RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 ADGRB1O14514 1584 aa22.54■■□□□ 1.2
TOP3B-211ENST00000449704 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.53■■□□□ 1.2
TOP3B-211ENST00000449704 NBPF8Q3BBV2 869 aa22.49■■□□□ 1.19
TOP3B-211ENST00000449704 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
TOP3B-211ENST00000449704 MST1RQ04912 1400 aa22.48■■□□□ 1.19
TOP3B-211ENST00000449704 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
TOP3B-211ENST00000449704 NUTM2FA1L443 756 aa22.46■■□□□ 1.19
TOP3B-211ENST00000449704 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
TOP3B-211ENST00000449704 KNDC1Q76NI1 1749 aa22.45■■□□□ 1.19
TOP3B-211ENST00000449704 NALCNQ8IZF0 1738 aa22.45■■□□□ 1.19
TOP3B-211ENST00000449704 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
TOP3B-211ENST00000449704 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
TOP3B-211ENST00000449704 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
TOP3B-211ENST00000449704 ROBO1Q9Y6N7 1651 aa22.43■■□□□ 1.18
TOP3B-211ENST00000449704 ROCK2O75116 1388 aaKnown RBP22.43■■□□□ 1.18
TOP3B-211ENST00000449704 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
TOP3B-211ENST00000449704 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
TOP3B-211ENST00000449704 ESCO1Q5FWF5 840 aa22.4■■□□□ 1.18
TOP3B-211ENST00000449704 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
TOP3B-211ENST00000449704 DDX17Q92841 729 aaKnown RBP22.38■■□□□ 1.17
TOP3B-211ENST00000449704 TIMELESSQ9UNS1 1208 aa22.37■■□□□ 1.17
TOP3B-211ENST00000449704 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
TOP3B-211ENST00000449704 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
TOP3B-211ENST00000449704 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
TOP3B-211ENST00000449704 WASLO00401 505 aaPredicted RBP22.35■■□□□ 1.17
TOP3B-211ENST00000449704 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.17
TOP3B-211ENST00000449704 GPRASP1Q5JY77 1395 aa22.32■■□□□ 1.16
TOP3B-211ENST00000449704 FOXO3O43524 673 aa22.31■■□□□ 1.16
TOP3B-211ENST00000449704 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
TOP3B-211ENST00000449704 CDK19Q9BWU1 502 aa22.3■■□□□ 1.16
TOP3B-211ENST00000449704 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
TOP3B-211ENST00000449704 ARHGEF28Q8N1W1 1705 aaKnown RBP22.3■■□□□ 1.16
TOP3B-211ENST00000449704 EIF3AQ14152 1382 aaKnown RBP22.29■■□□□ 1.16
TOP3B-211ENST00000449704 PHLPP1O60346 1717 aa22.28■■□□□ 1.16
TOP3B-211ENST00000449704 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
TOP3B-211ENST00000449704 NPHP3Q7Z494 1330 aa22.28■■□□□ 1.16
TOP3B-211ENST00000449704 JCADQ9P266 1359 aa22.27■■□□□ 1.16
TOP3B-211ENST00000449704 XPCQ01831 940 aaPredicted RBP22.27■■□□□ 1.16
TOP3B-211ENST00000449704 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
TOP3B-211ENST00000449704 PRR36Q9H6K5 1346 aa22.27■■□□□ 1.16
TOP3B-211ENST00000449704 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
TOP3B-211ENST00000449704 ANKARQ7Z5J8 1434 aa22.26■■□□□ 1.15
TOP3B-211ENST00000449704 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
TOP3B-211ENST00000449704 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
TOP3B-211ENST00000449704 FMN2Q9NZ56 1722 aa22.26■■□□□ 1.15
TOP3B-211ENST00000449704 SRPK2P78362 688 aaKnown RBP22.25■■□□□ 1.15
TOP3B-211ENST00000449704 SOS2Q07890 1332 aaPredicted RBP22.24■■□□□ 1.15
TOP3B-211ENST00000449704 CABP2Q9NPB3 220 aa22.23■■□□□ 1.15
TOP3B-211ENST00000449704 COL16A1Q07092 1604 aaPredicted RBP22.23■■□□□ 1.15
TOP3B-211ENST00000449704 KRT28Q7Z3Y7 464 aa22.22■■□□□ 1.15
TOP3B-211ENST00000449704 TULP4Q9NRJ4 1543 aa22.21■■□□□ 1.15
TOP3B-211ENST00000449704 PSME1Q06323 249 aa22.21■■□□□ 1.15
TOP3B-211ENST00000449704 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
TOP3B-211ENST00000449704 NGDNQ8NEJ9 315 aaKnown RBP22.2■■□□□ 1.14
TOP3B-211ENST00000449704 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.14
TOP3B-211ENST00000449704 CCDC61Q9Y6R9 512 aa22.19■■□□□ 1.14
TOP3B-211ENST00000449704 NUTM2BA6NNL0 878 aaPredicted RBP22.18■■□□□ 1.14
TOP3B-211ENST00000449704 NUTM2EB1AL46 878 aaPredicted RBP22.18■■□□□ 1.14
TOP3B-211ENST00000449704 NUTM2AQ8IVF1 878 aaPredicted RBP22.18■■□□□ 1.14
TOP3B-211ENST00000449704 SPATA31A6Q5VVP1 1343 aa22.17■■□□□ 1.14
TOP3B-211ENST00000449704 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
TOP3B-211ENST00000449704 PNPLA6Q8IY17 1366 aa22.16■■□□□ 1.14
TOP3B-211ENST00000449704 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
TOP3B-211ENST00000449704 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
TOP3B-211ENST00000449704 ATP7BP35670 1465 aa22.15■■□□□ 1.14
TOP3B-211ENST00000449704 PXDNQ92626 1479 aa22.15■■□□□ 1.14
TOP3B-211ENST00000449704 QRICH2Q9H0J4 1663 aa22.15■■□□□ 1.14
TOP3B-211ENST00000449704 MEX3CQ5U5Q3 659 aaKnown RBP22.14■■□□□ 1.13
TOP3B-211ENST00000449704 KIF1AQ12756 1690 aa22.14■■□□□ 1.13
TOP3B-211ENST00000449704 LMOD2Q6P5Q4 547 aa22.13■■□□□ 1.13
TOP3B-211ENST00000449704 USP47Q96K76 1375 aa22.12■■□□□ 1.13
TOP3B-211ENST00000449704 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
TOP3B-211ENST00000449704 SPATA31A3Q5VYP0 1347 aa22.12■■□□□ 1.13
TOP3B-211ENST00000449704 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
TOP3B-211ENST00000449704 SBNO2Q9Y2G9 1366 aa22.12■■□□□ 1.13
TOP3B-211ENST00000449704 ACEP12821 1306 aa22.11■■□□□ 1.13
TOP3B-211ENST00000449704 CABP1Q9NZU7 370 aa22.11■■□□□ 1.13
TOP3B-211ENST00000449704 PAK3O75914 559 aaPredicted RBP22.1■■□□□ 1.13
TOP3B-211ENST00000449704 PLEKHG5O94827 1062 aa22.1■■□□□ 1.13
TOP3B-211ENST00000449704 PPIP5K1Q6PFW1 1433 aa22.1■■□□□ 1.13
TOP3B-211ENST00000449704 TESK2Q96S53 571 aa22.09■■□□□ 1.13
TOP3B-211ENST00000449704 SBNO1A3KN83 1393 aa22.09■■□□□ 1.13
TOP3B-211ENST00000449704 ADAMTS2O95450 1211 aa22.07■■□□□ 1.12
TOP3B-211ENST00000449704 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
TOP3B-211ENST00000449704 TNS3Q68CZ2 1445 aa22.06■■□□□ 1.12
TOP3B-211ENST00000449704 LRP6O75581 1613 aa22.06■■□□□ 1.12
TOP3B-211ENST00000449704 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
TOP3B-211ENST00000449704 ATAD2Q6PL18 1390 aa22.06■■□□□ 1.12
TOP3B-211ENST00000449704 POLR3AO14802 1390 aaPredicted RBP22.05■■□□□ 1.12
TOP3B-211ENST00000449704 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
TOP3B-211ENST00000449704 ARHGEF10O15013 1369 aa22.03■■□□□ 1.12
TOP3B-211ENST00000449704 HAP1P54257 671 aaPredicted RBP22.03■■□□□ 1.12
TOP3B-211ENST00000449704 TMF1P82094 1093 aa22.03■■□□□ 1.12
TOP3B-211ENST00000449704 CABLES1Q8TDN4 633 aa22.02■■□□□ 1.12
TOP3B-211ENST00000449704 C8orf37Q96NL8 207 aa22.02■■□□□ 1.12
TOP3B-211ENST00000449704 ITSN1Q15811 1721 aa22.01■■□□□ 1.11
TOP3B-211ENST00000449704 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
TOP3B-211ENST00000449704 RGS17Q9UGC6 210 aaPredicted RBP22.01■■□□□ 1.11
TOP3B-211ENST00000449704 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
TOP3B-211ENST00000449704 TOPAZ1Q8N9V7 1692 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms