RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 NAIPQ13075 1403 aa33■■■□□ 2.87
HMG20B-206ENST00000453933 ZRANB1Q9UGI0 708 aa32.99■■■□□ 2.87
HMG20B-206ENST00000453933 NPHP3Q7Z494 1330 aa32.99■■■□□ 2.87
HMG20B-206ENST00000453933 MYOM2P54296 1465 aa32.99■■■□□ 2.87
HMG20B-206ENST00000453933 COL22A1Q8NFW1 1626 aaPredicted RBP32.99■■■□□ 2.87
HMG20B-206ENST00000453933 BCL9LQ86UU0 1499 aa32.98■■■□□ 2.87
HMG20B-206ENST00000453933 XPCQ01831 940 aaPredicted RBP32.97■■■□□ 2.87
HMG20B-206ENST00000453933 FOXO3O43524 673 aa32.96■■■□□ 2.87
HMG20B-206ENST00000453933 PXDNQ92626 1479 aa32.93■■■□□ 2.86
HMG20B-206ENST00000453933 FOXD1Q16676 465 aa32.93■■■□□ 2.86
HMG20B-206ENST00000453933 CCDC125Q86Z20 511 aa32.92■■■□□ 2.86
HMG20B-206ENST00000453933 GJD4Q96KN9 370 aaPredicted RBP32.92■■■□□ 2.86
HMG20B-206ENST00000453933 NUTM2FA1L443 756 aa32.9■■■□□ 2.86
HMG20B-206ENST00000453933 SLC4A1APQ9BWU0 796 aaKnown RBP32.9■■■□□ 2.86
HMG20B-206ENST00000453933 CDC42BPGQ6DT37 1551 aa32.87■■■□□ 2.85
HMG20B-206ENST00000453933 WAPLQ7Z5K2 1190 aa32.87■■■□□ 2.85
HMG20B-206ENST00000453933 STK26Q9P289 416 aa32.87■■■□□ 2.85
HMG20B-206ENST00000453933 EP400Q96L91 3159 aa32.86■■■□□ 2.85
HMG20B-206ENST00000453933 RRBP1Q9P2E9 1410 aaKnown RBP32.85■■■□□ 2.85
HMG20B-206ENST00000453933 ADGRF5Q8IZF2 1346 aa32.85■■■□□ 2.85
HMG20B-206ENST00000453933 LRPPRCP42704 1394 aaKnown RBP32.83■■■□□ 2.85
HMG20B-206ENST00000453933 PPLO60437 1756 aa32.83■■■□□ 2.85
HMG20B-206ENST00000453933 UNC5CLQ8IV45 518 aa32.81■■■□□ 2.84
HMG20B-206ENST00000453933 RGL3Q3MIN7 710 aa32.78■■■□□ 2.84
HMG20B-206ENST00000453933 PLEKHH1Q9ULM0 1364 aa32.78■■■□□ 2.84
HMG20B-206ENST00000453933 SPATA31A3Q5VYP0 1347 aa32.77■■■□□ 2.84
HMG20B-206ENST00000453933 MARF1Q9Y4F3 1742 aaKnown RBP32.77■■■□□ 2.84
HMG20B-206ENST00000453933 TMEM132EQ6IEE7 984 aa32.77■■■□□ 2.84
HMG20B-206ENST00000453933 TECPR2O15040 1411 aa32.77■■■□□ 2.84
HMG20B-206ENST00000453933 RALGAPBQ86X10 1494 aa32.76■■■□□ 2.84
HMG20B-206ENST00000453933 SLIT2O94813 1529 aa32.76■■■□□ 2.83
HMG20B-206ENST00000453933 ABCC11Q96J66 1382 aa32.74■■■□□ 2.83
HMG20B-206ENST00000453933 KRT28Q7Z3Y7 464 aa32.73■■■□□ 2.83
HMG20B-206ENST00000453933 GLI3P10071 1580 aa32.73■■■□□ 2.83
HMG20B-206ENST00000453933 BLMP54132 1417 aaPredicted RBP32.72■■■□□ 2.83
HMG20B-206ENST00000453933 DEFB132Q7Z7B7 95 aa32.7■■■□□ 2.83
HMG20B-206ENST00000453933 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.68■■■□□ 2.82
HMG20B-206ENST00000453933 CCDC144AA2RUR9 1427 aa32.68■■■□□ 2.82
HMG20B-206ENST00000453933 SPATA31E1Q6ZUB1 1445 aa32.68■■■□□ 2.82
HMG20B-206ENST00000453933 SEPT12Q8IYM1 358 aa32.67■■■□□ 2.82
HMG20B-206ENST00000453933 ANKRD30BQ9BXX2 1392 aa32.67■■■□□ 2.82
HMG20B-206ENST00000453933 CABLES1Q8TDN4 633 aa32.66■■■□□ 2.82
HMG20B-206ENST00000453933 PLEKHG5O94827 1062 aa32.63■■■□□ 2.81
HMG20B-206ENST00000453933 HAP1P54257 671 aaPredicted RBP32.63■■■□□ 2.81
HMG20B-206ENST00000453933 VPS72Q15906 364 aa32.63■■■□□ 2.81
HMG20B-206ENST00000453933 FMN2Q9NZ56 1722 aa32.63■■■□□ 2.81
HMG20B-206ENST00000453933 YTHDC2Q9H6S0 1430 aaKnown RBP32.62■■■□□ 2.81
HMG20B-206ENST00000453933 PHF8Q9UPP1 1060 aa32.62■■■□□ 2.81
HMG20B-206ENST00000453933 USP32Q8NFA0 1604 aa32.62■■■□□ 2.81
HMG20B-206ENST00000453933 PIK3C2GO75747 1445 aa32.61■■■□□ 2.81
HMG20B-206ENST00000453933 SIRT1Q96EB6 747 aa32.61■■■□□ 2.81
HMG20B-206ENST00000453933 ONECUT3O60422 494 aaPredicted RBP32.6■■■□□ 2.81
HMG20B-206ENST00000453933 PSME1Q06323 249 aa32.6■■■□□ 2.81
HMG20B-206ENST00000453933 SF3B2Q13435 895 aaKnown RBP32.6■■■□□ 2.81
HMG20B-206ENST00000453933 KIF1AQ12756 1690 aa32.59■■■□□ 2.81
HMG20B-206ENST00000453933 TNS3Q68CZ2 1445 aa32.59■■■□□ 2.81
HMG20B-206ENST00000453933 KNDC1Q76NI1 1749 aa32.58■■■□□ 2.81
HMG20B-206ENST00000453933 CCDC9Q9Y3X0 531 aaKnown RBP32.58■■■□□ 2.81
HMG20B-206ENST00000453933 MPHOSPH9Q99550 1183 aa32.57■■■□□ 2.8
HMG20B-206ENST00000453933 BRWD3Q6RI45 1802 aa32.56■■■□□ 2.8
HMG20B-206ENST00000453933 LMOD2Q6P5Q4 547 aa32.55■■■□□ 2.8
HMG20B-206ENST00000453933 KRT27Q7Z3Y8 459 aa32.55■■■□□ 2.8
HMG20B-206ENST00000453933 IFT172Q9UG01 1749 aa32.54■■■□□ 2.8
HMG20B-206ENST00000453933 C14orf93Q9H972 538 aaKnown RBP32.54■■■□□ 2.8
HMG20B-206ENST00000453933 FAM83GA6ND36 823 aa32.52■■■□□ 2.8
HMG20B-206ENST00000453933 SBNO1A3KN83 1393 aa32.52■■■□□ 2.8
HMG20B-206ENST00000453933 SAFB2Q14151 953 aaKnown RBP eCLIP32.5■■■□□ 2.79
HMG20B-206ENST00000453933 CFAP70Q5T0N1 1121 aa32.5■■■□□ 2.79
HMG20B-206ENST00000453933 NRXN1Q9ULB1 1477 aa32.48■■■□□ 2.79
HMG20B-206ENST00000453933 PRAM1Q96QH2 718 aa32.48■■■□□ 2.79
HMG20B-206ENST00000453933 ARHGEF10O15013 1369 aa32.47■■■□□ 2.79
HMG20B-206ENST00000453933 PMFBP1Q8TBY8 1022 aa32.47■■■□□ 2.79
HMG20B-206ENST00000453933 RGPD8O14715 1765 aaPredicted RBP32.47■■■□□ 2.79
HMG20B-206ENST00000453933 DHX57Q6P158 1386 aaKnown RBP32.46■■■□□ 2.79
HMG20B-206ENST00000453933 PLCH1Q4KWH8 1693 aa32.45■■■□□ 2.79
HMG20B-206ENST00000453933 A0A0G2JS52 829 aa32.44■■■□□ 2.78
HMG20B-206ENST00000453933 PSDA5PKW4 1024 aaPredicted RBP32.44■■■□□ 2.78
HMG20B-206ENST00000453933 MYT1Q01538 1121 aa32.44■■■□□ 2.78
HMG20B-206ENST00000453933 NWD2Q9ULI1 1742 aa32.43■■■□□ 2.78
HMG20B-206ENST00000453933 FAM98CQ17RN3 349 aaKnown RBP32.43■■■□□ 2.78
HMG20B-206ENST00000453933 BAG6P46379 1132 aa32.42■■■□□ 2.78
HMG20B-206ENST00000453933 BTG4Q9NY30 223 aa32.4■■■□□ 2.78
HMG20B-206ENST00000453933 POGKQ9P215 609 aa32.39■■■□□ 2.78
HMG20B-206ENST00000453933 ABCA3Q99758 1704 aa32.38■■■□□ 2.77
HMG20B-206ENST00000453933 LRP5O75197 1615 aa32.37■■■□□ 2.77
HMG20B-206ENST00000453933 HRCP23327 699 aa32.37■■■□□ 2.77
HMG20B-206ENST00000453933 ANKARQ7Z5J8 1434 aa32.35■■■□□ 2.77
HMG20B-206ENST00000453933 EN1Q05925 392 aaPredicted RBP32.34■■■□□ 2.77
HMG20B-206ENST00000453933 FAM182BQ5T319 152 aa32.34■■■□□ 2.77
HMG20B-206ENST00000453933 HIRIP3Q9BW71 556 aaPredicted RBP32.32■■■□□ 2.76
HMG20B-206ENST00000453933 NRAPQ86VF7 1730 aa32.3■■■□□ 2.76
HMG20B-206ENST00000453933 DLC1Q96QB1 1528 aa32.29■■■□□ 2.76
HMG20B-206ENST00000453933 SPATA31A5Q5VU36 1347 aa32.28■■■□□ 2.76
HMG20B-206ENST00000453933 SPATA31A7Q8IWB4 1347 aa32.28■■■□□ 2.76
HMG20B-206ENST00000453933 PRR36Q9H6K5 1346 aa32.28■■■□□ 2.76
HMG20B-206ENST00000453933 GPRASP1Q5JY77 1395 aa32.28■■■□□ 2.76
HMG20B-206ENST00000453933 ACIN1Q9UKV3 1341 aaKnown RBP32.27■■■□□ 2.76
HMG20B-206ENST00000453933 TRAK1Q9UPV9 953 aa32.27■■■□□ 2.76
HMG20B-206ENST00000453933 TRPM3Q9HCF6 1732 aaPredicted RBP32.26■■■□□ 2.75
HMG20B-206ENST00000453933 MINK1Q8N4C8 1332 aaPredicted RBP32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms