RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
ALMS1P1-202ENST00000450720 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
ALMS1P1-202ENST00000450720 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
ALMS1P1-202ENST00000450720 PIP4K2BP78356 416 aa23.41■■□□□ 1.34
ALMS1P1-202ENST00000450720 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
ALMS1P1-202ENST00000450720 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
ALMS1P1-202ENST00000450720 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.4■■□□□ 1.34
ALMS1P1-202ENST00000450720 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
ALMS1P1-202ENST00000450720 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
ALMS1P1-202ENST00000450720 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
ALMS1P1-202ENST00000450720 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
ALMS1P1-202ENST00000450720 DCCP43146 1447 aa23.37■■□□□ 1.33
ALMS1P1-202ENST00000450720 FBXO41Q8TF61 875 aa23.37■■□□□ 1.33
ALMS1P1-202ENST00000450720 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
ALMS1P1-202ENST00000450720 NUTM2FA1L443 756 aa23.34■■□□□ 1.33
ALMS1P1-202ENST00000450720 CDC42BPGQ6DT37 1551 aa23.32■■□□□ 1.32
ALMS1P1-202ENST00000450720 USP47Q96K76 1375 aa23.3■■□□□ 1.32
ALMS1P1-202ENST00000450720 MST1RQ04912 1400 aa23.29■■□□□ 1.32
ALMS1P1-202ENST00000450720 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
ALMS1P1-202ENST00000450720 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
ALMS1P1-202ENST00000450720 WASLO00401 505 aaPredicted RBP23.27■■□□□ 1.32
ALMS1P1-202ENST00000450720 ST20-MTHFSA0A0A6YYL1 179 aa23.26■■□□□ 1.31
ALMS1P1-202ENST00000450720 C1orf167Q5SNV9 1468 aa23.26■■□□□ 1.31
ALMS1P1-202ENST00000450720 CDK19Q9BWU1 502 aa23.25■■□□□ 1.31
ALMS1P1-202ENST00000450720 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
ALMS1P1-202ENST00000450720 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
ALMS1P1-202ENST00000450720 FMN2Q9NZ56 1722 aa23.23■■□□□ 1.31
ALMS1P1-202ENST00000450720 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
ALMS1P1-202ENST00000450720 BRINP3Q76B58 766 aa23.22■■□□□ 1.31
ALMS1P1-202ENST00000450720 ORAI2Q96SN7 254 aa23.22■■□□□ 1.31
ALMS1P1-202ENST00000450720 EVC2Q86UK5 1308 aa23.22■■□□□ 1.31
ALMS1P1-202ENST00000450720 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
ALMS1P1-202ENST00000450720 EIF4G2P78344 907 aaKnown RBP eCLIP23.2■■□□□ 1.3
ALMS1P1-202ENST00000450720 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
ALMS1P1-202ENST00000450720 TULP4Q9NRJ4 1543 aa23.19■■□□□ 1.3
ALMS1P1-202ENST00000450720 SBNO2Q9Y2G9 1366 aa23.18■■□□□ 1.3
ALMS1P1-202ENST00000450720 PRR36Q9H6K5 1346 aa23.18■■□□□ 1.3
ALMS1P1-202ENST00000450720 NUDT16Q96DE0 195 aaKnown RBP23.18■■□□□ 1.3
ALMS1P1-202ENST00000450720 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
ALMS1P1-202ENST00000450720 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
ALMS1P1-202ENST00000450720 TESK2Q96S53 571 aa23.16■■□□□ 1.3
ALMS1P1-202ENST00000450720 HSPA1LP34931 641 aa23.15■■□□□ 1.3
ALMS1P1-202ENST00000450720 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
ALMS1P1-202ENST00000450720 ZEB1P37275 1124 aaPredicted RBP23.15■■□□□ 1.3
ALMS1P1-202ENST00000450720 USP32Q8NFA0 1604 aa23.14■■□□□ 1.3
ALMS1P1-202ENST00000450720 ATP7BP35670 1465 aa23.14■■□□□ 1.3
ALMS1P1-202ENST00000450720 PMFBP1Q8TBY8 1022 aa23.14■■□□□ 1.29
ALMS1P1-202ENST00000450720 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
ALMS1P1-202ENST00000450720 FOXO3O43524 673 aa23.13■■□□□ 1.29
ALMS1P1-202ENST00000450720 RGPD8O14715 1765 aaPredicted RBP23.12■■□□□ 1.29
ALMS1P1-202ENST00000450720 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
ALMS1P1-202ENST00000450720 TMF1P82094 1093 aa23.11■■□□□ 1.29
ALMS1P1-202ENST00000450720 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
ALMS1P1-202ENST00000450720 XPCQ01831 940 aaPredicted RBP23.1■■□□□ 1.29
ALMS1P1-202ENST00000450720 DISP3Q9P2K9 1392 aa23.09■■□□□ 1.29
ALMS1P1-202ENST00000450720 NPHP3Q7Z494 1330 aa23.09■■□□□ 1.29
ALMS1P1-202ENST00000450720 NGDNQ8NEJ9 315 aaKnown RBP23.08■■□□□ 1.29
ALMS1P1-202ENST00000450720 PHLPP1O60346 1717 aa23.08■■□□□ 1.28
ALMS1P1-202ENST00000450720 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
ALMS1P1-202ENST00000450720 KIF1AQ12756 1690 aa23.07■■□□□ 1.28
ALMS1P1-202ENST00000450720 ATAD2Q6PL18 1390 aa23.07■■□□□ 1.28
ALMS1P1-202ENST00000450720 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
ALMS1P1-202ENST00000450720 ITSN1Q15811 1721 aa23.06■■□□□ 1.28
ALMS1P1-202ENST00000450720 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
ALMS1P1-202ENST00000450720 PSME1Q06323 249 aa23.05■■□□□ 1.28
ALMS1P1-202ENST00000450720 TMC1Q8TDI8 760 aa23.05■■□□□ 1.28
ALMS1P1-202ENST00000450720 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
ALMS1P1-202ENST00000450720 POLR3GLQ9BT43 218 aa23.04■■□□□ 1.28
ALMS1P1-202ENST00000450720 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
ALMS1P1-202ENST00000450720 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
ALMS1P1-202ENST00000450720 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
ALMS1P1-202ENST00000450720 ACEP12821 1306 aa23.03■■□□□ 1.28
ALMS1P1-202ENST00000450720 PLEKHG3A1L390 1219 aa23.02■■□□□ 1.28
ALMS1P1-202ENST00000450720 SOS2Q07890 1332 aaPredicted RBP23.01■■□□□ 1.27
ALMS1P1-202ENST00000450720 COL16A1Q07092 1604 aaPredicted RBP23.01■■□□□ 1.27
ALMS1P1-202ENST00000450720 LRRC59Q96AG4 307 aaKnown RBP23■■□□□ 1.27
ALMS1P1-202ENST00000450720 PUS7Q96PZ0 661 aaKnown RBP23■■□□□ 1.27
ALMS1P1-202ENST00000450720 PXDNQ92626 1479 aa22.99■■□□□ 1.27
ALMS1P1-202ENST00000450720 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
ALMS1P1-202ENST00000450720 POLR3AO14802 1390 aaPredicted RBP22.98■■□□□ 1.27
ALMS1P1-202ENST00000450720 PAK3O75914 559 aaPredicted RBP22.97■■□□□ 1.27
ALMS1P1-202ENST00000450720 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
ALMS1P1-202ENST00000450720 JCADQ9P266 1359 aa22.95■■□□□ 1.26
ALMS1P1-202ENST00000450720 C11orf95C9JLR9 678 aaPredicted RBP22.93■■□□□ 1.26
ALMS1P1-202ENST00000450720 PLEKHG5O94827 1062 aa22.93■■□□□ 1.26
ALMS1P1-202ENST00000450720 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
ALMS1P1-202ENST00000450720 TERF2IPQ9NYB0 399 aa22.93■■□□□ 1.26
ALMS1P1-202ENST00000450720 NINLQ9Y2I6 1382 aa22.93■■□□□ 1.26
ALMS1P1-202ENST00000450720 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
ALMS1P1-202ENST00000450720 ZNF692Q9BU19 519 aaPredicted RBP22.91■■□□□ 1.26
ALMS1P1-202ENST00000450720 SBNO1A3KN83 1393 aa22.91■■□□□ 1.26
ALMS1P1-202ENST00000450720 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
ALMS1P1-202ENST00000450720 TNS3Q68CZ2 1445 aa22.91■■□□□ 1.26
ALMS1P1-202ENST00000450720 USP6P35125 1406 aa22.9■■□□□ 1.26
ALMS1P1-202ENST00000450720 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.25
ALMS1P1-202ENST00000450720 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
ALMS1P1-202ENST00000450720 KIF7Q2M1P5 1343 aa22.88■■□□□ 1.25
ALMS1P1-202ENST00000450720 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
ALMS1P1-202ENST00000450720 CD163L1Q9NR16 1453 aa22.88■■□□□ 1.25
ALMS1P1-202ENST00000450720 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms