RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
LSP1P3-201ENST00000449530 KIAA1210Q9ULL0 1709 aa17.33■□□□□ 0.37
LSP1P3-201ENST00000449530 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.36
LSP1P3-201ENST00000449530 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
LSP1P3-201ENST00000449530 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
LSP1P3-201ENST00000449530 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
LSP1P3-201ENST00000449530 ARHGEF28Q8N1W1 1705 aaKnown RBP17.31■□□□□ 0.36
LSP1P3-201ENST00000449530 BRINP3Q76B58 766 aa17.31■□□□□ 0.36
LSP1P3-201ENST00000449530 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
LSP1P3-201ENST00000449530 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
LSP1P3-201ENST00000449530 SHPRHQ149N8 1683 aa17.28■□□□□ 0.36
LSP1P3-201ENST00000449530 ADGRB2O60241 1585 aa17.27■□□□□ 0.35
LSP1P3-201ENST00000449530 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
LSP1P3-201ENST00000449530 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
LSP1P3-201ENST00000449530 PRAM1Q96QH2 718 aa17.26■□□□□ 0.35
LSP1P3-201ENST00000449530 JCADQ9P266 1359 aa17.25■□□□□ 0.35
LSP1P3-201ENST00000449530 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
LSP1P3-201ENST00000449530 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
LSP1P3-201ENST00000449530 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
LSP1P3-201ENST00000449530 TRPM1Q7Z4N2 1603 aa17.24■□□□□ 0.35
LSP1P3-201ENST00000449530 KIF1AQ12756 1690 aa17.23■□□□□ 0.35
LSP1P3-201ENST00000449530 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
LSP1P3-201ENST00000449530 POGKQ9P215 609 aa17.23■□□□□ 0.35
LSP1P3-201ENST00000449530 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
LSP1P3-201ENST00000449530 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
LSP1P3-201ENST00000449530 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
LSP1P3-201ENST00000449530 USP32Q8NFA0 1604 aa17.21■□□□□ 0.35
LSP1P3-201ENST00000449530 LRP6O75581 1613 aa17.19■□□□□ 0.34
LSP1P3-201ENST00000449530 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
LSP1P3-201ENST00000449530 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
LSP1P3-201ENST00000449530 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
LSP1P3-201ENST00000449530 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
LSP1P3-201ENST00000449530 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
LSP1P3-201ENST00000449530 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
LSP1P3-201ENST00000449530 PXDNQ92626 1479 aa17.17■□□□□ 0.34
LSP1P3-201ENST00000449530 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
LSP1P3-201ENST00000449530 TULP4Q9NRJ4 1543 aa17.16■□□□□ 0.34
LSP1P3-201ENST00000449530 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
LSP1P3-201ENST00000449530 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
LSP1P3-201ENST00000449530 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
LSP1P3-201ENST00000449530 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
LSP1P3-201ENST00000449530 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
LSP1P3-201ENST00000449530 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
LSP1P3-201ENST00000449530 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
LSP1P3-201ENST00000449530 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
LSP1P3-201ENST00000449530 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
LSP1P3-201ENST00000449530 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
LSP1P3-201ENST00000449530 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
LSP1P3-201ENST00000449530 ROCK2O75116 1388 aaKnown RBP17.12■□□□□ 0.33
LSP1P3-201ENST00000449530 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
LSP1P3-201ENST00000449530 FOXO3O43524 673 aa17.11■□□□□ 0.33
LSP1P3-201ENST00000449530 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
LSP1P3-201ENST00000449530 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
LSP1P3-201ENST00000449530 ATP7BP35670 1465 aa17.11■□□□□ 0.33
LSP1P3-201ENST00000449530 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
LSP1P3-201ENST00000449530 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
LSP1P3-201ENST00000449530 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
LSP1P3-201ENST00000449530 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
LSP1P3-201ENST00000449530 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
LSP1P3-201ENST00000449530 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
LSP1P3-201ENST00000449530 PRR36Q9H6K5 1346 aa17.09■□□□□ 0.33
LSP1P3-201ENST00000449530 RALGAPBQ86X10 1494 aa17.09■□□□□ 0.33
LSP1P3-201ENST00000449530 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
LSP1P3-201ENST00000449530 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
LSP1P3-201ENST00000449530 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
LSP1P3-201ENST00000449530 GPRASP1Q5JY77 1395 aa17.05■□□□□ 0.32
LSP1P3-201ENST00000449530 ABCA3Q99758 1704 aa17.05■□□□□ 0.32
LSP1P3-201ENST00000449530 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
LSP1P3-201ENST00000449530 RXRBP28702 533 aa17.05■□□□□ 0.32
LSP1P3-201ENST00000449530 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
LSP1P3-201ENST00000449530 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
LSP1P3-201ENST00000449530 KRT28Q7Z3Y7 464 aa17.03■□□□□ 0.32
LSP1P3-201ENST00000449530 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
LSP1P3-201ENST00000449530 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
LSP1P3-201ENST00000449530 NUDT16Q96DE0 195 aaKnown RBP17.02■□□□□ 0.32
LSP1P3-201ENST00000449530 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
LSP1P3-201ENST00000449530 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
LSP1P3-201ENST00000449530 ADAMTS2O95450 1211 aa17■□□□□ 0.31
LSP1P3-201ENST00000449530 PSME1Q06323 249 aa17■□□□□ 0.31
LSP1P3-201ENST00000449530 C8orf37Q96NL8 207 aa17■□□□□ 0.31
LSP1P3-201ENST00000449530 CARD11Q9BXL7 1154 aa17■□□□□ 0.31
LSP1P3-201ENST00000449530 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
LSP1P3-201ENST00000449530 AFF2P51816 1311 aa16.98■□□□□ 0.31
LSP1P3-201ENST00000449530 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
LSP1P3-201ENST00000449530 NGDNQ8NEJ9 315 aaKnown RBP16.98■□□□□ 0.31
LSP1P3-201ENST00000449530 PPIP5K1Q6PFW1 1433 aa16.97■□□□□ 0.31
LSP1P3-201ENST00000449530 CRYBG1Q9Y4K1 1723 aa16.97■□□□□ 0.31
LSP1P3-201ENST00000449530 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
LSP1P3-201ENST00000449530 CABP2Q9NPB3 220 aa16.97■□□□□ 0.31
LSP1P3-201ENST00000449530 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
LSP1P3-201ENST00000449530 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
LSP1P3-201ENST00000449530 EVC2Q86UK5 1308 aa16.96■□□□□ 0.3
LSP1P3-201ENST00000449530 POLR3AO14802 1390 aaPredicted RBP16.95■□□□□ 0.3
LSP1P3-201ENST00000449530 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
LSP1P3-201ENST00000449530 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
LSP1P3-201ENST00000449530 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
LSP1P3-201ENST00000449530 CDK12Q9NYV4 1490 aaPredicted RBP16.94■□□□□ 0.3
LSP1P3-201ENST00000449530 ACEP12821 1306 aa16.94■□□□□ 0.3
LSP1P3-201ENST00000449530 PHRF1Q9P1Y6 1649 aaKnown RBP16.93■□□□□ 0.3
LSP1P3-201ENST00000449530 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms