RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CDC42BPGQ6DT37 1551 aa17.58■□□□□ 0.41
HERC3-207ENST00000452979 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
HERC3-207ENST00000452979 MARF1Q9Y4F3 1742 aaKnown RBP17.55■□□□□ 0.4
HERC3-207ENST00000452979 NPHP3Q7Z494 1330 aa17.55■□□□□ 0.4
HERC3-207ENST00000452979 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
HERC3-207ENST00000452979 MYOM2P54296 1465 aa17.55■□□□□ 0.4
HERC3-207ENST00000452979 PXDNQ92626 1479 aa17.55■□□□□ 0.4
HERC3-207ENST00000452979 ATRNO75882 1429 aa17.55■□□□□ 0.4
HERC3-207ENST00000452979 ATAD2Q6PL18 1390 aa17.54■□□□□ 0.4
HERC3-207ENST00000452979 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
HERC3-207ENST00000452979 TECPR2O15040 1411 aa17.54■□□□□ 0.4
HERC3-207ENST00000452979 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
HERC3-207ENST00000452979 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.4
HERC3-207ENST00000452979 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.4
HERC3-207ENST00000452979 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
HERC3-207ENST00000452979 ABCC11Q96J66 1382 aa17.52■□□□□ 0.39
HERC3-207ENST00000452979 FOXO3O43524 673 aa17.51■□□□□ 0.39
HERC3-207ENST00000452979 FOXD1Q16676 465 aa17.51■□□□□ 0.39
HERC3-207ENST00000452979 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
HERC3-207ENST00000452979 ANKRD30BQ9BXX2 1392 aa17.51■□□□□ 0.39
HERC3-207ENST00000452979 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
HERC3-207ENST00000452979 WAPLQ7Z5K2 1190 aa17.5■□□□□ 0.39
HERC3-207ENST00000452979 FMN2Q9NZ56 1722 aa17.48■□□□□ 0.39
HERC3-207ENST00000452979 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
HERC3-207ENST00000452979 SIRT1Q96EB6 747 aa17.48■□□□□ 0.39
HERC3-207ENST00000452979 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
HERC3-207ENST00000452979 STK26Q9P289 416 aa17.48■□□□□ 0.39
HERC3-207ENST00000452979 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
HERC3-207ENST00000452979 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
HERC3-207ENST00000452979 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
HERC3-207ENST00000452979 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
HERC3-207ENST00000452979 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.39
HERC3-207ENST00000452979 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
HERC3-207ENST00000452979 KIF1AQ12756 1690 aa17.45■□□□□ 0.38
HERC3-207ENST00000452979 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
HERC3-207ENST00000452979 SPATA31A3Q5VYP0 1347 aa17.45■□□□□ 0.38
HERC3-207ENST00000452979 EP400Q96L91 3159 aa17.44■□□□□ 0.38
HERC3-207ENST00000452979 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
HERC3-207ENST00000452979 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
HERC3-207ENST00000452979 SLIT2O94813 1529 aa17.43■□□□□ 0.38
HERC3-207ENST00000452979 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
HERC3-207ENST00000452979 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
HERC3-207ENST00000452979 C14orf93Q9H972 538 aaKnown RBP17.42■□□□□ 0.38
HERC3-207ENST00000452979 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
HERC3-207ENST00000452979 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
HERC3-207ENST00000452979 GLI3P10071 1580 aa17.4■□□□□ 0.38
HERC3-207ENST00000452979 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
HERC3-207ENST00000452979 USP32Q8NFA0 1604 aa17.39■□□□□ 0.38
HERC3-207ENST00000452979 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
HERC3-207ENST00000452979 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
HERC3-207ENST00000452979 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
HERC3-207ENST00000452979 PSME1Q06323 249 aa17.37■□□□□ 0.37
HERC3-207ENST00000452979 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
HERC3-207ENST00000452979 BRWD3Q6RI45 1802 aa17.37■□□□□ 0.37
HERC3-207ENST00000452979 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
HERC3-207ENST00000452979 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
HERC3-207ENST00000452979 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
HERC3-207ENST00000452979 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
HERC3-207ENST00000452979 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
HERC3-207ENST00000452979 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
HERC3-207ENST00000452979 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
HERC3-207ENST00000452979 VPS72Q15906 364 aa17.34■□□□□ 0.37
HERC3-207ENST00000452979 ABCA3Q99758 1704 aa17.33■□□□□ 0.37
HERC3-207ENST00000452979 PLCH1Q4KWH8 1693 aa17.33■□□□□ 0.37
HERC3-207ENST00000452979 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
HERC3-207ENST00000452979 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
HERC3-207ENST00000452979 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
HERC3-207ENST00000452979 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
HERC3-207ENST00000452979 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
HERC3-207ENST00000452979 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
HERC3-207ENST00000452979 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
HERC3-207ENST00000452979 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
HERC3-207ENST00000452979 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
HERC3-207ENST00000452979 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
HERC3-207ENST00000452979 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.36
HERC3-207ENST00000452979 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.36
HERC3-207ENST00000452979 POGKQ9P215 609 aa17.27■□□□□ 0.36
HERC3-207ENST00000452979 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
HERC3-207ENST00000452979 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
HERC3-207ENST00000452979 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
HERC3-207ENST00000452979 NRAPQ86VF7 1730 aa17.26■□□□□ 0.35
HERC3-207ENST00000452979 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
HERC3-207ENST00000452979 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
HERC3-207ENST00000452979 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
HERC3-207ENST00000452979 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
HERC3-207ENST00000452979 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
HERC3-207ENST00000452979 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
HERC3-207ENST00000452979 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
HERC3-207ENST00000452979 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
HERC3-207ENST00000452979 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
HERC3-207ENST00000452979 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
HERC3-207ENST00000452979 BTG4Q9NY30 223 aa17.21■□□□□ 0.35
HERC3-207ENST00000452979 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
HERC3-207ENST00000452979 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.34
HERC3-207ENST00000452979 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.34
HERC3-207ENST00000452979 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
HERC3-207ENST00000452979 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
HERC3-207ENST00000452979 HIRIP3Q9BW71 556 aaPredicted RBP17.19■□□□□ 0.34
HERC3-207ENST00000452979 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
HERC3-207ENST00000452979 LRP5O75197 1615 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms