RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
PRDM15-208ENST00000449395 H3BQV1 296 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 AKNAQ7Z591 1439 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 RXRBP28702 533 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
PRDM15-208ENST00000449395 CABP4P57796 275 aa12.89□□□□□ -0.35
PRDM15-208ENST00000449395 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
PRDM15-208ENST00000449395 APAF1O14727 1248 aa12.89□□□□□ -0.35
PRDM15-208ENST00000449395 FYB1O15117 783 aa12.89□□□□□ -0.35
PRDM15-208ENST00000449395 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
PRDM15-208ENST00000449395 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
PRDM15-208ENST00000449395 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
PRDM15-208ENST00000449395 FOXO3O43524 673 aa12.88□□□□□ -0.35
PRDM15-208ENST00000449395 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
PRDM15-208ENST00000449395 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
PRDM15-208ENST00000449395 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
PRDM15-208ENST00000449395 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
PRDM15-208ENST00000449395 IKQ13123 557 aaPredicted RBP12.87□□□□□ -0.35
PRDM15-208ENST00000449395 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
PRDM15-208ENST00000449395 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
PRDM15-208ENST00000449395 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
PRDM15-208ENST00000449395 GOLGA6L1Q8N7Z2 621 aa12.87□□□□□ -0.35
PRDM15-208ENST00000449395 EXOC5O00471 708 aa12.87□□□□□ -0.35
PRDM15-208ENST00000449395 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 TPM3P06753 285 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
PRDM15-208ENST00000449395 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
PRDM15-208ENST00000449395 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
PRDM15-208ENST00000449395 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
PRDM15-208ENST00000449395 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
PRDM15-208ENST00000449395 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 DDX19BQ9UMR2 479 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 ZNF408Q9H9D4 720 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 A0A0U1RQG5 324 aaPredicted RBP12.85□□□□□ -0.35
PRDM15-208ENST00000449395 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
PRDM15-208ENST00000449395 TPD52L1Q16890 204 aaPredicted RBP12.84□□□□□ -0.35
PRDM15-208ENST00000449395 USP21Q9UK80 565 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 PDE4CQ08493 712 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
PRDM15-208ENST00000449395 APBA3O96018 575 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
PRDM15-208ENST00000449395 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
PRDM15-208ENST00000449395 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.35
PRDM15-208ENST00000449395 RIPK4P57078 832 aa12.83□□□□□ -0.35
PRDM15-208ENST00000449395 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
PRDM15-208ENST00000449395 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
PRDM15-208ENST00000449395 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
PRDM15-208ENST00000449395 REC8O95072 547 aa12.82□□□□□ -0.36
PRDM15-208ENST00000449395 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
PRDM15-208ENST00000449395 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
PRDM15-208ENST00000449395 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
PRDM15-208ENST00000449395 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
PRDM15-208ENST00000449395 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
PRDM15-208ENST00000449395 GSE1Q14687 1217 aa12.82□□□□□ -0.36
PRDM15-208ENST00000449395 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
PRDM15-208ENST00000449395 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
PRDM15-208ENST00000449395 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
PRDM15-208ENST00000449395 BECN2A8MW95 431 aa12.81□□□□□ -0.36
PRDM15-208ENST00000449395 ZSCAN29Q8IWY8 852 aaPredicted RBP12.81□□□□□ -0.36
PRDM15-208ENST00000449395 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
PRDM15-208ENST00000449395 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
PRDM15-208ENST00000449395 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
PRDM15-208ENST00000449395 RFC4P35249 363 aa12.8□□□□□ -0.36
PRDM15-208ENST00000449395 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
PRDM15-208ENST00000449395 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
PRDM15-208ENST00000449395 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-208ENST00000449395 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
PRDM15-208ENST00000449395 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
PRDM15-208ENST00000449395 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
PRDM15-208ENST00000449395 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
PRDM15-208ENST00000449395 FBXO31Q5XUX0 539 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-208ENST00000449395 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
PRDM15-208ENST00000449395 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
PRDM15-208ENST00000449395 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
PRDM15-208ENST00000449395 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
PRDM15-208ENST00000449395 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
PRDM15-208ENST00000449395 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
PRDM15-208ENST00000449395 DDX58O95786 925 aaKnown RBP12.78□□□□□ -0.36
PRDM15-208ENST00000449395 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
PRDM15-208ENST00000449395 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.36
PRDM15-208ENST00000449395 TRIM29Q14134 588 aa12.77□□□□□ -0.36
PRDM15-208ENST00000449395 EAPPQ56P03 285 aaPredicted RBP12.77□□□□□ -0.36
PRDM15-208ENST00000449395 TPM2P07951 284 aa12.77□□□□□ -0.37
PRDM15-208ENST00000449395 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
PRDM15-208ENST00000449395 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms