RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
SEC22C-209ENST00000449617 CFAP70Q5T0N1 1121 aa19.2■□□□□ 0.66
SEC22C-209ENST00000449617 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
SEC22C-209ENST00000449617 ORAI2Q96SN7 254 aa19.18■□□□□ 0.66
SEC22C-209ENST00000449617 DHX57Q6P158 1386 aaKnown RBP19.17■□□□□ 0.66
SEC22C-209ENST00000449617 POTEAQ6S8J7 498 aa19.17■□□□□ 0.66
SEC22C-209ENST00000449617 MEX3CQ5U5Q3 659 aaKnown RBP19.16■□□□□ 0.66
SEC22C-209ENST00000449617 LRRC59Q96AG4 307 aaKnown RBP19.16■□□□□ 0.66
SEC22C-209ENST00000449617 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
SEC22C-209ENST00000449617 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
SEC22C-209ENST00000449617 ADGRB1O14514 1584 aa19.14■□□□□ 0.66
SEC22C-209ENST00000449617 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
SEC22C-209ENST00000449617 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.65
SEC22C-209ENST00000449617 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
SEC22C-209ENST00000449617 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
SEC22C-209ENST00000449617 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
SEC22C-209ENST00000449617 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
SEC22C-209ENST00000449617 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
SEC22C-209ENST00000449617 ESCO1Q5FWF5 840 aa19.12■□□□□ 0.65
SEC22C-209ENST00000449617 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
SEC22C-209ENST00000449617 NUTM2FA1L443 756 aa19.11■□□□□ 0.65
SEC22C-209ENST00000449617 PRAM1Q96QH2 718 aa19.09■□□□□ 0.65
SEC22C-209ENST00000449617 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.65
SEC22C-209ENST00000449617 PXDNQ92626 1479 aa19.08■□□□□ 0.64
SEC22C-209ENST00000449617 NPHP3Q7Z494 1330 aa19.08■□□□□ 0.64
SEC22C-209ENST00000449617 STAC3Q96MF2 364 aa19.08■□□□□ 0.64
SEC22C-209ENST00000449617 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
SEC22C-209ENST00000449617 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
SEC22C-209ENST00000449617 FOXO3O43524 673 aa19.06■□□□□ 0.64
SEC22C-209ENST00000449617 POGKQ9P215 609 aa19.06■□□□□ 0.64
SEC22C-209ENST00000449617 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
SEC22C-209ENST00000449617 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
SEC22C-209ENST00000449617 ZNF772Q68DY9 489 aaPredicted RBP19.05■□□□□ 0.64
SEC22C-209ENST00000449617 COL22A1Q8NFW1 1626 aaPredicted RBP19.05■□□□□ 0.64
SEC22C-209ENST00000449617 ADGRB2O60241 1585 aa19.04■□□□□ 0.64
SEC22C-209ENST00000449617 AFF2P51816 1311 aa19.03■□□□□ 0.64
SEC22C-209ENST00000449617 ARHGEF28Q8N1W1 1705 aaKnown RBP19.02■□□□□ 0.64
SEC22C-209ENST00000449617 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
SEC22C-209ENST00000449617 ADAMTS2O95450 1211 aa19■□□□□ 0.63
SEC22C-209ENST00000449617 USP32Q8NFA0 1604 aa19■□□□□ 0.63
SEC22C-209ENST00000449617 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
SEC22C-209ENST00000449617 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
SEC22C-209ENST00000449617 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
SEC22C-209ENST00000449617 ANKARQ7Z5J8 1434 aa18.99■□□□□ 0.63
SEC22C-209ENST00000449617 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
SEC22C-209ENST00000449617 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
SEC22C-209ENST00000449617 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
SEC22C-209ENST00000449617 NGLY1Q96IV0 654 aa18.95■□□□□ 0.62
SEC22C-209ENST00000449617 SPATA31A3Q5VYP0 1347 aa18.95■□□□□ 0.62
SEC22C-209ENST00000449617 RXRBP28702 533 aa18.94■□□□□ 0.62
SEC22C-209ENST00000449617 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
SEC22C-209ENST00000449617 MARF1Q9Y4F3 1742 aaKnown RBP18.94■□□□□ 0.62
SEC22C-209ENST00000449617 TNS3Q68CZ2 1445 aa18.93■□□□□ 0.62
SEC22C-209ENST00000449617 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
SEC22C-209ENST00000449617 WASLO00401 505 aaPredicted RBP18.92■□□□□ 0.62
SEC22C-209ENST00000449617 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
SEC22C-209ENST00000449617 SIN3AQ96ST3 1273 aa18.92■□□□□ 0.62
SEC22C-209ENST00000449617 NBPF1Q3BBV0 1214 aa18.91■□□□□ 0.62
SEC22C-209ENST00000449617 QTRT2Q9H974 415 aaKnown RBP18.91■□□□□ 0.62
SEC22C-209ENST00000449617 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
SEC22C-209ENST00000449617 PSME1Q06323 249 aa18.91■□□□□ 0.62
SEC22C-209ENST00000449617 L3MBTL2Q969R5 705 aa18.91■□□□□ 0.62
SEC22C-209ENST00000449617 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
SEC22C-209ENST00000449617 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-209ENST00000449617 USP21Q9UK80 565 aa18.89■□□□□ 0.61
SEC22C-209ENST00000449617 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
SEC22C-209ENST00000449617 TRPM3Q9HCF6 1732 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-209ENST00000449617 ATP7BP35670 1465 aa18.88■□□□□ 0.61
SEC22C-209ENST00000449617 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
SEC22C-209ENST00000449617 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
SEC22C-209ENST00000449617 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
SEC22C-209ENST00000449617 RGS12O14924 1447 aa18.87■□□□□ 0.61
SEC22C-209ENST00000449617 ARHGEF10O15013 1369 aa18.86■□□□□ 0.61
SEC22C-209ENST00000449617 LMOD2Q6P5Q4 547 aa18.85■□□□□ 0.61
SEC22C-209ENST00000449617 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
SEC22C-209ENST00000449617 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
SEC22C-209ENST00000449617 ALS2Q96Q42 1657 aa18.85■□□□□ 0.61
SEC22C-209ENST00000449617 ATRNO75882 1429 aa18.85■□□□□ 0.61
SEC22C-209ENST00000449617 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
SEC22C-209ENST00000449617 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
SEC22C-209ENST00000449617 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
SEC22C-209ENST00000449617 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
SEC22C-209ENST00000449617 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
SEC22C-209ENST00000449617 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
SEC22C-209ENST00000449617 CDK19Q9BWU1 502 aa18.83■□□□□ 0.61
SEC22C-209ENST00000449617 QRICH2Q9H0J4 1663 aa18.83■□□□□ 0.61
SEC22C-209ENST00000449617 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
SEC22C-209ENST00000449617 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.6
SEC22C-209ENST00000449617 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.82■□□□□ 0.6
SEC22C-209ENST00000449617 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
SEC22C-209ENST00000449617 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
SEC22C-209ENST00000449617 SLIT2O94813 1529 aa18.81■□□□□ 0.6
SEC22C-209ENST00000449617 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
SEC22C-209ENST00000449617 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.63e-7■□□□□ 10.1
SEC22C-209ENST00000449617 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
SEC22C-209ENST00000449617 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.6
SEC22C-209ENST00000449617 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.6
SEC22C-209ENST00000449617 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.6
SEC22C-209ENST00000449617 UNC5CLQ8IV45 518 aa18.76■□□□□ 0.59
SEC22C-209ENST00000449617 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms