RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
MSH5-209ENST00000450148 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
MSH5-209ENST00000450148 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
MSH5-209ENST00000450148 STK26Q9P289 416 aa18.24■□□□□ 0.51
MSH5-209ENST00000450148 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
MSH5-209ENST00000450148 FMN2Q9NZ56 1722 aa18.22■□□□□ 0.51
MSH5-209ENST00000450148 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
MSH5-209ENST00000450148 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
MSH5-209ENST00000450148 SIRT1Q96EB6 747 aa18.21■□□□□ 0.51
MSH5-209ENST00000450148 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
MSH5-209ENST00000450148 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
MSH5-209ENST00000450148 DHX57Q6P158 1386 aaKnown RBP18.18■□□□□ 0.5
MSH5-209ENST00000450148 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
MSH5-209ENST00000450148 DLC1Q96QB1 1528 aa18.18■□□□□ 0.5
MSH5-209ENST00000450148 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
MSH5-209ENST00000450148 PXDNQ92626 1479 aa18.15■□□□□ 0.5
MSH5-209ENST00000450148 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
MSH5-209ENST00000450148 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
MSH5-209ENST00000450148 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
MSH5-209ENST00000450148 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
MSH5-209ENST00000450148 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
MSH5-209ENST00000450148 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
MSH5-209ENST00000450148 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
MSH5-209ENST00000450148 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
MSH5-209ENST00000450148 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
MSH5-209ENST00000450148 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
MSH5-209ENST00000450148 ZNF772Q68DY9 489 aaPredicted RBP18.11■□□□□ 0.49
MSH5-209ENST00000450148 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
MSH5-209ENST00000450148 NPHP3Q7Z494 1330 aa18.11■□□□□ 0.49
MSH5-209ENST00000450148 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
MSH5-209ENST00000450148 USP32Q8NFA0 1604 aa18.11■□□□□ 0.49
MSH5-209ENST00000450148 FOXO3O43524 673 aa18.1■□□□□ 0.49
MSH5-209ENST00000450148 AFF2P51816 1311 aa18.09■□□□□ 0.49
MSH5-209ENST00000450148 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
MSH5-209ENST00000450148 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
MSH5-209ENST00000450148 XPCQ01831 940 aaPredicted RBP18.07■□□□□ 0.48
MSH5-209ENST00000450148 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
MSH5-209ENST00000450148 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
MSH5-209ENST00000450148 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
MSH5-209ENST00000450148 C8orf37Q96NL8 207 aa18.06■□□□□ 0.48
MSH5-209ENST00000450148 POGKQ9P215 609 aa18.04■□□□□ 0.48
MSH5-209ENST00000450148 ADAMTS2O95450 1211 aa18.03■□□□□ 0.48
MSH5-209ENST00000450148 ANKARQ7Z5J8 1434 aa18.03■□□□□ 0.48
MSH5-209ENST00000450148 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
MSH5-209ENST00000450148 CDK12Q9NYV4 1490 aaPredicted RBP18.02■□□□□ 0.48
MSH5-209ENST00000450148 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
MSH5-209ENST00000450148 RXRBP28702 533 aa18.01■□□□□ 0.47
MSH5-209ENST00000450148 PRR36Q9H6K5 1346 aa18■□□□□ 0.47
MSH5-209ENST00000450148 TULP4Q9NRJ4 1543 aa18■□□□□ 0.47
MSH5-209ENST00000450148 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
MSH5-209ENST00000450148 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
MSH5-209ENST00000450148 NGLY1Q96IV0 654 aa18■□□□□ 0.47
MSH5-209ENST00000450148 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
MSH5-209ENST00000450148 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
MSH5-209ENST00000450148 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
MSH5-209ENST00000450148 QTRT2Q9H974 415 aaKnown RBP17.99■□□□□ 0.47
MSH5-209ENST00000450148 ABCA3Q99758 1704 aa17.98■□□□□ 0.47
MSH5-209ENST00000450148 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
MSH5-209ENST00000450148 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
MSH5-209ENST00000450148 WASLO00401 505 aaPredicted RBP17.97■□□□□ 0.47
MSH5-209ENST00000450148 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
MSH5-209ENST00000450148 BCL9LQ86UU0 1499 aa17.96■□□□□ 0.47
MSH5-209ENST00000450148 RBM6P78332 1123 aaKnown RBP17.96■□□□□ 0.47
MSH5-209ENST00000450148 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
MSH5-209ENST00000450148 RGS12O14924 1447 aa17.96■□□□□ 0.47
MSH5-209ENST00000450148 ALS2Q96Q42 1657 aa17.96■□□□□ 0.47
MSH5-209ENST00000450148 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
MSH5-209ENST00000450148 USP21Q9UK80 565 aa17.95■□□□□ 0.46
MSH5-209ENST00000450148 ATRNO75882 1429 aa17.95■□□□□ 0.46
MSH5-209ENST00000450148 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
MSH5-209ENST00000450148 ATP7BP35670 1465 aa17.95■□□□□ 0.46
MSH5-209ENST00000450148 EIF3AQ14152 1382 aaKnown RBP17.94■□□□□ 0.46
MSH5-209ENST00000450148 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
MSH5-209ENST00000450148 PSME1Q06323 249 aa17.93■□□□□ 0.46
MSH5-209ENST00000450148 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
MSH5-209ENST00000450148 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
MSH5-209ENST00000450148 SLIT2O94813 1529 aa17.93■□□□□ 0.46
MSH5-209ENST00000450148 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
MSH5-209ENST00000450148 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
MSH5-209ENST00000450148 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
MSH5-209ENST00000450148 CRYBG1Q9Y4K1 1723 aa17.91■□□□□ 0.46
MSH5-209ENST00000450148 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
MSH5-209ENST00000450148 CABLES1Q8TDN4 633 aa17.89■□□□□ 0.45
MSH5-209ENST00000450148 PLCH1Q4KWH8 1693 aa17.89■□□□□ 0.45
MSH5-209ENST00000450148 NUDT16Q96DE0 195 aaKnown RBP17.88■□□□□ 0.45
MSH5-209ENST00000450148 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
MSH5-209ENST00000450148 NWD2Q9ULI1 1742 aa17.88■□□□□ 0.45
MSH5-209ENST00000450148 QRICH2Q9H0J4 1663 aa17.87■□□□□ 0.45
MSH5-209ENST00000450148 GLI3P10071 1580 aa17.87■□□□□ 0.45
MSH5-209ENST00000450148 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
MSH5-209ENST00000450148 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
MSH5-209ENST00000450148 POLR3AO14802 1390 aaPredicted RBP17.84■□□□□ 0.45
MSH5-209ENST00000450148 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
MSH5-209ENST00000450148 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
MSH5-209ENST00000450148 NRAPQ86VF7 1730 aa17.84■□□□□ 0.45
MSH5-209ENST00000450148 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
MSH5-209ENST00000450148 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
MSH5-209ENST00000450148 GJD4Q96KN9 370 aaPredicted RBP17.83■□□□□ 0.44
MSH5-209ENST00000450148 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
MSH5-209ENST00000450148 CCDC61Q9Y6R9 512 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms