RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
CCHCR1-206ENST00000448141 PRAM1Q96QH2 718 aa29.55■■■□□ 2.32
CCHCR1-206ENST00000448141 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
CCHCR1-206ENST00000448141 TRPM1Q7Z4N2 1603 aa29.53■■■□□ 2.32
CCHCR1-206ENST00000448141 NBPF1Q3BBV0 1214 aa29.53■■■□□ 2.32
CCHCR1-206ENST00000448141 SAFB2Q14151 953 aaKnown RBP eCLIP29.52■■■□□ 2.32
CCHCR1-206ENST00000448141 POGKQ9P215 609 aa29.52■■■□□ 2.32
CCHCR1-206ENST00000448141 PHLPP1O60346 1717 aa29.5■■■□□ 2.31
CCHCR1-206ENST00000448141 C1orf167Q5SNV9 1468 aa29.48■■■□□ 2.31
CCHCR1-206ENST00000448141 BRINP3Q76B58 766 aa29.48■■■□□ 2.31
CCHCR1-206ENST00000448141 FMN2Q9NZ56 1722 aa29.47■■■□□ 2.31
CCHCR1-206ENST00000448141 NBPF8Q3BBV2 869 aa29.45■■■□□ 2.31
CCHCR1-206ENST00000448141 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.3
CCHCR1-206ENST00000448141 AHDC1Q5TGY3 1603 aaPredicted RBP29.43■■■□□ 2.3
CCHCR1-206ENST00000448141 CCER1Q8TC90 406 aaPredicted RBP29.42■■■□□ 2.3
CCHCR1-206ENST00000448141 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
CCHCR1-206ENST00000448141 NUTM2FA1L443 756 aa29.41■■■□□ 2.3
CCHCR1-206ENST00000448141 COL16A1Q07092 1604 aaPredicted RBP29.41■■■□□ 2.3
CCHCR1-206ENST00000448141 NHSL1Q5SYE7 1610 aa29.41■■■□□ 2.3
CCHCR1-206ENST00000448141 ORAI2Q96SN7 254 aa29.4■■■□□ 2.3
CCHCR1-206ENST00000448141 MINK1Q8N4C8 1332 aaPredicted RBP29.4■■■□□ 2.3
CCHCR1-206ENST00000448141 ROCK2O75116 1388 aaKnown RBP29.39■■■□□ 2.3
CCHCR1-206ENST00000448141 HIRIP3Q9BW71 556 aaPredicted RBP29.39■■■□□ 2.3
CCHCR1-206ENST00000448141 RGPD8O14715 1765 aaPredicted RBP29.38■■■□□ 2.29
CCHCR1-206ENST00000448141 ESCO1Q5FWF5 840 aa29.34■■■□□ 2.29
CCHCR1-206ENST00000448141 DDX17Q92841 729 aaKnown RBP29.34■■■□□ 2.29
CCHCR1-206ENST00000448141 RALGAPBQ86X10 1494 aa29.34■■■□□ 2.29
CCHCR1-206ENST00000448141 QRICH2Q9H0J4 1663 aa29.33■■■□□ 2.29
CCHCR1-206ENST00000448141 USP32Q8NFA0 1604 aa29.31■■■□□ 2.28
CCHCR1-206ENST00000448141 GPRASP1Q5JY77 1395 aa29.3■■■□□ 2.28
CCHCR1-206ENST00000448141 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
CCHCR1-206ENST00000448141 KIF1AQ12756 1690 aa29.28■■■□□ 2.28
CCHCR1-206ENST00000448141 WASLO00401 505 aaPredicted RBP29.28■■■□□ 2.28
CCHCR1-206ENST00000448141 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
CCHCR1-206ENST00000448141 MED1Q15648 1581 aaPredicted RBP29.26■■■□□ 2.28
CCHCR1-206ENST00000448141 TULP4Q9NRJ4 1543 aa29.26■■■□□ 2.27
CCHCR1-206ENST00000448141 TIMELESSQ9UNS1 1208 aa29.26■■■□□ 2.27
CCHCR1-206ENST00000448141 EIF3AQ14152 1382 aaKnown RBP29.26■■■□□ 2.27
CCHCR1-206ENST00000448141 JCADQ9P266 1359 aa29.26■■■□□ 2.27
CCHCR1-206ENST00000448141 CARD11Q9BXL7 1154 aa29.25■■■□□ 2.27
CCHCR1-206ENST00000448141 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
CCHCR1-206ENST00000448141 FOXO3O43524 673 aa29.22■■■□□ 2.27
CCHCR1-206ENST00000448141 NPHP3Q7Z494 1330 aa29.21■■■□□ 2.27
CCHCR1-206ENST00000448141 PRR36Q9H6K5 1346 aa29.21■■■□□ 2.27
CCHCR1-206ENST00000448141 CDK19Q9BWU1 502 aa29.21■■■□□ 2.27
CCHCR1-206ENST00000448141 PHF8Q9UPP1 1060 aa29.21■■■□□ 2.27
CCHCR1-206ENST00000448141 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.27
CCHCR1-206ENST00000448141 ITSN1Q15811 1721 aa29.2■■■□□ 2.27
CCHCR1-206ENST00000448141 PXDNQ92626 1479 aa29.19■■■□□ 2.26
CCHCR1-206ENST00000448141 LRRC59Q96AG4 307 aaKnown RBP29.19■■■□□ 2.26
CCHCR1-206ENST00000448141 XPCQ01831 940 aaPredicted RBP29.18■■■□□ 2.26
CCHCR1-206ENST00000448141 ATP7BP35670 1465 aa29.17■■■□□ 2.26
CCHCR1-206ENST00000448141 DISP3Q9P2K9 1392 aa29.17■■■□□ 2.26
CCHCR1-206ENST00000448141 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
CCHCR1-206ENST00000448141 NUDT16Q96DE0 195 aaKnown RBP29.15■■■□□ 2.26
CCHCR1-206ENST00000448141 TOPAZ1Q8N9V7 1692 aa29.14■■■□□ 2.26
CCHCR1-206ENST00000448141 PNPLA6Q8IY17 1366 aa29.13■■■□□ 2.25
CCHCR1-206ENST00000448141 SRPK2P78362 688 aaKnown RBP29.12■■■□□ 2.25
CCHCR1-206ENST00000448141 SPATA31A6Q5VVP1 1343 aa29.12■■■□□ 2.25
CCHCR1-206ENST00000448141 KRT28Q7Z3Y7 464 aa29.1■■■□□ 2.25
CCHCR1-206ENST00000448141 CABP2Q9NPB3 220 aa29.09■■■□□ 2.25
CCHCR1-206ENST00000448141 EVC2Q86UK5 1308 aa29.09■■■□□ 2.25
CCHCR1-206ENST00000448141 LRP6O75581 1613 aa29.09■■■□□ 2.25
CCHCR1-206ENST00000448141 PSME1Q06323 249 aa29.08■■■□□ 2.25
CCHCR1-206ENST00000448141 SBNO2Q9Y2G9 1366 aa29.06■■■□□ 2.24
CCHCR1-206ENST00000448141 NUTM2BA6NNL0 878 aaPredicted RBP29.06■■■□□ 2.24
CCHCR1-206ENST00000448141 NUTM2EB1AL46 878 aaPredicted RBP29.06■■■□□ 2.24
CCHCR1-206ENST00000448141 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
CCHCR1-206ENST00000448141 CCDC61Q9Y6R9 512 aa29.06■■■□□ 2.24
CCHCR1-206ENST00000448141 COL22A1Q8NFW1 1626 aaPredicted RBP29.05■■■□□ 2.24
CCHCR1-206ENST00000448141 NGDNQ8NEJ9 315 aaKnown RBP29.05■■■□□ 2.24
CCHCR1-206ENST00000448141 PHF23Q9BUL5 403 aaPredicted RBP29.04■■■□□ 2.24
CCHCR1-206ENST00000448141 TRPM3Q9HCF6 1732 aaPredicted RBP29.03■■■□□ 2.24
CCHCR1-206ENST00000448141 SPATA31A3Q5VYP0 1347 aa29.03■■■□□ 2.24
CCHCR1-206ENST00000448141 TNS3Q68CZ2 1445 aa29.02■■■□□ 2.24
CCHCR1-206ENST00000448141 PPIP5K1Q6PFW1 1433 aa29.02■■■□□ 2.24
CCHCR1-206ENST00000448141 USP47Q96K76 1375 aa29.01■■■□□ 2.24
CCHCR1-206ENST00000448141 ST20-MTHFSA0A0A6YYL1 179 aa29.01■■■□□ 2.23
CCHCR1-206ENST00000448141 SBNO1A3KN83 1393 aa29.01■■■□□ 2.23
CCHCR1-206ENST00000448141 MEX3CQ5U5Q3 659 aaKnown RBP29■■■□□ 2.23
CCHCR1-206ENST00000448141 PLEKHG3A1L390 1219 aa28.99■■■□□ 2.23
CCHCR1-206ENST00000448141 ACEP12821 1306 aa28.98■■■□□ 2.23
CCHCR1-206ENST00000448141 POLR3AO14802 1390 aaPredicted RBP28.98■■■□□ 2.23
CCHCR1-206ENST00000448141 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
CCHCR1-206ENST00000448141 LMOD2Q6P5Q4 547 aa28.95■■■□□ 2.22
CCHCR1-206ENST00000448141 TESK2Q96S53 571 aa28.95■■■□□ 2.22
CCHCR1-206ENST00000448141 CABP1Q9NZU7 370 aa28.95■■■□□ 2.22
CCHCR1-206ENST00000448141 ARHGEF10O15013 1369 aa28.92■■■□□ 2.22
CCHCR1-206ENST00000448141 ATAD2Q6PL18 1390 aa28.92■■■□□ 2.22
CCHCR1-206ENST00000448141 PAK3O75914 559 aaPredicted RBP28.92■■■□□ 2.22
CCHCR1-206ENST00000448141 ADAMTS2O95450 1211 aa28.91■■■□□ 2.22
CCHCR1-206ENST00000448141 RGS17Q9UGC6 210 aaPredicted RBP28.91■■■□□ 2.22
CCHCR1-206ENST00000448141 PLEKHG5O94827 1062 aa28.9■■■□□ 2.22
CCHCR1-206ENST00000448141 ABCA3Q99758 1704 aa28.9■■■□□ 2.22
CCHCR1-206ENST00000448141 MARF1Q9Y4F3 1742 aaKnown RBP28.9■■■□□ 2.22
CCHCR1-206ENST00000448141 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
CCHCR1-206ENST00000448141 C8orf37Q96NL8 207 aa28.87■■■□□ 2.21
CCHCR1-206ENST00000448141 SLC24A1O60721 1099 aa28.86■■■□□ 2.21
CCHCR1-206ENST00000448141 CABLES1Q8TDN4 633 aa28.86■■■□□ 2.21
CCHCR1-206ENST00000448141 HAP1P54257 671 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms