 1447 aa22.86■■□□□ 1.25
LTA-214ENST00000454783 PLEKHG5O94827 1062 aa22.86■■□□□ 1.25
LTA-214ENST00000454783 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
LTA-214ENST00000454783 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
LTA-214ENST00000454783 ATP7BP35670 1465 aa22.85■■□□□ 1.25
LTA-214ENST00000454783 BCL9LQ86UU0 1499 aa22.85■■□□□ 1.25
LTA-214ENST00000454783 ATRNO75882 1429 aa22.85■■□□□ 1.25
LTA-214ENST00000454783 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
LTA-214ENST00000454783 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
LTA-214ENST00000454783 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
LTA-214ENST00000454783 TRPM1Q7Z4N2 1603 aa22.84■■□□□ 1.25
LTA-214ENST00000454783 ALS2Q96Q42 1657 aa22.83■■□□□ 1.25
LTA-214ENST00000454783 ARHGEF10O15013 1369 aa22.83■■□□□ 1.25
LTA-214ENST00000454783 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
LTA-214ENST00000454783 TOPAZ1Q8N9V7 1692 aa22.82■■□□□ 1.24
LTA-214ENST00000454783 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
LTA-214ENST00000454783 HAP1P54257 671 aaPredicted RBP22.81■■□□□ 1.24
LTA-214ENST00000454783 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
LTA-214ENST00000454783 QRICH2Q9H0J4 1663 aa22.8■■□□□ 1.24
LTA-214ENST00000454783 SLIT2O94813 1529 aa22.79■■□□□ 1.24
LTA-214ENST00000454783 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
LTA-214ENST00000454783 CENPJQ9HC77 1338 aaPredicted RBP22.78■■□□□ 1.24
LTA-214ENST00000454783 PLCH1Q4KWH8 1693 aa22.78■■□□□ 1.24
LTA-214ENST00000454783 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
LTA-214ENST00000454783 CRYBG1Q9Y4K1 1723 aa22.76■■□□□ 1.23
LTA-214ENST00000454783 UNC5CLQ8IV45 518 aa22.76■■□□□ 1.23
LTA-214ENST00000454783 PAK3O75914 559 aaPredicted RBP22.75■■□□□ 1.23
LTA-214ENST00000454783 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
LTA-214ENST00000454783 CCDC61Q9Y6R9 512 aa22.74■■□□□ 1.23
LTA-214ENST00000454783 GJD4Q96KN9 370 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms