RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 FANCAO15360 1455 aa16.18■□□□□ 0.18
THUMPD3-206ENST00000452837 INO80Q9ULG1 1556 aaPredicted RBP16.18■□□□□ 0.18
THUMPD3-206ENST00000452837 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
THUMPD3-206ENST00000452837 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
THUMPD3-206ENST00000452837 MTHFSP49914 203 aa16.16■□□□□ 0.18
THUMPD3-206ENST00000452837 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
THUMPD3-206ENST00000452837 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
THUMPD3-206ENST00000452837 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
THUMPD3-206ENST00000452837 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
THUMPD3-206ENST00000452837 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
THUMPD3-206ENST00000452837 POGKQ9P215 609 aa16.15■□□□□ 0.18
THUMPD3-206ENST00000452837 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
THUMPD3-206ENST00000452837 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
THUMPD3-206ENST00000452837 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 ADGRL1O94910 1474 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 IFT172Q9UG01 1749 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 EFCAB6Q5THR3 1501 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-206ENST00000452837 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
THUMPD3-206ENST00000452837 SLC24A1O60721 1099 aa16.12■□□□□ 0.17
THUMPD3-206ENST00000452837 ABCA9Q8IUA7 1624 aa16.11■□□□□ 0.17
THUMPD3-206ENST00000452837 KIF1BO60333 1816 aa16.11■□□□□ 0.17
THUMPD3-206ENST00000452837 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
THUMPD3-206ENST00000452837 C14orf93Q9H972 538 aaKnown RBP16.11■□□□□ 0.17
THUMPD3-206ENST00000452837 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
THUMPD3-206ENST00000452837 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
THUMPD3-206ENST00000452837 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
THUMPD3-206ENST00000452837 ANTXR1Q9H6X2 564 aa16.1■□□□□ 0.17
THUMPD3-206ENST00000452837 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
THUMPD3-206ENST00000452837 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
THUMPD3-206ENST00000452837 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
THUMPD3-206ENST00000452837 ADGRB3O60242 1522 aa16.08■□□□□ 0.17
THUMPD3-206ENST00000452837 ADGRB1O14514 1584 aa16.08■□□□□ 0.17
THUMPD3-206ENST00000452837 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
THUMPD3-206ENST00000452837 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
THUMPD3-206ENST00000452837 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
THUMPD3-206ENST00000452837 GGT6Q6P531 493 aa16.07■□□□□ 0.16
THUMPD3-206ENST00000452837 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
THUMPD3-206ENST00000452837 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 BECN1Q14457 450 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 NPATQ14207 1427 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 QRICH2Q9H0J4 1663 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 CABP2Q9NPB3 220 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 KIDINS220Q9ULH0 1771 aa16.06■□□□□ 0.16
THUMPD3-206ENST00000452837 MVPQ14764 893 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-206ENST00000452837 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
THUMPD3-206ENST00000452837 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-206ENST00000452837 RWDD1Q9H446 243 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-206ENST00000452837 CFAP53Q96M91 514 aa16.03■□□□□ 0.16
THUMPD3-206ENST00000452837 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
THUMPD3-206ENST00000452837 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
THUMPD3-206ENST00000452837 CD109Q6YHK3 1445 aa16.02■□□□□ 0.15
THUMPD3-206ENST00000452837 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.15
THUMPD3-206ENST00000452837 DZIP1LQ8IYY4 767 aaKnown RBP16.02■□□□□ 0.15
THUMPD3-206ENST00000452837 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
THUMPD3-206ENST00000452837 TULP4Q9NRJ4 1543 aa16.02■□□□□ 0.15
THUMPD3-206ENST00000452837 TRIM27P14373 513 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 ARXQ96QS3 562 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
THUMPD3-206ENST00000452837 PPLO60437 1756 aa16■□□□□ 0.15
THUMPD3-206ENST00000452837 ASXL2Q76L83 1435 aa16■□□□□ 0.15
THUMPD3-206ENST00000452837 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
THUMPD3-206ENST00000452837 AAMPQ13685 434 aa16■□□□□ 0.15
THUMPD3-206ENST00000452837 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
THUMPD3-206ENST00000452837 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
THUMPD3-206ENST00000452837 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
THUMPD3-206ENST00000452837 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
THUMPD3-206ENST00000452837 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
THUMPD3-206ENST00000452837 TMPOP42166 694 aaKnown RBP15.98■□□□□ 0.15
THUMPD3-206ENST00000452837 USP32Q8NFA0 1604 aa15.98■□□□□ 0.15
THUMPD3-206ENST00000452837 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 ADGRB2O60241 1585 aa15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 STK26Q9P289 416 aa15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 GLI2P10070 1586 aa15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
THUMPD3-206ENST00000452837 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
THUMPD3-206ENST00000452837 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
THUMPD3-206ENST00000452837 TMEM57Q8N5G2 664 aa15.96■□□□□ 0.14
THUMPD3-206ENST00000452837 GZF1Q9H116 711 aaPredicted RBP15.95■□□□□ 0.14
THUMPD3-206ENST00000452837 ATF7IPQ6VMQ6 1270 aa15.94■□□□□ 0.14
THUMPD3-206ENST00000452837 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
THUMPD3-206ENST00000452837 RRAGDQ9NQL2 400 aaPredicted RBP15.94■□□□□ 0.14
THUMPD3-206ENST00000452837 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 RPGRIP1LQ68CZ1 1315 aa15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 FBLN1P23142 703 aa15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 ARHGEF28Q8N1W1 1705 aaKnown RBP15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 MCM4P33991 863 aa15.93■□□□□ 0.14
THUMPD3-206ENST00000452837 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms